RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 FAM120AOSQ5T036 256 aa8□□□□□ -1.13
SF3A3-201ENST00000373019 CARD17Q5XLA6 110 aa8□□□□□ -1.13
SF3A3-201ENST00000373019 PCSK4Q6UW60 755 aa8□□□□□ -1.13
SF3A3-201ENST00000373019 SFTPA2Q8IWL1 248 aa8□□□□□ -1.13
SF3A3-201ENST00000373019 LMX1AQ8TE12 382 aa8□□□□□ -1.13
SF3A3-201ENST00000373019 PATE1Q8WXA2 126 aa8□□□□□ -1.13
SF3A3-201ENST00000373019 HS3ST3A1Q9Y663 406 aa8□□□□□ -1.13
SF3A3-201ENST00000373019 DIDO1Q9BTC0 2240 aaKnown RBP7.99□□□□□ -1.13
SF3A3-201ENST00000373019 PCDH15Q96QU1 1955 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 TRAPPC2LH3BP13 241 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 K7EP34 96 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 M0R2Z0 102 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 RRHO14718 337 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 HLA-DRB1P01911 266 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 SMIM17P0DL12 118 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 COL8A2P25067 703 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 TMEM105Q8N8V8 129 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 OR1E3Q8WZA6 343 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 SPAARA0A1B0GVQ0 90 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 IGKV3-11P04433 115 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 PPOXP50336 477 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 RBM11P57052 281 aaKnown RBP7.99□□□□□ -1.13
SF3A3-201ENST00000373019 RPL31P62899 125 aaKnown RBP7.99□□□□□ -1.13
SF3A3-201ENST00000373019 GABRA6Q16445 453 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 GAB4Q2WGN9 574 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 ZNF585BQ52M93 769 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 KIAA0895LQ68EN5 471 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 FOXL2NBQ6ZUU3 175 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 GTF2H5Q6ZYL4 71 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 OR2AE1Q8NHA4 323 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 RAB1CQ92928 201 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 CLDN23Q96B33 292 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 EAF1Q96JC9 268 aaPredicted RBP7.99□□□□□ -1.13
SF3A3-201ENST00000373019 ULBP2Q9BZM5 246 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 FSCN3Q9NQT6 498 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 YTHDF2Q9Y5A9 579 aaKnown RBP7.99□□□□□ -1.13
SF3A3-201ENST00000373019 ATP23Q9Y6H3 246 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 ZNF407Q9C0G0 2248 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 MED12LQ86YW9 2145 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 OTOGLQ3ZCN5 2332 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 C2orf72A6NCS6 295 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 EFNA2O43921 213 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 C2orf91Q6ZV80 131 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 SPACA3Q8IXA5 215 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 URB1-AS1Q96HZ7 61 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 TMEM147Q9BVK8 224 aa7.99□□□□□ -1.13
SF3A3-201ENST00000373019 A0A0J9YY10 115 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 SHISA8B8ZZ34 492 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 SLC31A1O15431 190 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 OR7C1O76099 320 aaPredicted RBP7.98□□□□□ -1.13
SF3A3-201ENST00000373019 GUCA1AP43080 201 aaPredicted RBP7.98□□□□□ -1.13
SF3A3-201ENST00000373019 CKS1BP61024 79 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 HIST1H1AQ02539 215 aaPredicted RBP7.98□□□□□ -1.13
SF3A3-201ENST00000373019 TMEM70Q9BUB7 260 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 OR2D2Q9H210 308 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 PNO1Q9NRX1 252 aaKnown RBP7.98□□□□□ -1.13
SF3A3-201ENST00000373019 TNFRSF19Q9NS68 423 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 ARL2-SNX15V9GYD0 113 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 CNTRLQ7Z7A1 2325 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 NBASA2RRP1 2371 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 ACACBO00763 2458 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 LRP5LA4QPB2 252 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 C9orf118A6NHY6 69 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 H3BML4 177 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 HSBP1O75506 76 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 CD1BP29016 333 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 RPS16P62249 146 aaKnown RBP7.98□□□□□ -1.13
SF3A3-201ENST00000373019 CST6Q15828 149 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 VWC2Q2TAL6 325 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 ZNF718Q3SXZ3 478 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 CCDC144NLQ6NUI1 221 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 MRPL54Q6P161 138 aaKnown RBP7.98□□□□□ -1.13
SF3A3-201ENST00000373019 PET117Q6UWS5 81 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 TMEM92Q6UXU6 159 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 MBD6Q96DN6 1003 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 WDR54Q9H977 334 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 HRASLS2Q9NWW9 162 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 ZNF391Q9UJN7 358 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 CACNA1BQ00975 2339 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 A0A1W2PP55 124 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 CLDN1O95832 211 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 HLA-DQA1P01909 254 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 AMY1AP04745 511 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 ARL14EPLP0DKL9 152 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 KIR2DL1P43626 348 aaPredicted RBP7.98□□□□□ -1.13
SF3A3-201ENST00000373019 TCL1AP56279 114 aa7.98□□□□□ -1.13
SF3A3-201ENST00000373019 MEF2CQ06413 473 aaPredicted RBP7.98□□□□□ -1.13
SF3A3-201ENST00000373019 NAA38Q9BRA0 125 aaKnown RBP7.98□□□□□ -1.13
SF3A3-201ENST00000373019 RNASE7Q9H1E1 156 aaKnown RBP7.98□□□□□ -1.13
SF3A3-201ENST00000373019 TEX48A0A1B0GUV7 120 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 C9JCJ5 164 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 F2RL2O00254 374 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 APCSP02743 223 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 REG1BP48304 166 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 SRSF7Q16629 238 aaKnown RBP eCLIP7.97□□□□□ -1.131e-11■□□□□ 8.3
SF3A3-201ENST00000373019 LINC00173Q6ZV60 143 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 OR2Z1Q8NG97 314 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 OR10J4P0C629 311 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 STAG3L3P0CL85 134 aa7.97□□□□□ -1.13
SF3A3-201ENST00000373019 GPR183P32249 361 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms