RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 NDUFB4O95168 129 aa9.23□□□□□ -0.93
HIF3A-205ENST00000377670 HSPB1P04792 205 aaKnown RBP9.23□□□□□ -0.93
HIF3A-205ENST00000377670 RAB37Q96AX2 223 aa9.23□□□□□ -0.93
HIF3A-205ENST00000377670 OR2W1Q9Y3N9 320 aa9.23□□□□□ -0.93
HIF3A-205ENST00000377670 NBL1P41271 181 aa9.23□□□□□ -0.93
HIF3A-205ENST00000377670 OR4X1Q8NH49 305 aa9.23□□□□□ -0.93
HIF3A-205ENST00000377670 RTN4RQ9BZR6 473 aa9.23□□□□□ -0.93
HIF3A-205ENST00000377670 TMSB15BA0A087X1C1 80 aa9.23□□□□□ -0.93
HIF3A-205ENST00000377670 A0A0G2JLM5 398 aa9.23□□□□□ -0.93
HIF3A-205ENST00000377670 TRGC1P0CF51 173 aa9.23□□□□□ -0.93
HIF3A-205ENST00000377670 FABP2P12104 132 aa9.23□□□□□ -0.93
HIF3A-205ENST00000377670 HIST1H1BP16401 226 aaKnown RBP9.23□□□□□ -0.93
HIF3A-205ENST00000377670 IGKV3D-15A0A087WSY6 115 aa9.22□□□□□ -0.93
HIF3A-205ENST00000377670 J3QR06 171 aa9.22□□□□□ -0.93
HIF3A-205ENST00000377670 IGKV3-15P01624 115 aa9.22□□□□□ -0.93
HIF3A-205ENST00000377670 OTX1P32242 354 aaPredicted RBP9.22□□□□□ -0.93
HIF3A-205ENST00000377670 MFAP2P55001 183 aa9.22□□□□□ -0.93
HIF3A-205ENST00000377670 ZNF841Q6ZN19 808 aa9.22□□□□□ -0.93
HIF3A-205ENST00000377670 DNM1P46Q6ZS02 220 aa9.22□□□□□ -0.93
HIF3A-205ENST00000377670 MYOZ3Q8TDC0 251 aa9.22□□□□□ -0.93
HIF3A-205ENST00000377670 FBLIM1Q8WUP2 373 aa9.22□□□□□ -0.93
HIF3A-205ENST00000377670 CEBPDP49716 269 aaPredicted RBP9.22□□□□□ -0.93
HIF3A-205ENST00000377670 ZFP36L1Q07352 338 aaKnown RBP9.22□□□□□ -0.93
HIF3A-205ENST00000377670 C9orf106Q8NAJ2 232 aa9.22□□□□□ -0.93
HIF3A-205ENST00000377670 SOSTQ9BQB4 213 aa9.22□□□□□ -0.93
HIF3A-205ENST00000377670 ZBTB34Q8NCN2 500 aa9.22□□□□□ -0.93
HIF3A-205ENST00000377670 ITLN2Q8WWU7 325 aaPredicted RBP9.22□□□□□ -0.93
HIF3A-205ENST00000377670 CHRNA10Q9GZZ6 450 aa9.22□□□□□ -0.93
HIF3A-205ENST00000377670 GSN-AS1Q9NRJ2 163 aa9.22□□□□□ -0.93
HIF3A-205ENST00000377670 PQLC2LA1A4F0 135 aa9.22□□□□□ -0.93
HIF3A-205ENST00000377670 OR2A4O95047 310 aa9.22□□□□□ -0.93
HIF3A-205ENST00000377670 NPY1RP25929 384 aa9.22□□□□□ -0.93
HIF3A-205ENST00000377670 RELQ04864 619 aaPredicted RBP9.22□□□□□ -0.93
HIF3A-205ENST00000377670 OR2A7Q96R45 310 aa9.22□□□□□ -0.93
HIF3A-205ENST00000377670 CDC42EP3Q9UKI2 254 aa9.22□□□□□ -0.93
HIF3A-205ENST00000377670 PTPRDP23468 1912 aa9.22□□□□□ -0.93
HIF3A-205ENST00000377670 RPL36A-HNRNPH2H7BZ11 118 aa9.21□□□□□ -0.93
HIF3A-205ENST00000377670 AREGP15514 252 aa9.21□□□□□ -0.93
HIF3A-205ENST00000377670 TSPOP30536 169 aa9.21□□□□□ -0.93
HIF3A-205ENST00000377670 TEPPQ6URK8 271 aa9.21□□□□□ -0.93
HIF3A-205ENST00000377670 SYT8Q8NBV8 401 aa9.21□□□□□ -0.93
HIF3A-205ENST00000377670 MRPL18Q9H0U6 180 aaKnown RBP9.21□□□□□ -0.93
HIF3A-205ENST00000377670 SH3BGRL3Q9H299 93 aa9.21□□□□□ -0.93
HIF3A-205ENST00000377670 GCSHP23434 173 aa9.21□□□□□ -0.93
HIF3A-205ENST00000377670 CLDN18P56856 261 aa9.21□□□□□ -0.93
HIF3A-205ENST00000377670 IGLV3-21P80748 117 aaPredicted RBP9.21□□□□□ -0.93
HIF3A-205ENST00000377670 COLCA1Q6ZS62 124 aa9.21□□□□□ -0.93
HIF3A-205ENST00000377670 PRSS33Q8NF86 280 aa9.21□□□□□ -0.93
HIF3A-205ENST00000377670 K7ENP7 123 aa9.21□□□□□ -0.94
HIF3A-205ENST00000377670 HIGD1AQ9Y241 93 aa9.21□□□□□ -0.94
HIF3A-205ENST00000377670 DIDO1Q9BTC0 2240 aaKnown RBP9.21□□□□□ -0.94
HIF3A-205ENST00000377670 MFAP4P55083 255 aa9.21□□□□□ -0.94
HIF3A-205ENST00000377670 DLX1P56177 255 aa9.21□□□□□ -0.94
HIF3A-205ENST00000377670 RELBQ01201 579 aa9.21□□□□□ -0.94
HIF3A-205ENST00000377670 TMEM252Q8N6L7 170 aa9.21□□□□□ -0.94
HIF3A-205ENST00000377670 TMEM56-RWDD3S4R434 201 aa9.21□□□□□ -0.94
HIF3A-205ENST00000377670 CD74P04233 296 aa9.21□□□□□ -0.94
HIF3A-205ENST00000377670 FCGR3AP08637 254 aa9.21□□□□□ -0.94
HIF3A-205ENST00000377670 TAS2R60P59551 318 aa9.21□□□□□ -0.94
HIF3A-205ENST00000377670 SLC25A38Q96DW6 304 aa9.21□□□□□ -0.94
HIF3A-205ENST00000377670 CHST5Q9GZS9 411 aa9.21□□□□□ -0.94
HIF3A-205ENST00000377670 TUBD1Q9UJT1 453 aa9.21□□□□□ -0.94
HIF3A-205ENST00000377670 KIF26BQ2KJY2 2108 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 IGLV1-36A0A0B4J1U3 117 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 IGKV1D-43A0A0B4J1Z2 117 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 SNRPCP09234 159 aaKnown RBP9.2□□□□□ -0.94
HIF3A-205ENST00000377670 SNAI3Q3KNW1 292 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 DNLZQ5SXM8 178 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 ATOH7Q8N100 152 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 ARL6IP6Q8N6S5 226 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 CALYQ9NYX4 217 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 CECR9P0C854 216 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 SERF2P84101 59 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 TMEM78Q5T7P6 136 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 PRNTQ86SH4 94 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 PTX4Q96A99 478 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 PGLYRP3Q96LB9 341 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 P2RY4P51582 365 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 RND3P61587 244 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 VAX1Q5SQQ9 334 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 IL36RNQ9UBH0 155 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 LHFPL6Q9Y693 200 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 MYO7BQ6PIF6 2116 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 M0R3E3 92 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 NTN3O00634 580 aaPredicted RBP9.2□□□□□ -0.94
HIF3A-205ENST00000377670 KLF7O75840 302 aaPredicted RBP9.2□□□□□ -0.94
HIF3A-205ENST00000377670 MEF2BQ02080 365 aaPredicted RBP9.2□□□□□ -0.94
HIF3A-205ENST00000377670 PMCHL1Q16048 86 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 GBGT1Q8N5D6 347 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 DPM3Q9P2X0 92 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 ESPL1Q14674 2120 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 HBZP02008 142 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 CD1BP29016 333 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 EFNA4P52798 201 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 LRRC75BQ2VPJ9 315 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 Q71RC1 249 aaPredicted RBP9.2□□□□□ -0.94
HIF3A-205ENST00000377670 WDYHV1Q96HA8 205 aa9.2□□□□□ -0.94
HIF3A-205ENST00000377670 LOC107984156A0A0G2JMH3 177 aa9.19□□□□□ -0.94
HIF3A-205ENST00000377670 DHRS7CA6NNS2 312 aa9.19□□□□□ -0.94
HIF3A-205ENST00000377670 NPIPB11E5RHQ5 1161 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms