RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 HEPN1Q6WQI6 88 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 ACP7Q6ZNF0 438 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 OR13A1Q8NGR1 328 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 A0A087WWC5 75 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 A6NNC1 897 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 C9JQL5 133 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 NDUFS6O75380 124 aaKnown RBP5.53□□□□□ -1.52
SMC1A-202ENST00000375340 GCHFRP30047 84 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 GPR6P46095 362 aaPredicted RBP5.53□□□□□ -1.52
SMC1A-202ENST00000375340 ZNF600Q6ZNG1 722 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 TEX50A0A1B0GTY4 177 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 M0R296 226 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 CGAP01215 116 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 FOXC1Q12948 553 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 FAM89BQ8N5H3 189 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 PERPQ96FX8 193 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 SEBOXQ9HB31 216 aaPredicted RBP5.53□□□□□ -1.52
SMC1A-202ENST00000375340 SDF2L1Q9HCN8 221 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 CALYQ9NYX4 217 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 ODAMA1E959 279 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 OR4C46A6NHA9 309 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 B4E171 279 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 FOLR2P14207 255 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 TSPAN7P41732 249 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 MFAP2P55001 183 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 ZNRF1Q8ND25 227 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 ST6GALNAC6Q969X2 333 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 MS4A5Q9H3V2 200 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 HIGD1AQ9Y241 93 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 C12orf77C9JDV5 145 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 IGLV3-19P01714 112 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 PEAR1Q5VY43 1037 aaPredicted RBP5.53□□□□□ -1.52
SMC1A-202ENST00000375340 TGIF2LYQ8IUE0 185 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 FAM222BQ8WU58 562 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 PSMG3Q9BT73 122 aaPredicted RBP5.53□□□□□ -1.52
SMC1A-202ENST00000375340 LILRA1O75019 489 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 GZMHP20718 246 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 PPOXP50336 477 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 DNASE2BQ8WZ79 361 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 TMEM45BQ96B21 275 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 ADTRPQ96IZ2 230 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 RASL11BQ9BPW5 248 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 IL19Q9UHD0 177 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 ISLRO14498 428 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 COL8A1P27658 744 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 PRRX1P54821 245 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 PAFAH1B2P68402 229 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 NPVFQ9HCQ7 196 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 TNFRSF19Q9NS68 423 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 CTAG1AP78358 180 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 VWA1Q6PCB0 445 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 MOSP00540 346 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 CD99P14209 185 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 IGFBP2P18065 325 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 ZIC4Q8N9L1 334 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 NEU1Q99519 415 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 FOXD3Q9UJU5 478 aaPredicted RBP5.52□□□□□ -1.53
SMC1A-202ENST00000375340 GOLGB1Q14789 3259 aaKnown RBP5.52□□□□□ -1.53
SMC1A-202ENST00000375340 DLL1O00548 723 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 C1QTNF9P0C862 333 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 TWIST1Q15672 202 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 OR4A47Q6IF82 309 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 TMEM108Q6UXF1 575 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 SPTBN2O15020 2390 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 PRR19A6NJB7 356 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 OR4A8P0C604 315 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 LINC00869P0C866 280 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 GATA2P23769 480 aaPredicted RBP5.52□□□□□ -1.53
SMC1A-202ENST00000375340 PCSK4Q6UW60 755 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 MMD2Q8IY49 270 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 GOLT1BQ9Y3E0 138 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 CLDN18P56856 261 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 RPL23P62829 140 aaKnown RBP5.52□□□□□ -1.53
SMC1A-202ENST00000375340 PMCHL1Q16048 86 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 MIR17HGQ75NE6 70 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 ZNF714Q96N38 554 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 UCP1P25874 307 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 LHFPL1Q86WI0 220 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 CYYR1Q96J86 154 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 CHRNA10Q9GZZ6 450 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 FAM214BQ7L5A3 538 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 IDI2-AS1Q9NZ38 188 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 LTBP2Q14767 1821 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 DOCK7Q96N67 2140 aa5.52□□□□□ -1.53
SMC1A-202ENST00000375340 CRYABP02511 175 aaKnown RBP5.51□□□□□ -1.53
SMC1A-202ENST00000375340 LHX2P50458 406 aa5.51□□□□□ -1.53
SMC1A-202ENST00000375340 OR1L8Q8NGR8 309 aa5.51□□□□□ -1.53
SMC1A-202ENST00000375340 COL4A4P53420 1690 aaPredicted RBP5.51□□□□□ -1.53
SMC1A-202ENST00000375340 CRYGSP22914 178 aa5.51□□□□□ -1.53
SMC1A-202ENST00000375340 COL5A1-AS1Q5SY13 56 aa5.51□□□□□ -1.53
SMC1A-202ENST00000375340 C1orf185Q5T7R7 199 aa5.51□□□□□ -1.53
SMC1A-202ENST00000375340 ZNF497Q6ZNH5 498 aa5.51□□□□□ -1.53
SMC1A-202ENST00000375340 HIST3H2BBQ8N257 126 aa5.51□□□□□ -1.53
SMC1A-202ENST00000375340 KCNS1Q96KK3 526 aa5.51□□□□□ -1.53
SMC1A-202ENST00000375340 ORM1P02763 201 aa5.51□□□□□ -1.53
SMC1A-202ENST00000375340 ERVFRD-1P60508 538 aa5.51□□□□□ -1.53
SMC1A-202ENST00000375340 LINC00469Q8N7U9 141 aa5.51□□□□□ -1.53
SMC1A-202ENST00000375340 GTF3AQ92664 365 aaKnown RBP5.51□□□□□ -1.53
SMC1A-202ENST00000375340 WDYHV1Q96HA8 205 aa5.51□□□□□ -1.53
SMC1A-202ENST00000375340 TCF19Q9Y242 345 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 686.5 ms