RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 FAM131CQ96AQ9 280 aa11.94□□□□□ -0.5
SNPH-201ENST00000381867 CCL13Q99616 98 aa11.94□□□□□ -0.5
SNPH-201ENST00000381867 CELA2AP08217 269 aa11.94□□□□□ -0.5
SNPH-201ENST00000381867 GCHFRP30047 84 aa11.94□□□□□ -0.5
SNPH-201ENST00000381867 ZNF658BQ4V348 819 aaPredicted RBP11.94□□□□□ -0.5
SNPH-201ENST00000381867 OR4D5Q8NGN0 318 aa11.94□□□□□ -0.5
SNPH-201ENST00000381867 AUP1Q9Y679 476 aa11.94□□□□□ -0.5
SNPH-201ENST00000381867 LOC101059948A0A1B0GTJ6 334 aa11.94□□□□□ -0.5
SNPH-201ENST00000381867 LOXL3P58215 753 aa11.94□□□□□ -0.5
SNPH-201ENST00000381867 CENPWQ5EE01 88 aa11.94□□□□□ -0.5
SNPH-201ENST00000381867 ZCCHC14Q8WYQ9 949 aaKnown RBP11.94□□□□□ -0.5
SNPH-201ENST00000381867 ZDHHC8Q9ULC8 765 aa11.94□□□□□ -0.5
SNPH-201ENST00000381867 CTSSP25774 331 aa11.93□□□□□ -0.5
SNPH-201ENST00000381867 RSPO4Q2I0M5 234 aaPredicted RBP11.93□□□□□ -0.5
SNPH-201ENST00000381867 WDYHV1Q96HA8 205 aa11.93□□□□□ -0.5
SNPH-201ENST00000381867 GPHA2Q96T91 129 aa11.93□□□□□ -0.5
SNPH-201ENST00000381867 MYOFQ9NZM1 2061 aa11.93□□□□□ -0.5
SNPH-201ENST00000381867 C17orf51A8MQB3 221 aa11.93□□□□□ -0.5
SNPH-201ENST00000381867 SLC25A17O43808 307 aa11.93□□□□□ -0.5
SNPH-201ENST00000381867 S1PR2O95136 353 aa11.93□□□□□ -0.5
SNPH-201ENST00000381867 PRSS2P07478 247 aa11.93□□□□□ -0.5
SNPH-201ENST00000381867 KLRB1Q12918 225 aa11.93□□□□□ -0.5
SNPH-201ENST00000381867 STPG3Q8N7X2 389 aa11.93□□□□□ -0.5
SNPH-201ENST00000381867 OR51G1Q8NGK1 321 aa11.93□□□□□ -0.5
SNPH-201ENST00000381867 METTL26Q96S19 204 aa11.93□□□□□ -0.5
SNPH-201ENST00000381867 SS18L1O75177 396 aaPredicted RBP11.93□□□□□ -0.5
SNPH-201ENST00000381867 ADRA2AP08913 450 aa11.93□□□□□ -0.5
SNPH-201ENST00000381867 A0A087WWC5 75 aa11.93□□□□□ -0.5
SNPH-201ENST00000381867 GALNT14Q96FL9 552 aa11.93□□□□□ -0.5
SNPH-201ENST00000381867 FOXD3Q9UJU5 478 aaPredicted RBP11.93□□□□□ -0.5
SNPH-201ENST00000381867 TMEM56-RWDD3S4R434 201 aa11.93□□□□□ -0.5
SNPH-201ENST00000381867 PLXNA3P51805 1871 aa11.92□□□□□ -0.5
SNPH-201ENST00000381867 IGHMP01871 453 aa11.92□□□□□ -0.5
SNPH-201ENST00000381867 HOXA5P20719 270 aa11.92□□□□□ -0.5
SNPH-201ENST00000381867 CX3CL1P78423 397 aa11.92□□□□□ -0.5
SNPH-201ENST00000381867 SNAI3Q3KNW1 292 aa11.92□□□□□ -0.5
SNPH-201ENST00000381867 LINC01590Q5TEZ4 76 aa11.92□□□□□ -0.5
SNPH-201ENST00000381867 EBLN2Q6P2I7 272 aa11.92□□□□□ -0.5
SNPH-201ENST00000381867 NABP2Q9BQ15 211 aa11.92□□□□□ -0.5
SNPH-201ENST00000381867 STAG3L3P0CL85 134 aa11.92□□□□□ -0.5
SNPH-201ENST00000381867 COX5BP10606 129 aa11.92□□□□□ -0.5
SNPH-201ENST00000381867 CIRBPQ14011 172 aaKnown RBP11.92□□□□□ -0.5
SNPH-201ENST00000381867 NIT1Q86X76 327 aa11.92□□□□□ -0.5
SNPH-201ENST00000381867 RCC1LQ96I51 464 aaKnown RBP11.92□□□□□ -0.5
SNPH-201ENST00000381867 MRPS18CQ9Y3D5 142 aaKnown RBP11.92□□□□□ -0.5
SNPH-201ENST00000381867 C19orf67A6NJJ6 358 aa11.92□□□□□ -0.5
SNPH-201ENST00000381867 MRPL14Q6P1L8 145 aaKnown RBP11.92□□□□□ -0.5
SNPH-201ENST00000381867 TCF19Q9Y242 345 aa11.92□□□□□ -0.5
SNPH-201ENST00000381867 TANC1Q9C0D5 1861 aa11.92□□□□□ -0.5
SNPH-201ENST00000381867 J3QW42 95 aa11.92□□□□□ -0.5
SNPH-201ENST00000381867 LINC00469Q8N7U9 141 aa11.92□□□□□ -0.5
SNPH-201ENST00000381867 PHLDA3Q9Y5J5 127 aa11.92□□□□□ -0.5
SNPH-201ENST00000381867 LINC00587B1AMM8 73 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 SRP19P09132 144 aaKnown RBP11.91□□□□□ -0.5
SNPH-201ENST00000381867 CFHR1Q03591 330 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 ZFP36L1Q07352 338 aaKnown RBP11.91□□□□□ -0.5
SNPH-201ENST00000381867 CYP2G1PQ6ZSU1 146 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 ZNF414Q96IQ9 312 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 WNT5BQ9H1J7 359 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 PLSCR2Q9NRY7 297 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 RPRMQ9NS64 109 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 CALYQ9NYX4 217 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 IL36BQ9NZH7 164 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 A0A1W2PS18 150 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 ODAMA1E959 279 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 DLX6P56179 175 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 IDI2-AS1Q9NZ38 188 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 JPT1Q9UK76 154 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 TBL2Q9Y4P3 447 aaKnown RBP11.91□□□□□ -0.5
SNPH-201ENST00000381867 CABIN1Q9Y6J0 2220 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 TRAV30A0A087WSZ9 112 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 FCGR2BP31994 310 aaPredicted RBP11.91□□□□□ -0.5
SNPH-201ENST00000381867 TM4SF20Q53R12 229 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 SSBP3Q9BWW4 388 aaPredicted RBP11.91□□□□□ -0.5
SNPH-201ENST00000381867 WNT10AQ9GZT5 417 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 MSGN1A6NI15 193 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 OR11H12B2RN74 326 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 NTN3O00634 580 aaPredicted RBP11.91□□□□□ -0.5
SNPH-201ENST00000381867 C17orf82Q86X59 251 aaPredicted RBP11.91□□□□□ -0.5
SNPH-201ENST00000381867 OR11H1Q8NG94 326 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 OR11H2Q8NH07 326 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 LOC102723996A0A087X1L8 192 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 GDF9O60383 454 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 TSPAN13O95857 204 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 TEX29Q8N6K0 151 aa11.91□□□□□ -0.5
SNPH-201ENST00000381867 MBNL2Q5VZF2 373 aaKnown RBP11.9□□□□□ -0.5
SNPH-201ENST00000381867 IGHV3-72A0A0B4J1Y9 119 aa11.9□□□□□ -0.5
SNPH-201ENST00000381867 PRR19A6NJB7 356 aa11.9□□□□□ -0.5
SNPH-201ENST00000381867 C9orf172C9J069 976 aa11.9□□□□□ -0.5
SNPH-201ENST00000381867 UBE2L6O14933 153 aa11.9□□□□□ -0.5
SNPH-201ENST00000381867 TIAF1O95411 115 aa11.9□□□□□ -0.5
SNPH-201ENST00000381867 HIST1H1AQ02539 215 aaPredicted RBP11.9□□□□□ -0.5
SNPH-201ENST00000381867 EGR1P18146 543 aa11.9□□□□□ -0.5
SNPH-201ENST00000381867 MFAP4P55083 255 aa11.9□□□□□ -0.5
SNPH-201ENST00000381867 C14orf144Q96I85 54 aa11.9□□□□□ -0.5
SNPH-201ENST00000381867 MRPS16Q9Y3D3 137 aaKnown RBP11.9□□□□□ -0.5
SNPH-201ENST00000381867 UNC13CQ8NB66 2214 aa11.9□□□□□ -0.5
SNPH-201ENST00000381867 DOCK6Q96HP0 2047 aa11.9□□□□□ -0.5
SNPH-201ENST00000381867 TPRP12270 2363 aaKnown RBP11.9□□□□□ -0.5
SNPH-201ENST00000381867 IGKV1D-42A0A075B6H8 117 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms