RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 TSPAN14Q8NG11 270 aa14.6□□□□□ -0.07
CBWD3-204ENST00000377349 ALMS1Q8TCU4 4167 aa14.6□□□□□ -0.07
CBWD3-204ENST00000377349 USMG5Q96IX5 58 aa14.6□□□□□ -0.07
CBWD3-204ENST00000377349 THAP7Q9BT49 309 aaPredicted RBP14.6□□□□□ -0.07
CBWD3-204ENST00000377349 SLC5A7Q9GZV3 580 aa14.6□□□□□ -0.07
CBWD3-204ENST00000377349 PALMDQ9NP74 551 aa14.6□□□□□ -0.07
CBWD3-204ENST00000377349 RBMXL2O75526 392 aaKnown RBP14.59□□□□□ -0.07
CBWD3-204ENST00000377349 OR2A4O95047 310 aa14.59□□□□□ -0.07
CBWD3-204ENST00000377349 ATP5G2Q06055 141 aa14.59□□□□□ -0.07
CBWD3-204ENST00000377349 KLF5Q13887 457 aaPredicted RBP14.59□□□□□ -0.07
CBWD3-204ENST00000377349 SAMD12Q8N8I0 201 aa14.59□□□□□ -0.07
CBWD3-204ENST00000377349 OR2A7Q96R45 310 aa14.59□□□□□ -0.07
CBWD3-204ENST00000377349 AKIP1Q9NQ31 210 aa14.59□□□□□ -0.07
CBWD3-204ENST00000377349 A0A0A6YYH2 397 aa14.58□□□□□ -0.07
CBWD3-204ENST00000377349 A6NJ64 397 aa14.58□□□□□ -0.07
CBWD3-204ENST00000377349 OR2J3O76001 311 aa14.58□□□□□ -0.07
CBWD3-204ENST00000377349 KBTBD11O94819 623 aa14.58□□□□□ -0.07
CBWD3-204ENST00000377349 PPYP01298 95 aa14.58□□□□□ -0.07
CBWD3-204ENST00000377349 TMEM69Q5SWH9 247 aa14.58□□□□□ -0.07
CBWD3-204ENST00000377349 C19orf35Q6ZS72 473 aa14.58□□□□□ -0.07
CBWD3-204ENST00000377349 OR9G4Q8NGQ1 327 aa14.58□□□□□ -0.07
CBWD3-204ENST00000377349 VSTM2AQ8TAG5 236 aa14.58□□□□□ -0.07
CBWD3-204ENST00000377349 S100A16Q96FQ6 103 aaKnown RBP14.58□□□□□ -0.07
CBWD3-204ENST00000377349 HRASLSQ9HDD0 168 aa14.58□□□□□ -0.07
CBWD3-204ENST00000377349 A0A087WXM4 84 aa14.58□□□□□ -0.08
CBWD3-204ENST00000377349 SULT1C2O00338 296 aa14.58□□□□□ -0.08
CBWD3-204ENST00000377349 TNFAIP8O95379 198 aa14.58□□□□□ -0.08
CBWD3-204ENST00000377349 RPL27AP46776 148 aaKnown RBP14.58□□□□□ -0.08
CBWD3-204ENST00000377349 HERV-K104P61576 105 aa14.58□□□□□ -0.08
CBWD3-204ENST00000377349 TATDN3Q17R31 274 aa14.58□□□□□ -0.08
CBWD3-204ENST00000377349 UBE2NLQ5JXB2 153 aa14.58□□□□□ -0.08
CBWD3-204ENST00000377349 ZNF343Q6P1L6 599 aa14.58□□□□□ -0.08
CBWD3-204ENST00000377349 ZNF66Q6ZN08 573 aa14.58□□□□□ -0.08
CBWD3-204ENST00000377349 SPAG16Q8N0X2 631 aa14.58□□□□□ -0.08
CBWD3-204ENST00000377349 OR51H1Q8NH63 302 aa14.58□□□□□ -0.08
CBWD3-204ENST00000377349 EHFQ9NZC4 300 aa14.58□□□□□ -0.08
CBWD3-204ENST00000377349 BRI3O95415 125 aa14.57□□□□□ -0.08
CBWD3-204ENST00000377349 HRASP01112 189 aa14.57□□□□□ -0.08
CBWD3-204ENST00000377349 RPS19P39019 145 aaKnown RBP14.57□□□□□ -0.08
CBWD3-204ENST00000377349 KIR2DS2P43631 304 aa14.57□□□□□ -0.08
CBWD3-204ENST00000377349 CBX5P45973 191 aa14.57□□□□□ -0.08
CBWD3-204ENST00000377349 ZNF45Q02386 682 aa14.57□□□□□ -0.08
CBWD3-204ENST00000377349 LCE2DQ5TA82 110 aaPredicted RBP14.57□□□□□ -0.08
CBWD3-204ENST00000377349 CROCCP3Q8IVE0 287 aa14.57□□□□□ -0.08
CBWD3-204ENST00000377349 SGPP2Q8IWX5 399 aa14.57□□□□□ -0.08
CBWD3-204ENST00000377349 SNAPC3Q92966 411 aa14.57□□□□□ -0.08
CBWD3-204ENST00000377349 ISOC1Q96CN7 298 aa14.57□□□□□ -0.08
CBWD3-204ENST00000377349 FAM223BA6NKX1 122 aa14.56□□□□□ -0.08
CBWD3-204ENST00000377349 IGHV3-23P01764 117 aa14.56□□□□□ -0.08
CBWD3-204ENST00000377349 REG1AP05451 166 aa14.56□□□□□ -0.08
CBWD3-204ENST00000377349 MYOD1P15172 320 aa14.56□□□□□ -0.08
CBWD3-204ENST00000377349 RPA2P15927 270 aa14.56□□□□□ -0.08
CBWD3-204ENST00000377349 CATR1Q13166 79 aa14.56□□□□□ -0.08
CBWD3-204ENST00000377349 EIF4EBP1Q13541 118 aaPredicted RBP14.56□□□□□ -0.08
CBWD3-204ENST00000377349 HAGHQ16775 308 aa14.56□□□□□ -0.08
CBWD3-204ENST00000377349 C15orf32Q32M92 178 aa14.56□□□□□ -0.08
CBWD3-204ENST00000377349 AADACL3Q5VUY0 350 aa14.56□□□□□ -0.08
CBWD3-204ENST00000377349 ADAMTSL5Q6ZMM2 481 aa14.56□□□□□ -0.08
CBWD3-204ENST00000377349 FAM223AQ8IWN6 122 aa14.56□□□□□ -0.08
CBWD3-204ENST00000377349 OR5AP2Q8NGF4 316 aa14.56□□□□□ -0.08
CBWD3-204ENST00000377349 YIPF6Q96EC8 236 aa14.56□□□□□ -0.08
CBWD3-204ENST00000377349 S4R3C0 116 aa14.56□□□□□ -0.08
CBWD3-204ENST00000377349 PPP5D1E7EU14 171 aa14.55□□□□□ -0.08
CBWD3-204ENST00000377349 XRCC3O43542 346 aa14.55□□□□□ -0.08
CBWD3-204ENST00000377349 PMP2P02689 132 aa14.55□□□□□ -0.08
CBWD3-204ENST00000377349 BRWD1-AS2P59051 145 aa14.55□□□□□ -0.08
CBWD3-204ENST00000377349 SLC25A42Q86VD7 318 aa14.55□□□□□ -0.08
CBWD3-204ENST00000377349 TMEM167AQ8TBQ9 72 aa14.55□□□□□ -0.08
CBWD3-204ENST00000377349 TEX22C9J3V5 150 aa14.54□□□□□ -0.08
CBWD3-204ENST00000377349 CSN3P07498 182 aa14.54□□□□□ -0.08
CBWD3-204ENST00000377349 DEFA4P12838 97 aa14.54□□□□□ -0.08
CBWD3-204ENST00000377349 AREGP15514 252 aa14.54□□□□□ -0.08
CBWD3-204ENST00000377349 TAS2R20P59543 309 aa14.54□□□□□ -0.08
CBWD3-204ENST00000377349 RPL8P62917 257 aaKnown RBP14.54□□□□□ -0.08
CBWD3-204ENST00000377349 ZNF818PQ6ZRF7 136 aa14.54□□□□□ -0.08
CBWD3-204ENST00000377349 PUSL1Q8N0Z8 303 aaKnown RBP14.54□□□□□ -0.08
CBWD3-204ENST00000377349 TTC9CQ8N5M4 171 aa14.54□□□□□ -0.08
CBWD3-204ENST00000377349 NECAP1Q8NC96 275 aa14.54□□□□□ -0.08
CBWD3-204ENST00000377349 SPATA25Q9BR10 227 aa14.54□□□□□ -0.08
CBWD3-204ENST00000377349 COMMD3Q9UBI1 195 aa14.54□□□□□ -0.08
CBWD3-204ENST00000377349 FBXL7Q9UJT9 491 aa14.54□□□□□ -0.08
CBWD3-204ENST00000377349 ZNF257Q9Y2Q1 563 aa14.54□□□□□ -0.08
CBWD3-204ENST00000377349 IZUMO1RA6ND01 250 aa14.53□□□□□ -0.08
CBWD3-204ENST00000377349 BMPR1BO00238 502 aa14.53□□□□□ -0.08
CBWD3-204ENST00000377349 HLA-AP01891 365 aaKnown RBP14.53□□□□□ -0.08
CBWD3-204ENST00000377349 IL6RP08887 468 aaPredicted RBP14.53□□□□□ -0.08
CBWD3-204ENST00000377349 RFX2P48378 723 aa14.53□□□□□ -0.08
CBWD3-204ENST00000377349 OR4A47Q6IF82 309 aa14.53□□□□□ -0.08
CBWD3-204ENST00000377349 DMBX1Q8NFW5 382 aa14.53□□□□□ -0.08
CBWD3-204ENST00000377349 OR5H2Q8NGV7 314 aa14.53□□□□□ -0.08
CBWD3-204ENST00000377349 ZNF2Q9BSG1 426 aaPredicted RBP14.53□□□□□ -0.08
CBWD3-204ENST00000377349 SIGLEC8Q9NYZ4 499 aa14.53□□□□□ -0.08
CBWD3-204ENST00000377349 PEMTQ9UBM1 199 aa14.53□□□□□ -0.08
CBWD3-204ENST00000377349 E7EUB6 86 aa14.52□□□□□ -0.08
CBWD3-204ENST00000377349 H0Y980 276 aa14.52□□□□□ -0.08
CBWD3-204ENST00000377349 RLN1P04808 185 aa14.52□□□□□ -0.08
CBWD3-204ENST00000377349 HLA-GP17693 338 aa14.52□□□□□ -0.08
CBWD3-204ENST00000377349 MAS1LP35410 378 aa14.52□□□□□ -0.08
CBWD3-204ENST00000377349 MECP2P51608 486 aaKnown RBP14.52□□□□□ -0.08
CBWD3-204ENST00000377349 NCS1P62166 190 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms