RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 PGA5P0DJD9 388 aa10.18□□□□□ -0.78
VRK3-202ENST00000377011 PSG2P11465 335 aa10.18□□□□□ -0.78
VRK3-202ENST00000377011 EPHA1P21709 976 aa10.18□□□□□ -0.78
VRK3-202ENST00000377011 TAGLN2P37802 199 aaKnown RBP10.18□□□□□ -0.78
VRK3-202ENST00000377011 CDX1P47902 265 aaPredicted RBP10.18□□□□□ -0.78
VRK3-202ENST00000377011 CCL20P78556 96 aa10.18□□□□□ -0.78
VRK3-202ENST00000377011 PNRC1Q12796 327 aaPredicted RBP10.18□□□□□ -0.78
VRK3-202ENST00000377011 CR1LQ2VPA4 569 aa10.18□□□□□ -0.78
VRK3-202ENST00000377011 DNLZQ5SXM8 178 aa10.18□□□□□ -0.78
VRK3-202ENST00000377011 ZNF429Q86V71 674 aa10.18□□□□□ -0.78
VRK3-202ENST00000377011 C11orf53Q8IXP5 236 aa10.18□□□□□ -0.78
VRK3-202ENST00000377011 LINC01356Q8N9X3 169 aa10.18□□□□□ -0.78
VRK3-202ENST00000377011 PINX1Q96BK5 328 aaKnown RBP10.18□□□□□ -0.78
VRK3-202ENST00000377011 DIRC2Q96SL1 478 aa10.18□□□□□ -0.78
VRK3-202ENST00000377011 P2RX4Q99571 388 aa10.18□□□□□ -0.78
VRK3-202ENST00000377011 TOLLIPQ9H0E2 274 aa10.18□□□□□ -0.78
VRK3-202ENST00000377011 TMEM242Q9NWH2 141 aa10.18□□□□□ -0.78
VRK3-202ENST00000377011 A0A0G2JRQ6 117 aa10.17□□□□□ -0.78
VRK3-202ENST00000377011 LINC00587B1AMM8 73 aa10.17□□□□□ -0.78
VRK3-202ENST00000377011 SLC33A1O00400 549 aaPredicted RBP10.17□□□□□ -0.78
VRK3-202ENST00000377011 SH2D1BO14796 132 aa10.17□□□□□ -0.78
VRK3-202ENST00000377011 TNFSF12O43508 249 aa10.17□□□□□ -0.78
VRK3-202ENST00000377011 CLN5O75503 358 aa10.17□□□□□ -0.78
VRK3-202ENST00000377011 FCN3O75636 299 aa10.17□□□□□ -0.78
VRK3-202ENST00000377011 IGLV2-14P01704 120 aa10.17□□□□□ -0.78
VRK3-202ENST00000377011 GLIPR1P48060 266 aa10.17□□□□□ -0.78
VRK3-202ENST00000377011 CD81P60033 236 aa10.17□□□□□ -0.78
VRK3-202ENST00000377011 KIAA0141Q14154 515 aaPredicted RBP10.17□□□□□ -0.78
VRK3-202ENST00000377011 SLC25A24Q6NUK1 477 aa10.17□□□□□ -0.78
VRK3-202ENST00000377011 TMEM217Q8N7C4 229 aa10.17□□□□□ -0.78
VRK3-202ENST00000377011 TCTEX1D1Q8N7M0 179 aa10.17□□□□□ -0.78
VRK3-202ENST00000377011 RAB39BQ96DA2 213 aa10.17□□□□□ -0.78
VRK3-202ENST00000377011 ZNF488Q96MN9 340 aa10.17□□□□□ -0.78
VRK3-202ENST00000377011 ABHD14AQ9BUJ0 271 aa10.17□□□□□ -0.78
VRK3-202ENST00000377011 CACNG5Q9UF02 275 aa10.17□□□□□ -0.78
VRK3-202ENST00000377011 MIOXQ9UGB7 285 aa10.17□□□□□ -0.78
VRK3-202ENST00000377011 TIMM9Q9Y5J7 89 aa10.17□□□□□ -0.78
VRK3-202ENST00000377011 OR2H2O95918 312 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 IGKV1-39P01597 117 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 IGKV1D-39P04432 117 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 EGR1P18146 543 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 RPS10P46783 165 aaKnown RBP10.16□□□□□ -0.78
VRK3-202ENST00000377011 OR2B8PP59922 312 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 RUNX1Q01196 453 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 LYPD2Q6UXB3 125 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 C5orf24Q7Z6I8 188 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 OR51H1Q8NH63 302 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 HIF1ANQ9NWT6 349 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 PSENENQ9NZ42 101 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 OR1A1Q9P1Q5 309 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 TRAPPC2LQ9UL33 140 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 KCNS2Q9ULS6 477 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 DMRT1Q9Y5R6 373 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 GATCO43716 136 aaKnown RBP10.16□□□□□ -0.78
VRK3-202ENST00000377011 RHBDL1O75783 438 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 IGKV1-5P01602 117 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 TFF1P04155 84 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 GRPP07492 148 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 MSMBP08118 114 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 FBP1P09467 338 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 TNFRSF1AP19438 455 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 TNFSF4P23510 183 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 LCN2P80188 198 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 DLK1P80370 383 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 HAGHQ16775 308 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 LRRC75BQ2VPJ9 315 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 THNSL2Q86YJ6 484 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 FGFRL1Q8N441 504 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 SCCPDHQ8NBX0 429 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 DEFB108BQ8NET1 73 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 RAB1CQ92928 201 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 MDFIQ99750 246 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 HES4Q9HCC6 221 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 DOCK11Q5JSL3 2073 aa10.16□□□□□ -0.78
VRK3-202ENST00000377011 ELOA3CA0A087WX78 387 aaPredicted RBP10.15□□□□□ -0.78
VRK3-202ENST00000377011 TMEM30CPA0ZSE6 113 aa10.15□□□□□ -0.78
VRK3-202ENST00000377011 B4DSR2 109 aa10.15□□□□□ -0.78
VRK3-202ENST00000377011 SEC14L6B5MCN3 397 aa10.15□□□□□ -0.78
VRK3-202ENST00000377011 PTBP3O95758 552 aaKnown RBP10.15□□□□□ -0.78
VRK3-202ENST00000377011 IFNA1P01562 189 aa10.15□□□□□ -0.78
VRK3-202ENST00000377011 BCL2P10415 239 aa10.15□□□□□ -0.78
VRK3-202ENST00000377011 S100A2P29034 98 aa10.15□□□□□ -0.78
VRK3-202ENST00000377011 GATA4P43694 442 aa10.15□□□□□ -0.78
VRK3-202ENST00000377011 ELOBQ15370 118 aa10.15□□□□□ -0.78
VRK3-202ENST00000377011 ATP6V1FQ16864 119 aa10.15□□□□□ -0.78
VRK3-202ENST00000377011 ZNF585BQ52M93 769 aa10.15□□□□□ -0.78
VRK3-202ENST00000377011 DUX4L9Q6RFH8 374 aaPredicted RBP10.15□□□□□ -0.78
VRK3-202ENST00000377011 CENPVQ7Z7K6 275 aaPredicted RBP10.15□□□□□ -0.78
VRK3-202ENST00000377011 CYB561D1Q8N8Q1 229 aa10.15□□□□□ -0.78
VRK3-202ENST00000377011 FAM216AQ8WUB2 273 aa10.15□□□□□ -0.78
VRK3-202ENST00000377011 IL1F10Q8WWZ1 152 aa10.15□□□□□ -0.78
VRK3-202ENST00000377011 TMEM186Q96B77 213 aa10.15□□□□□ -0.78
VRK3-202ENST00000377011 GPHA2Q96T91 129 aa10.15□□□□□ -0.78
VRK3-202ENST00000377011 KCNIP1Q9NZI2 227 aa10.15□□□□□ -0.78
VRK3-202ENST00000377011 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.14□□□□□ -0.79
VRK3-202ENST00000377011 A0A1B0GV50 99 aa10.14□□□□□ -0.79
VRK3-202ENST00000377011 NXPH2O95156 264 aa10.14□□□□□ -0.79
VRK3-202ENST00000377011 TMEM267Q0VDI3 215 aaPredicted RBP10.14□□□□□ -0.79
VRK3-202ENST00000377011 TMEM41BQ5BJD5 291 aa10.14□□□□□ -0.79
VRK3-202ENST00000377011 SLC35E4Q6ICL7 350 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms