RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 OCC1Q8TAD7 63 aa11.74□□□□□ -0.53
CLCNKA-202ENST00000375692 F6UZH7 168 aa11.74□□□□□ -0.53
CLCNKA-202ENST00000375692 RRHO14718 337 aa11.74□□□□□ -0.53
CLCNKA-202ENST00000375692 CD99P14209 185 aa11.74□□□□□ -0.53
CLCNKA-202ENST00000375692 CBLN1P23435 193 aa11.74□□□□□ -0.53
CLCNKA-202ENST00000375692 PSG7Q13046 419 aa11.74□□□□□ -0.53
CLCNKA-202ENST00000375692 ZNF705AQ6ZN79 300 aaPredicted RBP11.74□□□□□ -0.53
CLCNKA-202ENST00000375692 VKORC1L1Q8N0U8 176 aa11.74□□□□□ -0.53
CLCNKA-202ENST00000375692 DIRC2Q96SL1 478 aa11.74□□□□□ -0.53
CLCNKA-202ENST00000375692 KCNIP2Q9NS61 270 aa11.74□□□□□ -0.53
CLCNKA-202ENST00000375692 TP53TG3Q9ULZ0 132 aa11.74□□□□□ -0.53
CLCNKA-202ENST00000375692 MAP1BP46821 2468 aaKnown RBP11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 OOEPA6NGQ2 149 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 FRMD6-AS1P0C7T7 363 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 KITLGP21583 273 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 OR10J1P30954 320 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 FBXW9Q5XUX1 488 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 IGF2-ASQ6U949 168 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 FDCSPQ8NFU4 85 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 FAM234AQ9H0X4 552 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 ZDHHC11Q9H8X9 412 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 OBP2BQ9NPH6 170 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 MDFIC2A0A1B0GVS7 189 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 SLC17A3O00476 420 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 AQP7O14520 342 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 MPV17P39210 176 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 TDGF1P3P51864 188 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 HLA-DRB5Q30154 266 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 MIC13Q5XKP0 118 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 Q6ZWC4 215 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 OR13A1Q8NGR1 328 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 CMTM2Q8TAZ6 248 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 SCNM1Q9BWG6 230 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 DEFB127Q9H1M4 99 aa11.73□□□□□ -0.53
CLCNKA-202ENST00000375692 KIR2DL5BA0A0G2JN68 375 aa11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 KIR2DL5BA0A0G2JPC4 375 aa11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 TMEM210A6NLX4 147 aa11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 HPRT1P00492 218 aa11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 IGHV3-13P01766 116 aa11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 IGHV3-7P01780 117 aa11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 ZNF25P17030 456 aaPredicted RBP11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 RAB4AP20338 218 aa11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 LINC00310P59036 64 aa11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 FOXF2Q12947 444 aa11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 DEFB109BQ30KR1 87 aa11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 KIR2DL5AQ8N109 375 aa11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 R3HDM4Q96D70 268 aa11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 ANKRD11Q6UB99 2663 aaPredicted RBP11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 SLC35E4Q6ICL7 350 aa11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 TREML4Q6UXN2 200 aa11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 TOMM20LQ6UXN7 152 aa11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 C11orf53Q8IXP5 236 aa11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 NANOS1Q8WY41 292 aaKnown RBP11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 ZCCHC14Q8WYQ9 949 aaKnown RBP11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 TAAR6Q96RI8 345 aa11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 YTHDF2Q9Y5A9 579 aaKnown RBP11.72□□□□□ -0.53
CLCNKA-202ENST00000375692 PIEZO1Q92508 2521 aa11.71□□□□□ -0.53
CLCNKA-202ENST00000375692 A6NNC1 897 aa11.71□□□□□ -0.53
CLCNKA-202ENST00000375692 F2Z2F3 143 aa11.71□□□□□ -0.53
CLCNKA-202ENST00000375692 KLK10O43240 276 aa11.71□□□□□ -0.53
CLCNKA-202ENST00000375692 FCGR3BO75015 233 aa11.71□□□□□ -0.53
CLCNKA-202ENST00000375692 PROP1O75360 226 aa11.71□□□□□ -0.53
CLCNKA-202ENST00000375692 TIMP3P35625 211 aa11.71□□□□□ -0.53
CLCNKA-202ENST00000375692 PRAMEF6Q5VXH4 476 aa11.71□□□□□ -0.53
CLCNKA-202ENST00000375692 ABHD12Q8N2K0 398 aa11.71□□□□□ -0.53
CLCNKA-202ENST00000375692 OR10G8Q8NGN5 311 aa11.71□□□□□ -0.53
CLCNKA-202ENST00000375692 SSMEM1Q8WWF3 244 aa11.71□□□□□ -0.53
CLCNKA-202ENST00000375692 MGST2Q99735 147 aa11.71□□□□□ -0.53
CLCNKA-202ENST00000375692 MS4A5Q9H3V2 200 aa11.71□□□□□ -0.53
CLCNKA-202ENST00000375692 HCFC1P51610 2035 aa11.71□□□□□ -0.53
CLCNKA-202ENST00000375692 TRAV3A0A0B4J244 114 aa11.71□□□□□ -0.54
CLCNKA-202ENST00000375692 TGFBR3Q03167 851 aa11.71□□□□□ -0.54
CLCNKA-202ENST00000375692 ZNF90Q03938 601 aa11.71□□□□□ -0.54
CLCNKA-202ENST00000375692 SPATA31B1PQ5VZV4 182 aa11.71□□□□□ -0.54
CLCNKA-202ENST00000375692 HES4Q9HCC6 221 aa11.71□□□□□ -0.54
CLCNKA-202ENST00000375692 TMEM106BQ9NUM4 274 aa11.71□□□□□ -0.54
CLCNKA-202ENST00000375692 FZR1Q9UM11 496 aa11.71□□□□□ -0.54
CLCNKA-202ENST00000375692 IGF2RP11717 2491 aa11.7□□□□□ -0.54
CLCNKA-202ENST00000375692 K7EN84 100 aa11.7□□□□□ -0.54
CLCNKA-202ENST00000375692 LYZL6O75951 148 aa11.7□□□□□ -0.54
CLCNKA-202ENST00000375692 CDKN1AP38936 164 aa11.7□□□□□ -0.54
CLCNKA-202ENST00000375692 MEOX1P50221 254 aa11.7□□□□□ -0.54
CLCNKA-202ENST00000375692 YPEL3P61236 119 aaPredicted RBP11.7□□□□□ -0.54
CLCNKA-202ENST00000375692 PDLIM3Q53GG5 364 aaPredicted RBP11.7□□□□□ -0.54
CLCNKA-202ENST00000375692 RAB1CQ92928 201 aa11.7□□□□□ -0.54
CLCNKA-202ENST00000375692 PIEZO2Q9H5I5 2752 aa11.7□□□□□ -0.54
CLCNKA-202ENST00000375692 HEYLQ9NQ87 328 aaPredicted RBP11.7□□□□□ -0.54
CLCNKA-202ENST00000375692 RYDENQ9NUL5 291 aaKnown RBP11.7□□□□□ -0.54
CLCNKA-202ENST00000375692 YPEL1O60688 119 aa11.7□□□□□ -0.54
CLCNKA-202ENST00000375692 SERF1AO75920 110 aa11.7□□□□□ -0.54
CLCNKA-202ENST00000375692 EDDM3AQ14507 147 aa11.7□□□□□ -0.54
CLCNKA-202ENST00000375692 Q8TCH9 128 aa11.7□□□□□ -0.54
CLCNKA-202ENST00000375692 KLF14Q8TD94 323 aaPredicted RBP11.7□□□□□ -0.54
CLCNKA-202ENST00000375692 YPEL2Q96QA6 119 aa11.7□□□□□ -0.54
CLCNKA-202ENST00000375692 HSPB9Q9BQS6 159 aa11.7□□□□□ -0.54
CLCNKA-202ENST00000375692 ABI3Q9P2A4 366 aa11.7□□□□□ -0.54
CLCNKA-202ENST00000375692 ZZEF1O43149 2961 aa11.69□□□□□ -0.54
CLCNKA-202ENST00000375692 FOXH1O75593 365 aa11.69□□□□□ -0.54
CLCNKA-202ENST00000375692 WISP2O76076 250 aa11.69□□□□□ -0.54
CLCNKA-202ENST00000375692 SP1P08047 785 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms