RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 VSTM2AQ8TAG5 236 aa17.35■□□□□ 0.37
U2AF1-202ENST00000380276 EEF1AKMT3Q96AZ1 226 aa17.35■□□□□ 0.37
U2AF1-202ENST00000380276 OR2A7Q96R45 310 aa17.35■□□□□ 0.37
U2AF1-202ENST00000380276 GGTLC1Q9BX51 225 aa17.35■□□□□ 0.37
U2AF1-202ENST00000380276 DUSP21Q9H596 190 aa17.35■□□□□ 0.37
U2AF1-202ENST00000380276 SPATA2Q9UM82 520 aa17.35■□□□□ 0.37
U2AF1-202ENST00000380276 OR2W1Q9Y3N9 320 aa17.35■□□□□ 0.37
U2AF1-202ENST00000380276 DMRT1Q9Y5R6 373 aa17.35■□□□□ 0.37
U2AF1-202ENST00000380276 CXorf65A6NEN9 183 aa17.34■□□□□ 0.37
U2AF1-202ENST00000380276 KBTBD11O94819 623 aa17.34■□□□□ 0.37
U2AF1-202ENST00000380276 LY6G6CO95867 125 aa17.34■□□□□ 0.37
U2AF1-202ENST00000380276 RAB3BP20337 219 aa17.34■□□□□ 0.37
U2AF1-202ENST00000380276 Q6ZS49 121 aa17.34■□□□□ 0.37
U2AF1-202ENST00000380276 SSX9Q7RTT3 188 aa17.34■□□□□ 0.37
U2AF1-202ENST00000380276 ALMS1Q8TCU4 4167 aa17.34■□□□□ 0.37
U2AF1-202ENST00000380276 LOC102724200A0A096LPH7 203 aaPredicted RBP17.33■□□□□ 0.36
U2AF1-202ENST00000380276 SMIM30A4D0T7 59 aa17.33■□□□□ 0.36
U2AF1-202ENST00000380276 NPIPB5A8MRT5 1133 aa17.33■□□□□ 0.36
U2AF1-202ENST00000380276 DHFRP00374 187 aa17.33■□□□□ 0.36
U2AF1-202ENST00000380276 DEFA4P12838 97 aa17.33■□□□□ 0.36
U2AF1-202ENST00000380276 DTYMKP23919 212 aa17.33■□□□□ 0.36
U2AF1-202ENST00000380276 ARL6IP1Q15041 203 aa17.33■□□□□ 0.36
U2AF1-202ENST00000380276 CDNFQ49AH0 187 aa17.33■□□□□ 0.36
U2AF1-202ENST00000380276 BTNL8Q6UX41 500 aa17.33■□□□□ 0.36
U2AF1-202ENST00000380276 GPHB5Q86YW7 130 aa17.33■□□□□ 0.36
U2AF1-202ENST00000380276 UXS1Q8NBZ7 420 aa17.33■□□□□ 0.36
U2AF1-202ENST00000380276 CCDC140Q96MF4 163 aa17.33■□□□□ 0.36
U2AF1-202ENST00000380276 MLXQ9UH92 298 aa17.33■□□□□ 0.36
U2AF1-202ENST00000380276 TRAV1-2A0A0B4J238 106 aa17.32■□□□□ 0.36
U2AF1-202ENST00000380276 SLC22A5O76082 557 aa17.32■□□□□ 0.36
U2AF1-202ENST00000380276 REG1AP05451 166 aa17.32■□□□□ 0.36
U2AF1-202ENST00000380276 IL6RP08887 468 aaPredicted RBP17.32■□□□□ 0.36
U2AF1-202ENST00000380276 CTXN2P0C2S0 81 aa17.32■□□□□ 0.36
U2AF1-202ENST00000380276 AREGP15514 252 aa17.32■□□□□ 0.36
U2AF1-202ENST00000380276 PRSS48Q7RTY5 328 aa17.32■□□□□ 0.36
U2AF1-202ENST00000380276 LINC00476Q8WZB0 136 aa17.32■□□□□ 0.36
U2AF1-202ENST00000380276 SLC2A9Q9NRM0 540 aa17.32■□□□□ 0.36
U2AF1-202ENST00000380276 IGKV1D-13A0A0B4J2D9 117 aa17.31■□□□□ 0.36
U2AF1-202ENST00000380276 TMEM213A2RRL7 107 aa17.31■□□□□ 0.36
U2AF1-202ENST00000380276 E7EUB6 86 aa17.31■□□□□ 0.36
U2AF1-202ENST00000380276 HLA-DQB1P01920 261 aa17.31■□□□□ 0.36
U2AF1-202ENST00000380276 IGKV1-13P0DP09 117 aa17.31■□□□□ 0.36
U2AF1-202ENST00000380276 ANKRD55Q3KP44 614 aa17.31■□□□□ 0.36
U2AF1-202ENST00000380276 OR4A47Q6IF82 309 aa17.31■□□□□ 0.36
U2AF1-202ENST00000380276 TMEM167AQ8TBQ9 72 aa17.31■□□□□ 0.36
U2AF1-202ENST00000380276 NUDCD2Q8WVJ2 157 aa17.31■□□□□ 0.36
U2AF1-202ENST00000380276 FANCD2OSQ96PS1 177 aa17.31■□□□□ 0.36
U2AF1-202ENST00000380276 HSD17B10Q99714 261 aaKnown RBP17.31■□□□□ 0.36
U2AF1-202ENST00000380276 OVOL2Q9BRP0 275 aa17.31■□□□□ 0.36
U2AF1-202ENST00000380276 TAS2R8Q9NYW2 309 aa17.31■□□□□ 0.36
U2AF1-202ENST00000380276 MYOD1P15172 320 aa17.3■□□□□ 0.36
U2AF1-202ENST00000380276 PSMB6P28072 239 aa17.3■□□□□ 0.36
U2AF1-202ENST00000380276 MAS1LP35410 378 aa17.3■□□□□ 0.36
U2AF1-202ENST00000380276 SSX1Q16384 188 aa17.3■□□□□ 0.36
U2AF1-202ENST00000380276 RBPMS2Q6ZRY4 209 aaKnown RBP17.3■□□□□ 0.36
U2AF1-202ENST00000380276 ZNF367Q7RTV3 350 aa17.3■□□□□ 0.36
U2AF1-202ENST00000380276 PUSL1Q8N0Z8 303 aaKnown RBP17.3■□□□□ 0.36
U2AF1-202ENST00000380276 ZNF735P0CB33 412 aa17.29■□□□□ 0.36
U2AF1-202ENST00000380276 HIST1H1BP16401 226 aaKnown RBP17.29■□□□□ 0.36
U2AF1-202ENST00000380276 TM4SF20Q53R12 229 aa17.29■□□□□ 0.36
U2AF1-202ENST00000380276 GPHA2Q96T91 129 aa17.29■□□□□ 0.36
U2AF1-202ENST00000380276 A0A1B0GW64 132 aa17.28■□□□□ 0.36
U2AF1-202ENST00000380276 A8MWP6 167 aa17.28■□□□□ 0.36
U2AF1-202ENST00000380276 ANKRD65E5RJM6 399 aa17.28■□□□□ 0.36
U2AF1-202ENST00000380276 HRASP01112 189 aa17.28■□□□□ 0.36
U2AF1-202ENST00000380276 IGLV2-14P01704 120 aa17.28■□□□□ 0.36
U2AF1-202ENST00000380276 GNG2P59768 71 aa17.28■□□□□ 0.36
U2AF1-202ENST00000380276 RPL8P62917 257 aaKnown RBP17.28■□□□□ 0.36
U2AF1-202ENST00000380276 ZNF585BQ52M93 769 aa17.28■□□□□ 0.36
U2AF1-202ENST00000380276 HACD4Q5VWC8 232 aa17.28■□□□□ 0.36
U2AF1-202ENST00000380276 C22orf42Q6IC83 251 aa17.28■□□□□ 0.36
U2AF1-202ENST00000380276 CNIH2Q6PI25 160 aa17.28■□□□□ 0.36
U2AF1-202ENST00000380276 MFSD4AQ8N468 514 aa17.28■□□□□ 0.36
U2AF1-202ENST00000380276 OR1L6Q8NGR2 347 aa17.28■□□□□ 0.36
U2AF1-202ENST00000380276 HRASLSQ9HDD0 168 aa17.28■□□□□ 0.36
U2AF1-202ENST00000380276 IGHV3-35A0A0C4DH35 117 aa17.27■□□□□ 0.36
U2AF1-202ENST00000380276 TMEM235A6NFC5 223 aa17.27■□□□□ 0.36
U2AF1-202ENST00000380276 MFSD2BA6NFX1 497 aa17.27■□□□□ 0.36
U2AF1-202ENST00000380276 TNFSF12O43508 249 aa17.27■□□□□ 0.36
U2AF1-202ENST00000380276 CRYGCP07315 174 aa17.27■□□□□ 0.36
U2AF1-202ENST00000380276 CTRB1P17538 263 aa17.27■□□□□ 0.36
U2AF1-202ENST00000380276 GPR183P32249 361 aa17.27■□□□□ 0.36
U2AF1-202ENST00000380276 TBCEQ15813 527 aaPredicted RBP17.27■□□□□ 0.36
U2AF1-202ENST00000380276 CTRB2Q6GPI1 263 aa17.27■□□□□ 0.36
U2AF1-202ENST00000380276 CXorf58Q96LI9 332 aa17.27■□□□□ 0.36
U2AF1-202ENST00000380276 DCSTAMPQ9H295 470 aa17.27■□□□□ 0.36
U2AF1-202ENST00000380276 TRBV7-1A0A0A6YYK4 115 aa17.26■□□□□ 0.35
U2AF1-202ENST00000380276 A0A0J9YWU9 116 aa17.26■□□□□ 0.35
U2AF1-202ENST00000380276 CLEC3BP05452 202 aa17.26■□□□□ 0.35
U2AF1-202ENST00000380276 HLA-GP17693 338 aa17.26■□□□□ 0.35
U2AF1-202ENST00000380276 UNQ9165/PRO28630Q6UXU0 137 aa17.26■□□□□ 0.35
U2AF1-202ENST00000380276 NDUFB11Q9NX14 153 aa17.26■□□□□ 0.35
U2AF1-202ENST00000380276 UBQLN2Q9UHD9 624 aa17.26■□□□□ 0.35
U2AF1-202ENST00000380276 TRDV1A0A1B0GX56 115 aa17.25■□□□□ 0.35
U2AF1-202ENST00000380276 NUPR2A6NF83 97 aa17.25■□□□□ 0.35
U2AF1-202ENST00000380276 ZNF66Q6ZN08 573 aa17.25■□□□□ 0.35
U2AF1-202ENST00000380276 SECTM1Q8WVN6 248 aa17.25■□□□□ 0.35
U2AF1-202ENST00000380276 ANXA10Q9UJ72 324 aa17.25■□□□□ 0.35
U2AF1-202ENST00000380276 IGLV11-55A0A075B6I3 123 aa17.24■□□□□ 0.35
U2AF1-202ENST00000380276 ARPC4P59998 168 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms