RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 CYB561D1Q8N8Q1 229 aa16.57■□□□□ 0.24
PCDH8-202ENST00000377942 PI4KAP42356 2102 aa16.57■□□□□ 0.24
PCDH8-202ENST00000377942 PRR32B1ATL7 298 aa16.57■□□□□ 0.24
PCDH8-202ENST00000377942 AP4M1O00189 453 aa16.57■□□□□ 0.24
PCDH8-202ENST00000377942 ZNF250P15622 560 aa16.57■□□□□ 0.24
PCDH8-202ENST00000377942 PTTG1IPP53801 180 aa16.57■□□□□ 0.24
PCDH8-202ENST00000377942 FOXF2Q12947 444 aa16.57■□□□□ 0.24
PCDH8-202ENST00000377942 C12orf57Q99622 126 aa16.57■□□□□ 0.24
PCDH8-202ENST00000377942 IGHG3P01860 377 aa16.57■□□□□ 0.24
PCDH8-202ENST00000377942 HTN1P15515 57 aa16.57■□□□□ 0.24
PCDH8-202ENST00000377942 SNRPEP62304 92 aaKnown RBP16.57■□□□□ 0.24
PCDH8-202ENST00000377942 SPANXN1Q5VSR9 72 aa16.57■□□□□ 0.24
PCDH8-202ENST00000377942 NPIPB3Q92617 1050 aa16.57■□□□□ 0.24
PCDH8-202ENST00000377942 CENPVQ7Z7K6 275 aaPredicted RBP16.56■□□□□ 0.24
PCDH8-202ENST00000377942 EIF4E3Q8N5X7 224 aaKnown RBP16.56■□□□□ 0.24
PCDH8-202ENST00000377942 ZNF738Q8NE65 137 aa16.56■□□□□ 0.24
PCDH8-202ENST00000377942 PLPPR1Q8TBJ4 325 aa16.56■□□□□ 0.24
PCDH8-202ENST00000377942 WDR81Q562E7 1941 aa16.56■□□□□ 0.24
PCDH8-202ENST00000377942 NPPCP23582 126 aa16.56■□□□□ 0.24
PCDH8-202ENST00000377942 ZNF880Q6PDB4 577 aa16.56■□□□□ 0.24
PCDH8-202ENST00000377942 TMEM116Q8NCL8 245 aa16.56■□□□□ 0.24
PCDH8-202ENST00000377942 ISOC2Q96AB3 205 aa16.56■□□□□ 0.24
PCDH8-202ENST00000377942 ZNF319Q9P2F9 582 aa16.56■□□□□ 0.24
PCDH8-202ENST00000377942 NDUFB4O95168 129 aa16.56■□□□□ 0.24
PCDH8-202ENST00000377942 NAT1P18440 290 aa16.56■□□□□ 0.24
PCDH8-202ENST00000377942 PMS2P11Q13670 270 aa16.56■□□□□ 0.24
PCDH8-202ENST00000377942 SLC25A28Q96A46 364 aa16.56■□□□□ 0.24
PCDH8-202ENST00000377942 OR51M1Q9H341 326 aa16.56■□□□□ 0.24
PCDH8-202ENST00000377942 CCKARP32238 428 aa16.56■□□□□ 0.24
PCDH8-202ENST00000377942 MBNL2Q5VZF2 373 aaKnown RBP16.56■□□□□ 0.24
PCDH8-202ENST00000377942 COL4A6Q14031 1691 aa16.56■□□□□ 0.24
PCDH8-202ENST00000377942 TMEM189A5PLL7 270 aa16.55■□□□□ 0.24
PCDH8-202ENST00000377942 C1QL1O75973 258 aa16.55■□□□□ 0.24
PCDH8-202ENST00000377942 THBDP07204 575 aa16.55■□□□□ 0.24
PCDH8-202ENST00000377942 GUCA2BQ16661 112 aa16.55■□□□□ 0.24
PCDH8-202ENST00000377942 FGFBP3Q8TAT2 258 aa16.55■□□□□ 0.24
PCDH8-202ENST00000377942 NABP2Q9BQ15 211 aa16.55■□□□□ 0.24
PCDH8-202ENST00000377942 PLAUP00749 431 aa16.55■□□□□ 0.24
PCDH8-202ENST00000377942 ZNF137PP52743 207 aa16.55■□□□□ 0.24
PCDH8-202ENST00000377942 CA2P00918 260 aa16.55■□□□□ 0.24
PCDH8-202ENST00000377942 G0S2P27469 103 aa16.55■□□□□ 0.24
PCDH8-202ENST00000377942 UNQ6494/PRO21346Q6UXR6 183 aa16.55■□□□□ 0.24
PCDH8-202ENST00000377942 DCTN5Q9BTE1 182 aa16.55■□□□□ 0.24
PCDH8-202ENST00000377942 C17orf98A8MV24 154 aa16.55■□□□□ 0.24
PCDH8-202ENST00000377942 REG1AP05451 166 aa16.55■□□□□ 0.24
PCDH8-202ENST00000377942 CSN3P07498 182 aa16.55■□□□□ 0.24
PCDH8-202ENST00000377942 OR4A47Q6IF82 309 aa16.55■□□□□ 0.24
PCDH8-202ENST00000377942 WDFY1Q8IWB7 410 aa16.55■□□□□ 0.24
PCDH8-202ENST00000377942 C7orf69Q9H7B7 122 aa16.55■□□□□ 0.24
PCDH8-202ENST00000377942 MBD3L4A6NDZ8 208 aaPredicted RBP16.54■□□□□ 0.24
PCDH8-202ENST00000377942 MBD3L3A6NE82 208 aaPredicted RBP16.54■□□□□ 0.24
PCDH8-202ENST00000377942 MBD3L5A6NJ08 208 aaPredicted RBP16.54■□□□□ 0.24
PCDH8-202ENST00000377942 CDKN1AP38936 164 aa16.54■□□□□ 0.24
PCDH8-202ENST00000377942 HIST3H3Q16695 136 aa16.54■□□□□ 0.24
PCDH8-202ENST00000377942 MBD3L2Q8NHZ7 208 aaPredicted RBP16.54■□□□□ 0.24
PCDH8-202ENST00000377942 SNURFLB1AK76 121 aa16.54■□□□□ 0.24
PCDH8-202ENST00000377942 ZNF497Q6ZNH5 498 aa16.54■□□□□ 0.24
PCDH8-202ENST00000377942 RTBDNQ9BSG5 229 aaPredicted RBP16.54■□□□□ 0.24
PCDH8-202ENST00000377942 PARD6AQ9NPB6 346 aa16.54■□□□□ 0.24
PCDH8-202ENST00000377942 IGHV3OR16-10A0A075B7F0 116 aa16.54■□□□□ 0.24
PCDH8-202ENST00000377942 SGMS2Q8NHU3 365 aa16.54■□□□□ 0.24
PCDH8-202ENST00000377942 FBXL15Q9H469 300 aa16.54■□□□□ 0.24
PCDH8-202ENST00000377942 AUP1Q9Y679 476 aa16.54■□□□□ 0.24
PCDH8-202ENST00000377942 A0A0G2JLM5 398 aa16.54■□□□□ 0.24
PCDH8-202ENST00000377942 M0R2Z0 102 aa16.54■□□□□ 0.24
PCDH8-202ENST00000377942 MOSP00540 346 aa16.54■□□□□ 0.24
PCDH8-202ENST00000377942 PRSS1P07477 247 aa16.54■□□□□ 0.24
PCDH8-202ENST00000377942 DANCRP0C864 163 aa16.54■□□□□ 0.24
PCDH8-202ENST00000377942 CBLN2Q8IUK8 224 aa16.54■□□□□ 0.24
PCDH8-202ENST00000377942 SPSB4Q96A44 273 aa16.54■□□□□ 0.24
PCDH8-202ENST00000377942 IFI27L2Q9H2X8 130 aa16.54■□□□□ 0.24
PCDH8-202ENST00000377942 ZNF318Q5VUA4 2279 aa16.53■□□□□ 0.24
PCDH8-202ENST00000377942 IER3P46695 156 aa16.53■□□□□ 0.24
PCDH8-202ENST00000377942 GLRX5Q86SX6 157 aa16.53■□□□□ 0.24
PCDH8-202ENST00000377942 INTS1Q8N201 2190 aaKnown RBP16.53■□□□□ 0.24
PCDH8-202ENST00000377942 PROB1E7EW31 1015 aa16.53■□□□□ 0.24
PCDH8-202ENST00000377942 TFPI2P48307 235 aa16.53■□□□□ 0.24
PCDH8-202ENST00000377942 TMEM191AQ9H0A3 160 aa16.53■□□□□ 0.24
PCDH8-202ENST00000377942 HSPB7Q9UBY9 170 aa16.53■□□□□ 0.24
PCDH8-202ENST00000377942 TMSB15BA0A087X1C1 80 aa16.53■□□□□ 0.24
PCDH8-202ENST00000377942 IGKV1D-33P01593 117 aa16.53■□□□□ 0.24
PCDH8-202ENST00000377942 IGKV1-33P01594 117 aa16.53■□□□□ 0.24
PCDH8-202ENST00000377942 APCSP02743 223 aa16.53■□□□□ 0.24
PCDH8-202ENST00000377942 MT-ND6P03923 174 aa16.53■□□□□ 0.24
PCDH8-202ENST00000377942 PEAR1Q5VY43 1037 aaPredicted RBP16.53■□□□□ 0.24
PCDH8-202ENST00000377942 SMAGPQ0VAQ4 97 aa16.53■□□□□ 0.24
PCDH8-202ENST00000377942 NR2C2APQ86WQ0 139 aa16.53■□□□□ 0.24
PCDH8-202ENST00000377942 SLC25A33Q9BSK2 321 aa16.53■□□□□ 0.24
PCDH8-202ENST00000377942 KIF26BQ2KJY2 2108 aa16.53■□□□□ 0.24
PCDH8-202ENST00000377942 IGHV1-46P01743 117 aa16.52■□□□□ 0.24
PCDH8-202ENST00000377942 MGPP08493 103 aa16.52■□□□□ 0.24
PCDH8-202ENST00000377942 RPS20P60866 119 aaKnown RBP16.52■□□□□ 0.24
PCDH8-202ENST00000377942 ELOVL1Q9BW60 279 aa16.52■□□□□ 0.24
PCDH8-202ENST00000377942 HNRNPA3P51991 378 aaKnown RBP16.52■□□□□ 0.24
PCDH8-202ENST00000377942 FOXG1P55316 489 aaPredicted RBP16.52■□□□□ 0.24
PCDH8-202ENST00000377942 B3GALT5-AS1P59052 145 aa16.52■□□□□ 0.24
PCDH8-202ENST00000377942 TMEM183BQ1AE95 376 aa16.52■□□□□ 0.24
PCDH8-202ENST00000377942 MRPL20Q9BYC9 149 aaKnown RBP16.52■□□□□ 0.24
PCDH8-202ENST00000377942 TANC1Q9C0D5 1861 aa16.52■□□□□ 0.24
PCDH8-202ENST00000377942 PTBP3O95758 552 aaKnown RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms