RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 NPFFR1Q9GZQ6 430 aa12.23□□□□□ -0.45
TRAF1-201ENST00000373887 TMEM222Q9H0R3 208 aa12.23□□□□□ -0.45
TRAF1-201ENST00000373887 MOSP00540 346 aa12.23□□□□□ -0.45
TRAF1-201ENST00000373887 ZP4Q12836 540 aa12.23□□□□□ -0.45
TRAF1-201ENST00000373887 FAM159AQ6UWV7 190 aa12.23□□□□□ -0.45
TRAF1-201ENST00000373887 KLF14Q8TD94 323 aaPredicted RBP12.23□□□□□ -0.45
TRAF1-201ENST00000373887 RRHO14718 337 aa12.22□□□□□ -0.45
TRAF1-201ENST00000373887 NGFRP08138 427 aa12.22□□□□□ -0.45
TRAF1-201ENST00000373887 PDLIM4P50479 330 aa12.22□□□□□ -0.45
TRAF1-201ENST00000373887 LCN2P80188 198 aa12.22□□□□□ -0.45
TRAF1-201ENST00000373887 MARS2Q96GW9 593 aaKnown RBP12.22□□□□□ -0.45
TRAF1-201ENST00000373887 ALKBH7Q9BT30 221 aaPredicted RBP12.22□□□□□ -0.45
TRAF1-201ENST00000373887 WNT10AQ9GZT5 417 aa12.22□□□□□ -0.45
TRAF1-201ENST00000373887 PPIAL4CA0A0B4J2A2 164 aa12.22□□□□□ -0.45
TRAF1-201ENST00000373887 PPIAL4GP0DN37 164 aa12.22□□□□□ -0.45
TRAF1-201ENST00000373887 Q5PR19 223 aa12.22□□□□□ -0.45
TRAF1-201ENST00000373887 FGFRL1Q8N441 504 aa12.22□□□□□ -0.45
TRAF1-201ENST00000373887 SFXN3Q9BWM7 321 aa12.22□□□□□ -0.45
TRAF1-201ENST00000373887 TRGC1P0CF51 173 aa12.22□□□□□ -0.45
TRAF1-201ENST00000373887 CTAG1AP78358 180 aa12.22□□□□□ -0.45
TRAF1-201ENST00000373887 MMD2Q8IY49 270 aa12.22□□□□□ -0.45
TRAF1-201ENST00000373887 TYMSP04818 313 aa12.22□□□□□ -0.45
TRAF1-201ENST00000373887 ISG15P05161 165 aa12.22□□□□□ -0.45
TRAF1-201ENST00000373887 KCNE5Q9UJ90 142 aa12.22□□□□□ -0.45
TRAF1-201ENST00000373887 WISP3O95389 354 aaPredicted RBP12.22□□□□□ -0.45
TRAF1-201ENST00000373887 HTN3P15516 51 aa12.22□□□□□ -0.45
TRAF1-201ENST00000373887 SELENOTP62341 195 aa12.22□□□□□ -0.45
TRAF1-201ENST00000373887 MEF2CQ06413 473 aaPredicted RBP12.22□□□□□ -0.45
TRAF1-201ENST00000373887 EGR1P18146 543 aa12.21□□□□□ -0.45
TRAF1-201ENST00000373887 ZNF600Q6ZNG1 722 aa12.21□□□□□ -0.45
TRAF1-201ENST00000373887 SHISA5Q8N114 240 aa12.21□□□□□ -0.45
TRAF1-201ENST00000373887 ABHD12Q8N2K0 398 aa12.21□□□□□ -0.45
TRAF1-201ENST00000373887 KCNS1Q96KK3 526 aa12.21□□□□□ -0.45
TRAF1-201ENST00000373887 JKAMPQ9P055 326 aa12.21□□□□□ -0.45
TRAF1-201ENST00000373887 TRAV12-3A0A0B4J271 114 aa12.21□□□□□ -0.45
TRAF1-201ENST00000373887 IGHV1-69-2A0A0G2JMI3 117 aa12.21□□□□□ -0.45
TRAF1-201ENST00000373887 CEACAM4O75871 244 aa12.21□□□□□ -0.45
TRAF1-201ENST00000373887 LOC105371242A0A075B767 164 aa12.21□□□□□ -0.45
TRAF1-201ENST00000373887 M0R381 172 aa12.21□□□□□ -0.45
TRAF1-201ENST00000373887 ELF5Q9UKW6 265 aaPredicted RBP12.21□□□□□ -0.45
TRAF1-201ENST00000373887 C8orf88P0DMB2 117 aa12.21□□□□□ -0.46
TRAF1-201ENST00000373887 RAB9AP51151 201 aa12.21□□□□□ -0.46
TRAF1-201ENST00000373887 CEP290O15078 2479 aa12.21□□□□□ -0.46
TRAF1-201ENST00000373887 TSPOP30536 169 aa12.21□□□□□ -0.46
TRAF1-201ENST00000373887 FOXA3P55318 350 aaPredicted RBP12.21□□□□□ -0.46
TRAF1-201ENST00000373887 C11orf68Q9H3H3 251 aaKnown RBP12.21□□□□□ -0.46
TRAF1-201ENST00000373887 TUBA4BQ9H853 241 aa12.21□□□□□ -0.46
TRAF1-201ENST00000373887 A0A1B0GWB2 263 aa12.2□□□□□ -0.46
TRAF1-201ENST00000373887 GZMMP51124 257 aa12.2□□□□□ -0.46
TRAF1-201ENST00000373887 BRCA1P38398 1863 aaKnown RBP12.2□□□□□ -0.46
TRAF1-201ENST00000373887 SNRPD3P62318 126 aaKnown RBP12.2□□□□□ -0.46
TRAF1-201ENST00000373887 PCSK4Q6UW60 755 aa12.2□□□□□ -0.46
TRAF1-201ENST00000373887 RNASEH2CQ8TDP1 164 aaKnown RBP12.2□□□□□ -0.46
TRAF1-201ENST00000373887 P2RY4P51582 365 aa12.2□□□□□ -0.46
TRAF1-201ENST00000373887 C14orf144Q96I85 54 aa12.2□□□□□ -0.46
TRAF1-201ENST00000373887 DNAJC13O75165 2243 aa12.2□□□□□ -0.46
TRAF1-201ENST00000373887 STAG3L3P0CL85 134 aa12.2□□□□□ -0.46
TRAF1-201ENST00000373887 PRB3Q04118 309 aaPredicted RBP12.2□□□□□ -0.46
TRAF1-201ENST00000373887 OR5AN1Q8NGI8 311 aa12.2□□□□□ -0.46
TRAF1-201ENST00000373887 EEF1AKMT3Q96AZ1 226 aa12.2□□□□□ -0.46
TRAF1-201ENST00000373887 ZNF414Q96IQ9 312 aa12.2□□□□□ -0.46
TRAF1-201ENST00000373887 TNFRSF18Q9Y5U5 241 aa12.2□□□□□ -0.46
TRAF1-201ENST00000373887 TRBV7-9A0A0J9YWB2 115 aa12.2□□□□□ -0.46
TRAF1-201ENST00000373887 NDUFA3O95167 84 aa12.2□□□□□ -0.46
TRAF1-201ENST00000373887 NPPCP23582 126 aa12.2□□□□□ -0.46
TRAF1-201ENST00000373887 RND3P61587 244 aa12.2□□□□□ -0.46
TRAF1-201ENST00000373887 TET1Q8NFU7 2136 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 OR11H12B2RN74 326 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 CBLN1P23435 193 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 RPS11P62280 158 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRAF1-201ENST00000373887 IRF3Q14653 427 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 SLC25A47Q6Q0C1 308 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 OR11H1Q8NG94 326 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 OR11H2Q8NH07 326 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 SPSB4Q96A44 273 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 APOMO95445 188 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 ITLN2Q8WWU7 325 aaPredicted RBP12.19□□□□□ -0.46
TRAF1-201ENST00000373887 KCNK17Q96T54 332 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 CDKN1AP38936 164 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 TNFSF10P50591 281 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 ZNF660Q6AZW8 331 aaPredicted RBP12.19□□□□□ -0.46
TRAF1-201ENST00000373887 OR51G1Q8NGK1 321 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 PRELID3AQ96N28 172 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 DPH3P1Q9H4G8 78 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 SMDT1Q9H4I9 107 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 SAA1P0DJI8 122 aaPredicted RBP12.19□□□□□ -0.46
TRAF1-201ENST00000373887 PMCHL2Q9BQD1 86 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 NINQ8N4C6 2090 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 VAX1Q5SQQ9 334 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 FAM201AQ5SY85 155 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 LINC00305Q7Z4B0 112 aa12.19□□□□□ -0.46
TRAF1-201ENST00000373887 SCN10AQ9Y5Y9 1956 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 TRAV30A0A087WSZ9 112 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 TNFRSF9Q07011 255 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 OR5A1Q8NGJ0 315 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 RAMP1O60894 148 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 CA1P00915 261 aaPredicted RBP12.18□□□□□ -0.46
TRAF1-201ENST00000373887 IGHV4-39P01824 125 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 CENPWQ5EE01 88 aa12.18□□□□□ -0.46
TRAF1-201ENST00000373887 PNKDQ8N490 385 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms