RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 HIPK2Q9H2X6 1198 aa13.97□□□□□ -0.17
HDAC6-202ENST00000376610 SRD5A3Q9H8P0 318 aa13.97□□□□□ -0.17
HDAC6-202ENST00000376610 RETNQ9HD89 108 aa13.97□□□□□ -0.17
HDAC6-202ENST00000376610 SMIM30A4D0T7 59 aa13.96□□□□□ -0.17
HDAC6-202ENST00000376610 TMEM235A6NFC5 223 aa13.96□□□□□ -0.17
HDAC6-202ENST00000376610 ZNF785A8K8V0 405 aa13.96□□□□□ -0.17
HDAC6-202ENST00000376610 OR11H12B2RN74 326 aa13.96□□□□□ -0.17
HDAC6-202ENST00000376610 LGALS9O00182 355 aa13.96□□□□□ -0.17
HDAC6-202ENST00000376610 HRASP01112 189 aa13.96□□□□□ -0.17
HDAC6-202ENST00000376610 CD7P09564 240 aa13.96□□□□□ -0.17
HDAC6-202ENST00000376610 KIR2DS2P43631 304 aa13.96□□□□□ -0.17
HDAC6-202ENST00000376610 DEFB125Q8N687 156 aa13.96□□□□□ -0.17
HDAC6-202ENST00000376610 TMEM167AQ8TBQ9 72 aa13.96□□□□□ -0.17
HDAC6-202ENST00000376610 FAM110AQ9BQ89 295 aa13.96□□□□□ -0.17
HDAC6-202ENST00000376610 SLC2A9Q9NRM0 540 aa13.96□□□□□ -0.17
HDAC6-202ENST00000376610 EPPK1P58107 5090 aaKnown RBP13.96□□□□□ -0.18
HDAC6-202ENST00000376610 IGKV1D-13A0A0B4J2D9 117 aa13.95□□□□□ -0.18
HDAC6-202ENST00000376610 TEX22C9J3V5 150 aa13.95□□□□□ -0.18
HDAC6-202ENST00000376610 OR2C1O95371 312 aa13.95□□□□□ -0.18
HDAC6-202ENST00000376610 HLA-AP01891 365 aaKnown RBP13.95□□□□□ -0.18
HDAC6-202ENST00000376610 IGKV1-13P0DP09 117 aa13.95□□□□□ -0.18
HDAC6-202ENST00000376610 ARL3P36405 182 aa13.95□□□□□ -0.18
HDAC6-202ENST00000376610 ARPC4P59998 168 aa13.95□□□□□ -0.18
HDAC6-202ENST00000376610 FAM106AQ4KMX7 169 aa13.95□□□□□ -0.18
HDAC6-202ENST00000376610 LINC00322Q6ZN03 302 aaPredicted RBP13.95□□□□□ -0.18
HDAC6-202ENST00000376610 ZNF66Q6ZN08 573 aa13.95□□□□□ -0.18
HDAC6-202ENST00000376610 NR2C2APQ86WQ0 139 aa13.95□□□□□ -0.18
HDAC6-202ENST00000376610 EEF1AKMT3Q96AZ1 226 aa13.95□□□□□ -0.18
HDAC6-202ENST00000376610 AIFM2Q9BRQ8 373 aa13.95□□□□□ -0.18
HDAC6-202ENST00000376610 TAS2R8Q9NYW2 309 aa13.95□□□□□ -0.18
HDAC6-202ENST00000376610 ANXA10Q9UJ72 324 aa13.95□□□□□ -0.18
HDAC6-202ENST00000376610 IGLV2-14P01704 120 aa13.94□□□□□ -0.18
HDAC6-202ENST00000376610 DEFA4P12838 97 aa13.94□□□□□ -0.18
HDAC6-202ENST00000376610 HIST1H1BP16401 226 aaKnown RBP13.94□□□□□ -0.18
HDAC6-202ENST00000376610 GABARAPL2P60520 117 aa13.94□□□□□ -0.18
HDAC6-202ENST00000376610 RPL8P62917 257 aaKnown RBP13.94□□□□□ -0.18
HDAC6-202ENST00000376610 CLEC19AQ6UXS0 136 aa13.94□□□□□ -0.18
HDAC6-202ENST00000376610 TPRA1Q86W33 373 aa13.94□□□□□ -0.18
HDAC6-202ENST00000376610 GPHB5Q86YW7 130 aa13.94□□□□□ -0.18
HDAC6-202ENST00000376610 PUSL1Q8N0Z8 303 aaKnown RBP13.94□□□□□ -0.18
HDAC6-202ENST00000376610 MFSD4AQ8N468 514 aa13.94□□□□□ -0.18
HDAC6-202ENST00000376610 WDR89Q96FK6 387 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-202ENST00000376610 ZC4H2Q9NQZ6 224 aa13.94□□□□□ -0.18
HDAC6-202ENST00000376610 DAPK2Q9UIK4 370 aa13.94□□□□□ -0.18
HDAC6-202ENST00000376610 ZNF320A2RRD8 509 aa13.93□□□□□ -0.18
HDAC6-202ENST00000376610 MRPS14O60783 128 aaKnown RBP13.93□□□□□ -0.18
HDAC6-202ENST00000376610 IGHV3-23P01764 117 aa13.93□□□□□ -0.18
HDAC6-202ENST00000376610 IL6RP08887 468 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-202ENST00000376610 ZNF735P0CB33 412 aa13.93□□□□□ -0.18
HDAC6-202ENST00000376610 PSMB9P28065 219 aa13.93□□□□□ -0.18
HDAC6-202ENST00000376610 PSMB6P28072 239 aa13.93□□□□□ -0.18
HDAC6-202ENST00000376610 FGF9P31371 208 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-202ENST00000376610 ZNF57Q68EA5 555 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-202ENST00000376610 OR4A47Q6IF82 309 aa13.93□□□□□ -0.18
HDAC6-202ENST00000376610 SSX9Q7RTT3 188 aa13.93□□□□□ -0.18
HDAC6-202ENST00000376610 TXNL4BQ9NX01 149 aaKnown RBP13.93□□□□□ -0.18
HDAC6-202ENST00000376610 RRP15Q9Y3B9 282 aaKnown RBP13.93□□□□□ -0.18
HDAC6-202ENST00000376610 RBMY1BA6NDE4 496 aaKnown RBP13.92□□□□□ -0.18
HDAC6-202ENST00000376610 RBMY1EA6NEQ0 496 aaKnown RBP13.92□□□□□ -0.18
HDAC6-202ENST00000376610 NDUFB8O95169 186 aa13.92□□□□□ -0.18
HDAC6-202ENST00000376610 CRYGCP07315 174 aa13.92□□□□□ -0.18
HDAC6-202ENST00000376610 RBMY1DP0C7P1 496 aaKnown RBP13.92□□□□□ -0.18
HDAC6-202ENST00000376610 CBLN1P23435 193 aa13.92□□□□□ -0.18
HDAC6-202ENST00000376610 ANKRD55Q3KP44 614 aa13.92□□□□□ -0.18
HDAC6-202ENST00000376610 C19orf35Q6ZS72 473 aa13.92□□□□□ -0.18
HDAC6-202ENST00000376610 LGALS14Q8TCE9 139 aa13.92□□□□□ -0.18
HDAC6-202ENST00000376610 SECTM1Q8WVN6 248 aa13.92□□□□□ -0.18
HDAC6-202ENST00000376610 CXorf58Q96LI9 332 aa13.92□□□□□ -0.18
HDAC6-202ENST00000376610 WFDC10AQ9H1F0 79 aa13.92□□□□□ -0.18
HDAC6-202ENST00000376610 HRASLSQ9HDD0 168 aa13.92□□□□□ -0.18
HDAC6-202ENST00000376610 RHBDL2Q9NX52 303 aa13.92□□□□□ -0.18
HDAC6-202ENST00000376610 RAB26Q9ULW5 256 aa13.92□□□□□ -0.18
HDAC6-202ENST00000376610 SSR3Q9UNL2 185 aa13.92□□□□□ -0.18
HDAC6-202ENST00000376610 DMRT1Q9Y5R6 373 aa13.92□□□□□ -0.18
HDAC6-202ENST00000376610 AREGP15514 252 aa13.91□□□□□ -0.18
HDAC6-202ENST00000376610 HLA-GP17693 338 aa13.91□□□□□ -0.18
HDAC6-202ENST00000376610 MSMO1Q15800 293 aa13.91□□□□□ -0.18
HDAC6-202ENST00000376610 UBE2UQ5VVX9 321 aa13.91□□□□□ -0.18
HDAC6-202ENST00000376610 SFXN4Q6P4A7 337 aa13.91□□□□□ -0.18
HDAC6-202ENST00000376610 BEST4Q8NFU0 473 aa13.91□□□□□ -0.18
HDAC6-202ENST00000376610 OR52B4Q8NGK2 314 aa13.91□□□□□ -0.18
HDAC6-202ENST00000376610 OR4A5Q8NH83 315 aa13.91□□□□□ -0.18
HDAC6-202ENST00000376610 FCGR1BQ92637 280 aa13.91□□□□□ -0.18
HDAC6-202ENST00000376610 CCDC140Q96MF4 163 aa13.91□□□□□ -0.18
HDAC6-202ENST00000376610 FANCD2OSQ96PS1 177 aa13.91□□□□□ -0.18
HDAC6-202ENST00000376610 BET1LQ9NYM9 111 aa13.91□□□□□ -0.18
HDAC6-202ENST00000376610 S4R3C0 116 aa13.91□□□□□ -0.18
HDAC6-202ENST00000376610 BIRC6Q9NR09 4857 aa13.91□□□□□ -0.18
HDAC6-202ENST00000376610 TRBV7-1A0A0A6YYK4 115 aa13.9□□□□□ -0.18
HDAC6-202ENST00000376610 A8MWP6 167 aa13.9□□□□□ -0.18
HDAC6-202ENST00000376610 E7EUB6 86 aa13.9□□□□□ -0.18
HDAC6-202ENST00000376610 TNFSF12O43508 249 aa13.9□□□□□ -0.18
HDAC6-202ENST00000376610 SSX5O60225 188 aa13.9□□□□□ -0.18
HDAC6-202ENST00000376610 CTRB1P17538 263 aa13.9□□□□□ -0.18
HDAC6-202ENST00000376610 EDN2P20800 178 aa13.9□□□□□ -0.18
HDAC6-202ENST00000376610 FCGR2CP31995 323 aa13.9□□□□□ -0.18
HDAC6-202ENST00000376610 CATR1Q13166 79 aa13.9□□□□□ -0.18
HDAC6-202ENST00000376610 EIF4EBP1Q13541 118 aaPredicted RBP13.9□□□□□ -0.18
HDAC6-202ENST00000376610 CTRB2Q6GPI1 263 aa13.9□□□□□ -0.18
HDAC6-202ENST00000376610 SPAG16Q8N0X2 631 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms