RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 CD40LGP29965 261 aa0.81□□□□□ -2.28
RNU6-39P-201ENST00000384344 CDK5R1Q15078 307 aa0.81□□□□□ -2.28
RNU6-39P-201ENST00000384344 LRRC75BQ2VPJ9 315 aa0.81□□□□□ -2.28
RNU6-39P-201ENST00000384344 DNM1P34Q6PK57 102 aa0.81□□□□□ -2.28
RNU6-39P-201ENST00000384344 RASSF6Q6ZTQ3 369 aa0.81□□□□□ -2.28
RNU6-39P-201ENST00000384344 PACRGLQ8N7B6 248 aa0.81□□□□□ -2.28
RNU6-39P-201ENST00000384344 SLC37A2Q8TED4 501 aa0.81□□□□□ -2.28
RNU6-39P-201ENST00000384344 RAB2BQ8WUD1 216 aa0.81□□□□□ -2.28
RNU6-39P-201ENST00000384344 SPACA1Q9HBV2 294 aa0.81□□□□□ -2.28
RNU6-39P-201ENST00000384344 XAGE1AQ9HD64 81 aa0.81□□□□□ -2.28
RNU6-39P-201ENST00000384344 ZFHX4Q86UP3 3567 aa0.81□□□□□ -2.28
RNU6-39P-201ENST00000384344 MAP1BP46821 2468 aaKnown RBP0.81□□□□□ -2.28
RNU6-39P-201ENST00000384344 SCN9AQ15858 1988 aa0.81□□□□□ -2.28
RNU6-39P-201ENST00000384344 CHD2O14647 1828 aaKnown RBP0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 TRAV7A0A075B6U4 112 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 TMEM269A0A1B0GVZ9 245 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 TRAPPC13A5PLN9 417 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 GOLGA6L10A6NI86 522 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 SMLR1H3BR10 107 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 H3BT86 120 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 LGALS1P09382 135 aaKnown RBP0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 HIST1H1CP16403 213 aaKnown RBP0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 CXCL3P19876 107 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 MSNP26038 577 aaKnown RBP0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 REG1BP48304 166 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 AQP4P55087 323 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 RAB14P61106 215 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 RPS24P62847 133 aaKnown RBP0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 Q1T7F1 81 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 GPHB5Q86YW7 130 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 RPP25LQ8N5L8 163 aaKnown RBP0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 JOSD2Q8TAC2 188 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 ASB13Q8WXK3 278 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 CCL13Q99616 98 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 DHRS9Q9BPW9 319 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 ADAT1Q9BUB4 502 aaKnown RBP0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 CHST6Q9GZX3 395 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 FKBP14Q9NWM8 211 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 HIVEP3Q5T1R4 2406 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 KIAA2026Q5HYC2 2103 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 RYR3Q15413 4870 aa0.8□□□□□ -2.28
RNU6-39P-201ENST00000384344 THSD7AQ9UPZ6 1657 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 DSTQ03001 7570 aaKnown RBP0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 TMED7-TICAM2A0A0A6YYA0 188 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 A0A0D9SEW6 157 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 HPGDSO60760 199 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 SCN2BO60939 215 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 OCMP0CE72 109 aaPredicted RBP0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 TRGC1P0CF51 173 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 RPL28P46779 137 aaKnown RBP0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 EMX1Q04741 257 aaPredicted RBP0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 JOSD1Q15040 202 aaPredicted RBP0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 MOGQ16653 247 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 NDUFA5Q16718 116 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 ARHGAP11BQ3KRB8 267 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 SLC51BQ86UW2 128 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 NAA40Q86UY6 237 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 CD302Q8IX05 232 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 RIBC1Q8N443 379 aaPredicted RBP0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 TBC1D19Q8N5T2 526 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 ACOT12Q8WYK0 555 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 RNASE6Q93091 150 aaKnown RBP0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 MS4A6AQ9H2W1 248 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 NAT8Q9UHE5 227 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 RBM7Q9Y580 266 aaKnown RBP0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 SSPOA2VEC9 5147 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 ZFYVE26Q68DK2 2539 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 USP9YO00507 2555 aaPredicted RBP0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 POLQO75417 2590 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 HERC1Q15751 4861 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 DSCAMO60469 2012 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 CCDC88CQ9P219 2028 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 NBEAL1Q6ZS30 2694 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 UBR5O95071 2799 aaPredicted RBP0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 MALRD1Q5VYJ5 2156 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 PKD1L1Q8TDX9 2849 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 SETBP1Q9Y6X0 1596 aa0.79□□□□□ -2.28
RNU6-39P-201ENST00000384344 CREBBPQ92793 2442 aa0.78□□□□□ -2.28
RNU6-39P-201ENST00000384344 LAMA2P24043 3122 aaKnown RBP0.78□□□□□ -2.28
RNU6-39P-201ENST00000384344 TTC28Q96AY4 2481 aa0.78□□□□□ -2.28
RNU6-39P-201ENST00000384344 MEIS3P1A6NDR6 274 aa0.78□□□□□ -2.28
RNU6-39P-201ENST00000384344 IQCF5A8MTL0 148 aa0.78□□□□□ -2.28
RNU6-39P-201ENST00000384344 PLA2G10O15496 165 aa0.78□□□□□ -2.28
RNU6-39P-201ENST00000384344 APOMO95445 188 aa0.78□□□□□ -2.28
RNU6-39P-201ENST00000384344 CDC34P49427 236 aaPredicted RBP0.78□□□□□ -2.28
RNU6-39P-201ENST00000384344 RPL30P62888 115 aaKnown RBP0.78□□□□□ -2.28
RNU6-39P-201ENST00000384344 SURF2Q15527 256 aaPredicted RBP0.78□□□□□ -2.28
RNU6-39P-201ENST00000384344 DEFB115Q30KQ5 88 aa0.78□□□□□ -2.28
RNU6-39P-201ENST00000384344 C5orf46Q6UWT4 87 aa0.78□□□□□ -2.28
RNU6-39P-201ENST00000384344 UBL4BQ8N7F7 174 aa0.78□□□□□ -2.28
RNU6-39P-201ENST00000384344 GNPNAT1Q96EK6 184 aaPredicted RBP0.78□□□□□ -2.28
RNU6-39P-201ENST00000384344 SNURFQ9Y675 71 aa0.78□□□□□ -2.28
RNU6-39P-201ENST00000384344 C2CD3Q4AC94 2353 aa0.78□□□□□ -2.28
RNU6-39P-201ENST00000384344 CEP295Q9C0D2 2601 aa0.78□□□□□ -2.29
RNU6-39P-201ENST00000384344 RNF213Q63HN8 5207 aa0.78□□□□□ -2.29
RNU6-39P-201ENST00000384344 REV3LO60673 3130 aa0.78□□□□□ -2.29
RNU6-39P-201ENST00000384344 CFAP46Q8IYW2 2715 aa0.77□□□□□ -2.29
RNU6-39P-201ENST00000384344 AKAP13Q12802 2813 aa0.77□□□□□ -2.29
RNU6-39P-201ENST00000384344 SZT2Q5T011 3432 aa0.77□□□□□ -2.29
RNU6-39P-201ENST00000384344 FAM25EA8MYX2 175 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms