RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 ZDHHC8Q9ULC8 765 aa11.32□□□□□ -0.6
CLIC4-201ENST00000374379 FOXI3A8MTJ6 420 aaPredicted RBP11.31□□□□□ -0.6
CLIC4-201ENST00000374379 IGHG3P01860 377 aa11.31□□□□□ -0.6
CLIC4-201ENST00000374379 OR10J1P30954 320 aa11.31□□□□□ -0.6
CLIC4-201ENST00000374379 GCSAMLQ5JQS6 135 aa11.31□□□□□ -0.6
CLIC4-201ENST00000374379 Q6ZR03 302 aa11.31□□□□□ -0.6
CLIC4-201ENST00000374379 SLC25A15Q9Y619 301 aa11.31□□□□□ -0.6
CLIC4-201ENST00000374379 GATA2P23769 480 aaPredicted RBP11.31□□□□□ -0.6
CLIC4-201ENST00000374379 PRR30Q53SZ7 412 aaPredicted RBP11.31□□□□□ -0.6
CLIC4-201ENST00000374379 TOLLIPQ9H0E2 274 aa11.31□□□□□ -0.6
CLIC4-201ENST00000374379 SIRT7Q9NRC8 400 aa11.31□□□□□ -0.6
CLIC4-201ENST00000374379 AUP1Q9Y679 476 aa11.31□□□□□ -0.6
CLIC4-201ENST00000374379 FAM3BP58499 235 aaPredicted RBP11.31□□□□□ -0.6
CLIC4-201ENST00000374379 GNB2P62879 340 aa11.31□□□□□ -0.6
CLIC4-201ENST00000374379 SLC35B1P78383 322 aa11.31□□□□□ -0.6
CLIC4-201ENST00000374379 BATFQ16520 125 aa11.31□□□□□ -0.6
CLIC4-201ENST00000374379 SPRY4Q9C004 299 aa11.31□□□□□ -0.6
CLIC4-201ENST00000374379 NPVFQ9HCQ7 196 aa11.31□□□□□ -0.6
CLIC4-201ENST00000374379 ZNRD1Q9P1U0 126 aa11.31□□□□□ -0.6
CLIC4-201ENST00000374379 PRNDQ9UKY0 176 aa11.31□□□□□ -0.6
CLIC4-201ENST00000374379 LINC00473A8K010 186 aa11.31□□□□□ -0.6
CLIC4-201ENST00000374379 AP4M1O00189 453 aa11.31□□□□□ -0.6
CLIC4-201ENST00000374379 UBE2L3P68036 154 aaKnown RBP11.31□□□□□ -0.6
CLIC4-201ENST00000374379 MORN2Q502X0 79 aa11.31□□□□□ -0.6
CLIC4-201ENST00000374379 FAM122AQ96E09 287 aa11.31□□□□□ -0.6
CLIC4-201ENST00000374379 MYO15AQ9UKN7 3530 aa11.3□□□□□ -0.6
CLIC4-201ENST00000374379 CT45A6P0DMU7 189 aa11.3□□□□□ -0.6
CLIC4-201ENST00000374379 CT45A5P0DMU8 189 aa11.3□□□□□ -0.6
CLIC4-201ENST00000374379 CT45A7P0DMV0 189 aa11.3□□□□□ -0.6
CLIC4-201ENST00000374379 MST1LQ2TV78 715 aa11.3□□□□□ -0.6
CLIC4-201ENST00000374379 CT45A1Q5HYN5 189 aa11.3□□□□□ -0.6
CLIC4-201ENST00000374379 FAM90A1Q86YD7 464 aa11.3□□□□□ -0.6
CLIC4-201ENST00000374379 OR1B1Q8NGR6 318 aa11.3□□□□□ -0.6
CLIC4-201ENST00000374379 CT45A3Q8NHU0 189 aa11.3□□□□□ -0.6
CLIC4-201ENST00000374379 SNRNP40Q96DI7 357 aaKnown RBP11.3□□□□□ -0.6
CLIC4-201ENST00000374379 SUMO1P63165 101 aaKnown RBP11.3□□□□□ -0.6
CLIC4-201ENST00000374379 DHRS7BQ6IAN0 325 aaPredicted RBP11.3□□□□□ -0.6
CLIC4-201ENST00000374379 SPNS3Q6ZMD2 512 aa11.3□□□□□ -0.6
CLIC4-201ENST00000374379 C16orf82Q7Z2V1 217 aa11.3□□□□□ -0.6
CLIC4-201ENST00000374379 SPACA3Q8IXA5 215 aa11.3□□□□□ -0.6
CLIC4-201ENST00000374379 C1orf174Q8IYL3 243 aa11.3□□□□□ -0.6
CLIC4-201ENST00000374379 GNB4Q9HAV0 340 aa11.3□□□□□ -0.6
CLIC4-201ENST00000374379 TUBG2Q9NRH3 451 aa11.3□□□□□ -0.6
CLIC4-201ENST00000374379 FAM90A26D6RGX4 464 aa11.3□□□□□ -0.6
CLIC4-201ENST00000374379 PHOX2AO14813 284 aa11.3□□□□□ -0.6
CLIC4-201ENST00000374379 IGKV3-15P01624 115 aa11.3□□□□□ -0.6
CLIC4-201ENST00000374379 OR9G9P0C7N8 305 aa11.3□□□□□ -0.6
CLIC4-201ENST00000374379 HSPE1P61604 102 aaKnown RBP11.3□□□□□ -0.6
CLIC4-201ENST00000374379 LRRC75BQ2VPJ9 315 aa11.3□□□□□ -0.6
CLIC4-201ENST00000374379 COL6A3P12111 3177 aa11.29□□□□□ -0.6
CLIC4-201ENST00000374379 IGHV1-46P01743 117 aa11.29□□□□□ -0.6
CLIC4-201ENST00000374379 SRP19P09132 144 aaKnown RBP11.29□□□□□ -0.6
CLIC4-201ENST00000374379 MYOD1P15172 320 aa11.29□□□□□ -0.6
CLIC4-201ENST00000374379 MEOX2P50222 304 aa11.29□□□□□ -0.6
CLIC4-201ENST00000374379 ARL16Q0P5N6 197 aa11.29□□□□□ -0.6
CLIC4-201ENST00000374379 ZNF98A6NK75 572 aa11.29□□□□□ -0.6
CLIC4-201ENST00000374379 SRRM5B3KS81 715 aa11.29□□□□□ -0.6
CLIC4-201ENST00000374379 DUX4L9Q6RFH8 374 aaPredicted RBP11.29□□□□□ -0.6
CLIC4-201ENST00000374379 OR1L8Q8NGR8 309 aa11.29□□□□□ -0.6
CLIC4-201ENST00000374379 GATAD1Q8WUU5 269 aa11.29□□□□□ -0.6
CLIC4-201ENST00000374379 SGK494Q96LW2 274 aa11.29□□□□□ -0.6
CLIC4-201ENST00000374379 CSPG4Q6UVK1 2322 aa11.29□□□□□ -0.6
CLIC4-201ENST00000374379 NOTCH2Q04721 2471 aa11.29□□□□□ -0.6
CLIC4-201ENST00000374379 SAA2-SAA4A0A096LPE2 208 aa11.29□□□□□ -0.6
CLIC4-201ENST00000374379 SLC31A2O15432 143 aa11.29□□□□□ -0.6
CLIC4-201ENST00000374379 SAA2P0DJI9 122 aaPredicted RBP11.29□□□□□ -0.6
CLIC4-201ENST00000374379 ARL14EPLP0DKL9 152 aa11.29□□□□□ -0.6
CLIC4-201ENST00000374379 ARF6P62330 175 aa11.29□□□□□ -0.6
CLIC4-201ENST00000374379 PNRC1Q12796 327 aaPredicted RBP11.29□□□□□ -0.6
CLIC4-201ENST00000374379 FAM103A1Q9BTL3 118 aaKnown RBP11.29□□□□□ -0.6
CLIC4-201ENST00000374379 NPCDR1Q9BY65 106 aa11.29□□□□□ -0.6
CLIC4-201ENST00000374379 BARX1Q9HBU1 254 aaPredicted RBP11.29□□□□□ -0.6
CLIC4-201ENST00000374379 FUT9Q9Y231 359 aa11.29□□□□□ -0.6
CLIC4-201ENST00000374379 TRAV3A0A0B4J244 114 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 KBTBD11-OT1A0A1B0GTJ5 212 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 H3BTX0 84 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 CA2P00918 260 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 S100A8P05109 93 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 NTF3P20783 257 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 ZNF585BQ52M93 769 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 OR4A47Q6IF82 309 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 FKBP11Q9NYL4 201 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 RAXQ9Y2V3 346 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 IGKV1D-17A0A075B6S4 117 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 OR51G1Q8NGK1 321 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 OR2T10Q8NGZ9 312 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 OR4X1Q8NH49 305 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 UBTD1Q9HAC8 227 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 MANBALQ9NQG1 85 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 IL19Q9UHD0 177 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 TRAPPC1Q9Y5R8 145 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 PRRX1P54821 245 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 BPIFB3P59826 476 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 LYZP61626 148 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 DOLPP1Q86YN1 238 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 PARLQ9H300 379 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 SLC45A2Q9UMX9 530 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 C17orf100A8MU93 164 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 TNFSF13O75888 250 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 DUTP33316 252 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms