RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 MRPL13Q9BYD1 178 aaKnown RBP8.72□□□□□ -1.01
CD28-202ENST00000374481 OSTCQ9NRP0 149 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 SPINK2P20155 84 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 COL9A1P20849 921 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 YPEL3P61236 119 aaPredicted RBP8.72□□□□□ -1.01
CD28-202ENST00000374481 ZP4Q12836 540 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 GAGE2BQ13066 116 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 HES1Q14469 280 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 GAGE2EQ4V326 116 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 NEUROG1Q92886 237 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 GAGE2DQ9UEU5 116 aa8.72□□□□□ -1.01
CD28-202ENST00000374481 AMMECR1Q9Y4X0 333 aaPredicted RBP8.72□□□□□ -1.01
CD28-202ENST00000374481 A0A1W2PRE2 83 aa8.71□□□□□ -1.01
CD28-202ENST00000374481 GDF1P27539 372 aa8.71□□□□□ -1.01
CD28-202ENST00000374481 IL15RAQ13261 267 aa8.71□□□□□ -1.01
CD28-202ENST00000374481 OR5P3Q8WZ94 311 aa8.71□□□□□ -1.01
CD28-202ENST00000374481 TRAV26-1A0A087WT03 109 aa8.71□□□□□ -1.02
CD28-202ENST00000374481 CGAP01215 116 aa8.71□□□□□ -1.02
CD28-202ENST00000374481 TBR1Q16650 682 aa8.71□□□□□ -1.02
CD28-202ENST00000374481 DEFB133Q30KQ1 61 aa8.71□□□□□ -1.02
CD28-202ENST00000374481 TMEM177Q53S58 311 aa8.71□□□□□ -1.02
CD28-202ENST00000374481 CDCP2Q5VXM1 449 aa8.71□□□□□ -1.02
CD28-202ENST00000374481 MRPL16Q9NX20 251 aaKnown RBP8.71□□□□□ -1.02
CD28-202ENST00000374481 NUPR1O60356 82 aa8.71□□□□□ -1.02
CD28-202ENST00000374481 TOMM40O96008 361 aa8.71□□□□□ -1.02
CD28-202ENST00000374481 APOHP02749 345 aaPredicted RBP8.71□□□□□ -1.02
CD28-202ENST00000374481 ORM2P19652 201 aa8.71□□□□□ -1.02
CD28-202ENST00000374481 CFPP27918 469 aa8.71□□□□□ -1.02
CD28-202ENST00000374481 BVES-AS1Q5T3Y7 98 aa8.71□□□□□ -1.02
CD28-202ENST00000374481 CTHRC1Q96CG8 243 aa8.71□□□□□ -1.02
CD28-202ENST00000374481 SLC25A33Q9BSK2 321 aa8.71□□□□□ -1.02
CD28-202ENST00000374481 MRPL27Q9P0M9 148 aaKnown RBP8.71□□□□□ -1.02
CD28-202ENST00000374481 C3orf80F5H4A9 247 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 NRG2O14511 850 aaPredicted RBP8.7□□□□□ -1.02
CD28-202ENST00000374481 RRHO14718 337 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 MT-CO3P00414 261 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 DCAF12Q5T6F0 453 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 C16orf47Q6ZP98 133 aaPredicted RBP8.7□□□□□ -1.02
CD28-202ENST00000374481 Q8IYB0 196 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 ZADH2Q8N4Q0 377 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 TPRX1Q8N7U7 411 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 OR2Z1Q8NG97 314 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 OR9G4Q8NGQ1 327 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 AICDAQ9GZX7 198 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 FAM60AQ9NP50 221 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 FGF21Q9NSA1 209 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 PDCD11Q14690 1871 aaKnown RBP8.7□□□□□ -1.02
CD28-202ENST00000374481 TRAV8-6A0A0B4J262 113 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 C9orf118A6NHY6 69 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 K7EP34 96 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 DEFA4P12838 97 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 OPRK1P41145 380 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 SLAQ13239 276 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 CLUHP3Q96NS8 147 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 PAXXQ9BUH6 204 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 SS18L2Q9UHA2 77 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 ZNF256Q9Y2P7 627 aaPredicted RBP8.7□□□□□ -1.02
CD28-202ENST00000374481 TMEM262E9PQX1 116 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 SYS1-DBNDD2H3BUS1 97 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 SMIM17P0DL12 118 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 CRYBA4P53673 196 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 SLC23A3Q6PIS1 610 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 FAM131CQ96AQ9 280 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 SPACA9Q96E40 222 aaPredicted RBP8.7□□□□□ -1.02
CD28-202ENST00000374481 NYNRINQ9P2P1 1898 aaKnown RBP8.7□□□□□ -1.02
CD28-202ENST00000374481 WDR81Q562E7 1941 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 LRRC30A6NM36 301 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 RAMP3O60896 148 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 CEACAM3P40198 252 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 MZT1Q08AG7 82 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 MYOZ3Q8TDC0 251 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 RPEQ96AT9 228 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 PILRBQ9UKJ0 227 aa8.7□□□□□ -1.02
CD28-202ENST00000374481 SIP14410 1827 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 RP1L1Q8IWN7 2480 aaPredicted RBP8.69□□□□□ -1.02
CD28-202ENST00000374481 A0A1B0GX78 115 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 HIGD1CA8MV81 97 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 VSTM5A8MXK1 200 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 MS4A18H0YCH9 400 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 OR1D5P58170 312 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 MS4A18Q3C1V0 323 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 ETDBQ3ZM63 59 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 LINC00696Q6ZRV3 163 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 DEFB125Q8N687 156 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 OR52E5Q8NH55 327 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 SGK494Q96LW2 274 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 PILRAQ9UKJ1 303 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 H3BRM9 83 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 CXCL13O43927 109 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 TIMM8AO60220 97 aaPredicted RBP8.69□□□□□ -1.02
CD28-202ENST00000374481 GUSBP1Q15486 140 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 STPG3Q8N7X2 389 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 IGKV1-9A0A0C4DH69 117 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 ZIC3O60481 467 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 FGF12P61328 243 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 OR13H1Q8NG92 308 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 WNT16Q9UBV4 365 aa8.69□□□□□ -1.02
CD28-202ENST00000374481 DOCK6Q96HP0 2047 aa8.68□□□□□ -1.02
CD28-202ENST00000374481 TRAV8-2A0A0B4J237 113 aa8.68□□□□□ -1.02
CD28-202ENST00000374481 ENSAO43768 121 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms