RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 MOB3AQ96BX8 217 aa11.82□□□□□ -0.52
RAB4B-202ENST00000378307 OR2A7Q96R45 310 aa11.82□□□□□ -0.52
RAB4B-202ENST00000378307 ADAM30Q9UKF2 790 aa11.82□□□□□ -0.52
RAB4B-202ENST00000378307 C13orf42A0A1B0GVH6 325 aa11.81□□□□□ -0.52
RAB4B-202ENST00000378307 SMIM31A0A1B0GVY4 71 aa11.81□□□□□ -0.52
RAB4B-202ENST00000378307 CGB1A6NKQ9 187 aa11.81□□□□□ -0.52
RAB4B-202ENST00000378307 OR9G9P0C7N8 305 aa11.81□□□□□ -0.52
RAB4B-202ENST00000378307 HERV-K104P61576 105 aa11.81□□□□□ -0.52
RAB4B-202ENST00000378307 RNASE12Q5GAN4 147 aaKnown RBP11.81□□□□□ -0.52
RAB4B-202ENST00000378307 OR4A47Q6IF82 309 aa11.81□□□□□ -0.52
RAB4B-202ENST00000378307 TTC9CQ8N5M4 171 aa11.81□□□□□ -0.52
RAB4B-202ENST00000378307 MIXL1Q9H2W2 232 aa11.81□□□□□ -0.52
RAB4B-202ENST00000378307 FAM25AB3EWG3 89 aa11.8□□□□□ -0.52
RAB4B-202ENST00000378307 FAM25CB3EWG5 89 aa11.8□□□□□ -0.52
RAB4B-202ENST00000378307 FAM25GB3EWG6 89 aa11.8□□□□□ -0.52
RAB4B-202ENST00000378307 MPPED1O15442 326 aa11.8□□□□□ -0.52
RAB4B-202ENST00000378307 RBFOX2O43251 390 aaKnown RBP eCLIP11.8□□□□□ -0.525e-6■■■■□ 19.5
RAB4B-202ENST00000378307 PGLYRP1O75594 196 aaPredicted RBP11.8□□□□□ -0.52
RAB4B-202ENST00000378307 ACTL6BO94805 426 aa11.8□□□□□ -0.52
RAB4B-202ENST00000378307 S1PR2O95136 353 aa11.8□□□□□ -0.52
RAB4B-202ENST00000378307 HRASP01112 189 aa11.8□□□□□ -0.52
RAB4B-202ENST00000378307 KIR2DS2P43631 304 aa11.8□□□□□ -0.52
RAB4B-202ENST00000378307 TAS2R46P59540 309 aa11.8□□□□□ -0.52
RAB4B-202ENST00000378307 AADACL3Q5VUY0 350 aa11.8□□□□□ -0.52
RAB4B-202ENST00000378307 ZNF343Q6P1L6 599 aa11.8□□□□□ -0.52
RAB4B-202ENST00000378307 ACSM6Q6P461 480 aa11.8□□□□□ -0.52
RAB4B-202ENST00000378307 MZT2AQ6P582 158 aa11.8□□□□□ -0.52
RAB4B-202ENST00000378307 ABHD1Q96SE0 405 aa11.8□□□□□ -0.52
RAB4B-202ENST00000378307 SPIN2AQ99865 258 aa11.8□□□□□ -0.52
RAB4B-202ENST00000378307 SPIN2BQ9BPZ2 258 aa11.8□□□□□ -0.52
RAB4B-202ENST00000378307 SCPEP1Q9HB40 452 aa11.8□□□□□ -0.52
RAB4B-202ENST00000378307 AKIP1Q9NQ31 210 aa11.8□□□□□ -0.52
RAB4B-202ENST00000378307 LSM4Q9Y4Z0 139 aaKnown RBP11.8□□□□□ -0.52
RAB4B-202ENST00000378307 TRBV9A0A0B4J1U6 114 aa11.79□□□□□ -0.52
RAB4B-202ENST00000378307 A0A0G2JLM5 398 aa11.79□□□□□ -0.52
RAB4B-202ENST00000378307 SAP30O75446 220 aa11.79□□□□□ -0.52
RAB4B-202ENST00000378307 HPRT1P00492 218 aa11.79□□□□□ -0.52
RAB4B-202ENST00000378307 RLN1P04808 185 aa11.79□□□□□ -0.52
RAB4B-202ENST00000378307 ZNF735P0CB33 412 aa11.79□□□□□ -0.52
RAB4B-202ENST00000378307 RPA2P15927 270 aa11.79□□□□□ -0.52
RAB4B-202ENST00000378307 RPL27AP46776 148 aaKnown RBP11.79□□□□□ -0.52
RAB4B-202ENST00000378307 RHOGP84095 191 aa11.79□□□□□ -0.52
RAB4B-202ENST00000378307 CATR1Q13166 79 aa11.79□□□□□ -0.52
RAB4B-202ENST00000378307 HAPLN4Q86UW8 402 aa11.79□□□□□ -0.52
RAB4B-202ENST00000378307 CLVS1Q8IUQ0 354 aaPredicted RBP11.79□□□□□ -0.52
RAB4B-202ENST00000378307 OR6F1Q8NGZ6 308 aa11.79□□□□□ -0.52
RAB4B-202ENST00000378307 VSTM2AQ8TAG5 236 aa11.79□□□□□ -0.52
RAB4B-202ENST00000378307 FYTTD1Q96QD9 318 aaKnown RBP11.79□□□□□ -0.52
RAB4B-202ENST00000378307 RANGRFQ9HD47 186 aaPredicted RBP11.79□□□□□ -0.52
RAB4B-202ENST00000378307 BET1LQ9NYM9 111 aa11.79□□□□□ -0.52
RAB4B-202ENST00000378307 EXTL2Q9UBQ6 330 aa11.79□□□□□ -0.52
RAB4B-202ENST00000378307 KLK11Q9UBX7 282 aa11.79□□□□□ -0.52
RAB4B-202ENST00000378307 M0QYG6 137 aa11.78□□□□□ -0.52
RAB4B-202ENST00000378307 UPK2O00526 184 aa11.78□□□□□ -0.52
RAB4B-202ENST00000378307 CTDSP2O14595 271 aa11.78□□□□□ -0.52
RAB4B-202ENST00000378307 CREBL2O60519 120 aaPredicted RBP11.78□□□□□ -0.52
RAB4B-202ENST00000378307 AREGP15514 252 aa11.78□□□□□ -0.52
RAB4B-202ENST00000378307 INSL3P51460 131 aa11.78□□□□□ -0.52
RAB4B-202ENST00000378307 TAS2R31P59538 309 aa11.78□□□□□ -0.52
RAB4B-202ENST00000378307 RPL8P62917 257 aaKnown RBP11.78□□□□□ -0.52
RAB4B-202ENST00000378307 POU2AF1Q16633 256 aa11.78□□□□□ -0.52
RAB4B-202ENST00000378307 ZNF585BQ52M93 769 aa11.78□□□□□ -0.52
RAB4B-202ENST00000378307 ZNF429Q86V71 674 aa11.78□□□□□ -0.52
RAB4B-202ENST00000378307 OR52I2Q8NH67 350 aa11.78□□□□□ -0.52
RAB4B-202ENST00000378307 AP3S1Q92572 193 aa11.78□□□□□ -0.52
RAB4B-202ENST00000378307 USMG5Q96IX5 58 aa11.78□□□□□ -0.52
RAB4B-202ENST00000378307 PEF1Q9UBV8 284 aaKnown RBP11.78□□□□□ -0.52
RAB4B-202ENST00000378307 ZNF256Q9Y2P7 627 aaPredicted RBP11.78□□□□□ -0.52
RAB4B-202ENST00000378307 OR2J3O76001 311 aa11.77□□□□□ -0.53
RAB4B-202ENST00000378307 REG1AP05451 166 aa11.77□□□□□ -0.53
RAB4B-202ENST00000378307 NQO2P16083 231 aa11.77□□□□□ -0.53
RAB4B-202ENST00000378307 HLA-GP17693 338 aa11.77□□□□□ -0.53
RAB4B-202ENST00000378307 RCVRNP35243 200 aa11.77□□□□□ -0.53
RAB4B-202ENST00000378307 MAS1LP35410 378 aa11.77□□□□□ -0.53
RAB4B-202ENST00000378307 KLF5Q13887 457 aaPredicted RBP11.77□□□□□ -0.53
RAB4B-202ENST00000378307 PHLDA2Q53GA4 152 aa11.77□□□□□ -0.53
RAB4B-202ENST00000378307 IL34Q6ZMJ4 242 aa11.77□□□□□ -0.53
RAB4B-202ENST00000378307 LAX1Q8IWV1 398 aa11.77□□□□□ -0.53
RAB4B-202ENST00000378307 FCAMRQ8WWV6 532 aa11.77□□□□□ -0.53
RAB4B-202ENST00000378307 FANCD2OSQ96PS1 177 aa11.77□□□□□ -0.53
RAB4B-202ENST00000378307 PLEKHA2Q9HB19 425 aa11.77□□□□□ -0.53
RAB4B-202ENST00000378307 HRASLSQ9HDD0 168 aa11.77□□□□□ -0.53
RAB4B-202ENST00000378307 SLC2A9Q9NRM0 540 aa11.77□□□□□ -0.53
RAB4B-202ENST00000378307 TMEM140Q9NV12 185 aa11.77□□□□□ -0.53
RAB4B-202ENST00000378307 GPR31O00270 319 aa11.76□□□□□ -0.53
RAB4B-202ENST00000378307 CRYGCP07315 174 aa11.76□□□□□ -0.53
RAB4B-202ENST00000378307 SPNP16150 400 aa11.76□□□□□ -0.53
RAB4B-202ENST00000378307 F2RP25116 425 aa11.76□□□□□ -0.53
RAB4B-202ENST00000378307 LPAR6P43657 344 aa11.76□□□□□ -0.53
RAB4B-202ENST00000378307 SYNJ2BPP57105 145 aa11.76□□□□□ -0.53
RAB4B-202ENST00000378307 OR2B8PP59922 312 aa11.76□□□□□ -0.53
RAB4B-202ENST00000378307 TSPAN5P62079 268 aa11.76□□□□□ -0.53
RAB4B-202ENST00000378307 C11orf87Q6NUJ2 197 aa11.76□□□□□ -0.53
RAB4B-202ENST00000378307 OR4A5Q8NH83 315 aa11.76□□□□□ -0.53
RAB4B-202ENST00000378307 DYNC2LI1Q8TCX1 351 aa11.76□□□□□ -0.53
RAB4B-202ENST00000378307 DGCR14Q96DF8 476 aaKnown RBP11.76□□□□□ -0.53
RAB4B-202ENST00000378307 RSRP1Q9BUV0 290 aa11.76□□□□□ -0.53
RAB4B-202ENST00000378307 ZMAT5Q9UDW3 170 aaKnown RBP11.76□□□□□ -0.53
RAB4B-202ENST00000378307 DMRT1Q9Y5R6 373 aa11.76□□□□□ -0.53
RAB4B-202ENST00000378307 FAM223BA6NKX1 122 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms