RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 FAM209BQ5JX69 171 aa14.51□□□□□ -0.09
SGCB-201ENST00000381431 METTL1Q9UBP6 276 aaKnown RBP14.51□□□□□ -0.09
SGCB-201ENST00000381431 CXorf65A6NEN9 183 aa14.51□□□□□ -0.09
SGCB-201ENST00000381431 ZNF506Q5JVG8 444 aa14.51□□□□□ -0.09
SGCB-201ENST00000381431 LILRB1Q8NHL6 650 aaPredicted RBP14.51□□□□□ -0.09
SGCB-201ENST00000381431 PLPPR1Q8TBJ4 325 aa14.51□□□□□ -0.09
SGCB-201ENST00000381431 NABP2Q9BQ15 211 aa14.51□□□□□ -0.09
SGCB-201ENST00000381431 TXNDC17Q9BRA2 123 aa14.51□□□□□ -0.09
SGCB-201ENST00000381431 PSMG3Q9BT73 122 aaPredicted RBP14.51□□□□□ -0.09
SGCB-201ENST00000381431 UTRNP46939 3433 aa14.51□□□□□ -0.09
SGCB-201ENST00000381431 PINLYPA6NC86 204 aa14.51□□□□□ -0.09
SGCB-201ENST00000381431 SRP19P09132 144 aaKnown RBP14.51□□□□□ -0.09
SGCB-201ENST00000381431 CCL1P22362 96 aa14.51□□□□□ -0.09
SGCB-201ENST00000381431 CD40P25942 277 aa14.51□□□□□ -0.09
SGCB-201ENST00000381431 ACP7Q6ZNF0 438 aa14.51□□□□□ -0.09
SGCB-201ENST00000381431 A8MWL6 223 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 MMD2Q8IY49 270 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 DNAJC4Q9NNZ3 241 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 ZDHHC8Q9ULC8 765 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 THADAQ6YHU6 1953 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 NOTCH2Q04721 2471 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 IGLV3-32A0A0A0MS00 114 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 LOC105371267A0A1B0GV96 52 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 PQLC2LA1A4F0 135 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 C9orf172C9J069 976 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 C8orf88P0DMB2 117 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 TNFSF10P50591 281 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 ARF6P62330 175 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 FAM208BQ5VWN6 2430 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 IGHV3-35A0A0C4DH35 117 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 GPR6P46095 362 aaPredicted RBP14.5□□□□□ -0.09
SGCB-201ENST00000381431 LHX2P50458 406 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 PLAURQ03405 335 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 OR8A1Q8NGG7 326 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 SRP14P37108 136 aaKnown RBP14.5□□□□□ -0.09
SGCB-201ENST00000381431 TFF3Q07654 80 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 C17orf82Q86X59 251 aaPredicted RBP14.5□□□□□ -0.09
SGCB-201ENST00000381431 DOLPP1Q86YN1 238 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 FAM216BQ8N7L0 139 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 STPG3Q8N7X2 389 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 OR51M1Q9H341 326 aa14.5□□□□□ -0.09
SGCB-201ENST00000381431 IGHV1-2P23083 117 aa14.49□□□□□ -0.09
SGCB-201ENST00000381431 GLRXP35754 106 aa14.49□□□□□ -0.09
SGCB-201ENST00000381431 CLDN18P56856 261 aa14.49□□□□□ -0.09
SGCB-201ENST00000381431 PEAR1Q5VY43 1037 aaPredicted RBP14.49□□□□□ -0.09
SGCB-201ENST00000381431 ABLIM2Q6H8Q1 611 aa14.49□□□□□ -0.09
SGCB-201ENST00000381431 EIF4E3Q8N5X7 224 aaKnown RBP14.49□□□□□ -0.09
SGCB-201ENST00000381431 ELOVL1Q9BW60 279 aa14.49□□□□□ -0.09
SGCB-201ENST00000381431 SSBP3Q9BWW4 388 aaPredicted RBP14.49□□□□□ -0.09
SGCB-201ENST00000381431 ZNF430Q9H8G1 570 aaPredicted RBP14.49□□□□□ -0.09
SGCB-201ENST00000381431 TMEM250H0YL14 139 aa14.49□□□□□ -0.09
SGCB-201ENST00000381431 PTPRQQ9UMZ3 2332 aa14.49□□□□□ -0.09
SGCB-201ENST00000381431 CLPSP04118 112 aa14.49□□□□□ -0.09
SGCB-201ENST00000381431 SUPT4H1P63272 117 aaKnown RBP14.49□□□□□ -0.09
SGCB-201ENST00000381431 SNRNP40Q96DI7 357 aaKnown RBP14.49□□□□□ -0.09
SGCB-201ENST00000381431 GRAMD2BQ96HH9 432 aa14.49□□□□□ -0.09
SGCB-201ENST00000381431 MRPL18Q9H0U6 180 aaKnown RBP14.49□□□□□ -0.09
SGCB-201ENST00000381431 DLL1O00548 723 aa14.48□□□□□ -0.09
SGCB-201ENST00000381431 CA2P00918 260 aa14.48□□□□□ -0.09
SGCB-201ENST00000381431 HTN1P15515 57 aa14.48□□□□□ -0.09
SGCB-201ENST00000381431 C5orf24Q7Z6I8 188 aa14.48□□□□□ -0.09
SGCB-201ENST00000381431 NPCDR1Q9BY65 106 aa14.48□□□□□ -0.09
SGCB-201ENST00000381431 J3QW42 95 aa14.48□□□□□ -0.09
SGCB-201ENST00000381431 GTF2H5Q6ZYL4 71 aa14.48□□□□□ -0.09
SGCB-201ENST00000381431 SPSB4Q96A44 273 aa14.48□□□□□ -0.09
SGCB-201ENST00000381431 ZMAT5Q9UDW3 170 aaKnown RBP14.48□□□□□ -0.09
SGCB-201ENST00000381431 NOTCH4Q99466 2003 aa14.48□□□□□ -0.09
SGCB-201ENST00000381431 DOCK11Q5JSL3 2073 aa14.48□□□□□ -0.09
SGCB-201ENST00000381431 LOC389332A0A1B0GUA5 103 aa14.48□□□□□ -0.09
SGCB-201ENST00000381431 CD55P08174 381 aa14.48□□□□□ -0.09
SGCB-201ENST00000381431 LRRC75BQ2VPJ9 315 aa14.48□□□□□ -0.09
SGCB-201ENST00000381431 GBGT1Q8N5D6 347 aa14.48□□□□□ -0.09
SGCB-201ENST00000381431 MAP1LC3CQ9BXW4 147 aa14.48□□□□□ -0.09
SGCB-201ENST00000381431 ACACBO00763 2458 aa14.48□□□□□ -0.09
SGCB-201ENST00000381431 FAM166AQ6J272 317 aa14.48□□□□□ -0.09
SGCB-201ENST00000381431 DIRC2Q96SL1 478 aa14.48□□□□□ -0.09
SGCB-201ENST00000381431 CORTO00230 105 aa14.47□□□□□ -0.09
SGCB-201ENST00000381431 LDLRAD4O15165 306 aa14.47□□□□□ -0.09
SGCB-201ENST00000381431 CBLN1P23435 193 aa14.47□□□□□ -0.09
SGCB-201ENST00000381431 NRN1LQ496H8 165 aa14.47□□□□□ -0.09
SGCB-201ENST00000381431 TMEM105Q8N8V8 129 aa14.47□□□□□ -0.09
SGCB-201ENST00000381431 TMEM116Q8NCL8 245 aa14.47□□□□□ -0.09
SGCB-201ENST00000381431 GCHFRP30047 84 aa14.47□□□□□ -0.09
SGCB-201ENST00000381431 ERVFRD-1P60508 538 aa14.47□□□□□ -0.09
SGCB-201ENST00000381431 RPL30P62888 115 aaKnown RBP14.47□□□□□ -0.09
SGCB-201ENST00000381431 CCL20P78556 96 aa14.47□□□□□ -0.09
SGCB-201ENST00000381431 ZFP36L1Q07352 338 aaKnown RBP14.47□□□□□ -0.09
SGCB-201ENST00000381431 MUC15Q8N387 334 aa14.47□□□□□ -0.09
SGCB-201ENST00000381431 OR4C13Q8NGP0 309 aa14.47□□□□□ -0.09
SGCB-201ENST00000381431 SCNM1Q9BWG6 230 aa14.47□□□□□ -0.09
SGCB-201ENST00000381431 TRBV6-7A0A0A0MS04 114 aa14.47□□□□□ -0.09
SGCB-201ENST00000381431 FHL1Q13642 323 aa14.47□□□□□ -0.09
SGCB-201ENST00000381431 TMEM56-RWDD3S4R434 201 aa14.47□□□□□ -0.09
SGCB-201ENST00000381431 CACNA1AO00555 2505 aa14.47□□□□□ -0.09
SGCB-201ENST00000381431 PRR19A6NJB7 356 aa14.46□□□□□ -0.09
SGCB-201ENST00000381431 MT-ND6P03923 174 aa14.46□□□□□ -0.09
SGCB-201ENST00000381431 CD81P60033 236 aa14.46□□□□□ -0.09
SGCB-201ENST00000381431 ZNF525Q8N782 197 aa14.46□□□□□ -0.09
SGCB-201ENST00000381431 GUCD1Q96NT3 240 aa14.46□□□□□ -0.09
SGCB-201ENST00000381431 GGACTQ9BVM4 153 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms