RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 FAM71F2Q6NXP2 309 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 LYZL1Q6UWQ5 148 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 TMEM107Q6UX40 140 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 ASCL4Q6XD76 172 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 ERASQ7Z444 233 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 LYZL2Q7Z4W2 148 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 CYP4Z1Q86W10 505 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 NELFCDQ8IXH7 590 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 C10orf67Q8IYJ2 551 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR11H7Q8NGC8 314 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR4B1Q8NGF8 309 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR5AR1Q8NGP9 310 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR6K6Q8NGW6 343 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR8U1Q8NH10 309 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 CCDC110Q8TBZ0 833 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 MAGEE2Q8TD90 523 aaPredicted RBP-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 ACOT12Q8WYK0 555 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 ST8SIA4Q92187 359 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 H1FXQ92522 213 aaKnown RBP-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 NRGNQ92686 78 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 GNPNAT1Q96EK6 184 aaPredicted RBP-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 KCNS1Q96KK3 526 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 ZNF681Q96N22 645 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 MS4A4EQ96PG1 132 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR7D2Q96RA2 312 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 GINS4Q9BRT9 223 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 MRPL37Q9BZE1 423 aaKnown RBP-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 VCX2Q9H322 139 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 PSTPIP2Q9H939 334 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 VCX3AQ9NNX9 186 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 BIN3Q9NQY0 253 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 IL37Q9NZH6 218 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 TMOD2Q9NZR1 351 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 HMGXB4Q9UGU5 601 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 FAM153AQ9UHL3 310 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 AK3Q9UIJ7 227 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 PSMD13Q9UNM6 376 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 NUDCQ9Y266 331 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 SNX24Q9Y343 169 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 LRRC37A3O60309 1634 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 CCDC180Q9P1Z9 1646 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 CAMSAP2Q08AD1 1489 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 A0A087X0K7 114 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 LOC102723996A0A087X1L8 192 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 TRAV5A0A0B4J249 113 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 ATP6AP2A0A1C7CYW4 349 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 HMSDA8MTL9 139 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR11H12B2RN74 326 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 PDLIM1O00151 329 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 NDUFAB1O14561 156 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 CHST10O43529 356 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 COX7A2P2O60397 106 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR1I1O60431 355 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 GADD45GO95257 159 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 CYB5R3P00387 301 aaPredicted RBP-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 HLA-AP01891 365 aaKnown RBP-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 BGLAPP02818 100 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 LGALS2P05162 132 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 MSMBP08118 114 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 CALCBP10092 127 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 PORP16435 677 aaPredicted RBP-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 NPPCP23582 126 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 EEF1B2P24534 225 aaKnown RBP-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 CYB561P49447 251 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 PRLHRP49683 370 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 RGS4P49798 205 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 NPY4RP50391 375 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 KPNA2P52292 529 aaKnown RBP-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 BLVRAP53004 296 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 CLNS1AP54105 237 aaKnown RBP-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 ATP1B3P54709 279 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 CCL18P55774 89 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 RBM11P57052 281 aaKnown RBP-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 SYNJ2BPP57105 145 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 CXCR4P61073 352 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 RPS24P62847 133 aaKnown RBP-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 CDK5Q00535 292 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 CCDC173Q0VFZ6 552 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 PICALMQ13492 652 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 PON2Q15165 354 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 RAB35Q15286 201 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR1C1Q15619 314 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 MPV17L2Q567V2 206 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 OCIAD2Q56VL3 154 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 AKR1C8PQ5T2L2 129 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 SFXN4Q6P4A7 337 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 CYP4V2Q6ZWL3 525 aaPredicted RBP-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 BZW1Q7L1Q6 419 aaKnown RBP-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 MTERF4Q7Z6M4 381 aaKnown RBP-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 RBM45Q8IUH3 476 aaKnown RBP-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 HS3ST5Q8IZT8 346 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 MINDY1Q8N5J2 469 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 FAM216BQ8N7L0 139 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 C1orf131Q8NDD1 294 aaKnown RBP-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR11H1Q8NG94 326 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR7G1Q8NGA0 311 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR6M1Q8NGM8 313 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR9G1Q8NH87 305 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 KCNG3Q8TAE7 436 aa-2□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms