RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 SCP2D1Q9UJQ7 156 aa9.48□□□□□ -0.89
LSM2-208ENST00000375661 GPR132Q9UNW8 380 aa9.48□□□□□ -0.89
LSM2-208ENST00000375661 PRELID3BQ9Y3B1 194 aa9.48□□□□□ -0.89
LSM2-208ENST00000375661 AP4M1O00189 453 aa9.47□□□□□ -0.89
LSM2-208ENST00000375661 CRYGBP07316 175 aa9.47□□□□□ -0.89
LSM2-208ENST00000375661 LGALS7P47929 136 aa9.47□□□□□ -0.89
LSM2-208ENST00000375661 INPP1P49441 399 aa9.47□□□□□ -0.89
LSM2-208ENST00000375661 INSL3P51460 131 aa9.47□□□□□ -0.89
LSM2-208ENST00000375661 CATR1Q13166 79 aa9.47□□□□□ -0.89
LSM2-208ENST00000375661 SURF2Q15527 256 aaPredicted RBP9.47□□□□□ -0.89
LSM2-208ENST00000375661 C5orf64Q2M2E5 130 aa9.47□□□□□ -0.89
LSM2-208ENST00000375661 CXorf66Q5JRM2 361 aaPredicted RBP9.47□□□□□ -0.89
LSM2-208ENST00000375661 TBC1D26Q86UD7 250 aa9.47□□□□□ -0.89
LSM2-208ENST00000375661 SPAG16Q8N0X2 631 aa9.47□□□□□ -0.89
LSM2-208ENST00000375661 RNF152Q8N8N0 203 aa9.47□□□□□ -0.89
LSM2-208ENST00000375661 ZFAND1Q8TCF1 268 aa9.47□□□□□ -0.89
LSM2-208ENST00000375661 HARBI1Q96MB7 349 aa9.47□□□□□ -0.89
LSM2-208ENST00000375661 TSNAXQ99598 290 aaKnown RBP9.47□□□□□ -0.89
LSM2-208ENST00000375661 ASCL2Q99929 193 aa9.47□□□□□ -0.89
LSM2-208ENST00000375661 C5orf66Q9H5L9 145 aa9.47□□□□□ -0.89
LSM2-208ENST00000375661 LIN7CQ9NUP9 197 aaKnown RBP9.47□□□□□ -0.89
LSM2-208ENST00000375661 VSIG4Q9Y279 399 aa9.47□□□□□ -0.89
LSM2-208ENST00000375661 ZNF256Q9Y2P7 627 aaPredicted RBP9.47□□□□□ -0.89
LSM2-208ENST00000375661 SMAD5-AS1Q9Y6J3 95 aa9.47□□□□□ -0.89
LSM2-208ENST00000375661 NAP1L6A6NFF2 107 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 LINC01548A6NM66 108 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 SEC14L6B5MCN3 397 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 FCN1O00602 326 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 RRHO14718 337 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 SHOXO15266 292 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 MPPED1O15442 326 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 RBFOX2O43251 390 aaKnown RBP eCLIP9.46□□□□□ -0.9
LSM2-208ENST00000375661 SPDEFO95238 335 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 ELANEP08246 267 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 F2RP25116 425 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 BTCP35070 178 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 KIR2DS2P43631 304 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 PIGPP57054 158 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 IFITM3Q01628 133 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 FOXE3Q13461 319 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 MRGPRG-AS1Q2M3A8 158 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 ZNF585BQ52M93 769 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 OR4S2Q8NH73 311 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 OSR1Q8TAX0 266 aaPredicted RBP9.46□□□□□ -0.9
LSM2-208ENST00000375661 RASL11BQ9BPW5 248 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 HSPB9Q9BQS6 159 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 C7orf50Q9BRJ6 194 aaKnown RBP9.46□□□□□ -0.9
LSM2-208ENST00000375661 FBXL15Q9H469 300 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 TPSG1Q9NRR2 321 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 KIAA1456Q9P272 454 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 LINC00527Q9UJ94 153 aa9.46□□□□□ -0.9
LSM2-208ENST00000375661 LCE6AA0A183 80 aa9.45□□□□□ -0.9
LSM2-208ENST00000375661 SLC25A17O43808 307 aa9.45□□□□□ -0.9
LSM2-208ENST00000375661 HPRT1P00492 218 aa9.45□□□□□ -0.9
LSM2-208ENST00000375661 RPLP1P05386 114 aaKnown RBP9.45□□□□□ -0.9
LSM2-208ENST00000375661 CCR6P51684 374 aa9.45□□□□□ -0.9
LSM2-208ENST00000375661 CBX3Q13185 183 aa9.45□□□□□ -0.9
LSM2-208ENST00000375661 FHL3Q13643 280 aa9.45□□□□□ -0.9
LSM2-208ENST00000375661 LCNL1Q6ZST4 164 aa9.45□□□□□ -0.9
LSM2-208ENST00000375661 TMEM230Q96A57 120 aa9.45□□□□□ -0.9
LSM2-208ENST00000375661 RCHY1Q96PM5 261 aa9.45□□□□□ -0.9
LSM2-208ENST00000375661 METTL1Q9UBP6 276 aaKnown RBP9.45□□□□□ -0.9
LSM2-208ENST00000375661 SORL1Q92673 2214 aa9.45□□□□□ -0.9
LSM2-208ENST00000375661 STAB2Q8WWQ8 2551 aa9.45□□□□□ -0.9
LSM2-208ENST00000375661 IGHV7-81A0A0B4J1V7 117 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 UPK1BO75841 260 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 S1PR2O95136 353 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 HLA-DRB1P01911 266 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 SAA1P0DJI8 122 aaPredicted RBP9.44□□□□□ -0.9
LSM2-208ENST00000375661 LYL1P12980 280 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 S100GP29377 79 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 LPAR6P43657 344 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 UBE2KP61086 200 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 SSBP2P81877 361 aaPredicted RBP9.44□□□□□ -0.9
LSM2-208ENST00000375661 DEFB136Q30KP8 78 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 LIN54Q6MZP7 749 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 VKORC1L1Q8N0U8 176 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 TCTEX1D1Q8N7M0 179 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 TEX45Q8NA69 505 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 POC5Q8NA72 575 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 ADAD2Q8NCV1 583 aaKnown RBP9.44□□□□□ -0.9
LSM2-208ENST00000375661 CD300LFQ8TDQ1 290 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 C4orf3Q8WVX3 66 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 SCGB3A2Q96PL1 93 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 SLC25A21Q9BQT8 299 aaPredicted RBP9.44□□□□□ -0.9
LSM2-208ENST00000375661 PLEKHA2Q9HB19 425 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 FAM212BQ9NTI7 297 aaPredicted RBP9.44□□□□□ -0.9
LSM2-208ENST00000375661 COPZ2Q9P299 210 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 ZNF580Q9UK33 172 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 TBC1D24Q9ULP9 559 aa9.44□□□□□ -0.9
LSM2-208ENST00000375661 C14orf166Q9Y224 244 aaKnown RBP9.44□□□□□ -0.9
LSM2-208ENST00000375661 CENPXA8MT69 81 aa9.43□□□□□ -0.9
LSM2-208ENST00000375661 LYRM1O43325 122 aa9.43□□□□□ -0.9
LSM2-208ENST00000375661 NDUFB6O95139 128 aa9.43□□□□□ -0.9
LSM2-208ENST00000375661 IGKV1-39P01597 117 aa9.43□□□□□ -0.9
LSM2-208ENST00000375661 IGHG4P01861 327 aa9.43□□□□□ -0.9
LSM2-208ENST00000375661 IGKV1D-39P04432 117 aa9.43□□□□□ -0.9
LSM2-208ENST00000375661 TAS2R31P59538 309 aa9.43□□□□□ -0.9
LSM2-208ENST00000375661 CX3CL1P78423 397 aa9.43□□□□□ -0.9
LSM2-208ENST00000375661 NDPQ00604 133 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms