RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 MPC1Q9Y5U8 109 aa10.76□□□□□ -0.69
CHCHD1-202ENST00000372837 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.75□□□□□ -0.691e-6■■■□□ 17.5
CHCHD1-202ENST00000372837 MGAM2Q2M2H8 2515 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 A0A0G2JMM0 328 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 A0A1W2PPB8 328 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 A0A1W2PRS3 328 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 KIR3DP1A8MWS1 328 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 HS3ST1O14792 307 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 NEURL1O76050 574 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 KRASP01116 189 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 SP1P08047 785 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 RFPL3SP0C7P2 107 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 OR3A1P47881 315 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 ASCL1P50553 236 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 ARF1P84077 181 aaKnown RBP10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 SLC38A11Q08AI6 406 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 CYB5R2Q6BCY4 276 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 PRSS57Q6UWY2 283 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 RPP25LQ8N5L8 163 aaKnown RBP10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 ZNF709Q8N972 641 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 MS4A10Q96PG2 267 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 PCGF1Q9BSM1 259 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 ZNF703Q9H7S9 590 aaPredicted RBP10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 GP6Q9HCN6 339 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 TMEM106BQ9NUM4 274 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 TRAPPC1Q9Y5R8 145 aa10.75□□□□□ -0.69
CHCHD1-202ENST00000372837 NOTCH1P46531 2555 aa10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 IGKV1D-13A0A0B4J2D9 117 aa10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 A0A0G2JNJ9 132 aa10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 A0A1W2PPR1 153 aa10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 YPEL1O60688 119 aa10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 SS18L1O75177 396 aaPredicted RBP10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 NXPH2O95156 264 aa10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 MT-ND6P03923 174 aa10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 SCTP09683 121 aa10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 IGKV1-13P0DP09 117 aa10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 GZMHP20718 246 aa10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 RPP30P78346 268 aaKnown RBP10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 OR56B2PQ8NGI1 322 aa10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 APH1AQ96BI3 265 aa10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 YPEL2Q96QA6 119 aa10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 RSG1Q9BU20 258 aa10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 PRRG4Q9BZD6 226 aa10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 DEPPQ9NTK1 212 aa10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 CACNG5Q9UF02 275 aa10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 Q9UFV3 132 aa10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 FUT9Q9Y231 359 aa10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 KLF13Q9Y2Y9 288 aaPredicted RBP10.74□□□□□ -0.69
CHCHD1-202ENST00000372837 SAA2-SAA4A0A096LPE2 208 aa10.73□□□□□ -0.69
CHCHD1-202ENST00000372837 C20orf202A1L168 122 aa10.73□□□□□ -0.69
CHCHD1-202ENST00000372837 ANKRD30BLA7E2S9 258 aa10.73□□□□□ -0.69
CHCHD1-202ENST00000372837 SMPD2O60906 423 aa10.73□□□□□ -0.69
CHCHD1-202ENST00000372837 HPRT1P00492 218 aa10.73□□□□□ -0.69
CHCHD1-202ENST00000372837 NTF4P34130 210 aa10.73□□□□□ -0.69
CHCHD1-202ENST00000372837 LHX2P50458 406 aa10.73□□□□□ -0.69
CHCHD1-202ENST00000372837 AARDQ4LEZ3 155 aa10.73□□□□□ -0.69
CHCHD1-202ENST00000372837 DMRTC1Q5HYR2 192 aa10.73□□□□□ -0.69
CHCHD1-202ENST00000372837 COL5A1-AS1Q5SY13 56 aa10.73□□□□□ -0.69
CHCHD1-202ENST00000372837 NAXEQ8NCW5 288 aa10.73□□□□□ -0.69
CHCHD1-202ENST00000372837 OR10P1Q8NGE3 313 aa10.73□□□□□ -0.69
CHCHD1-202ENST00000372837 OR4B1Q8NGF8 309 aa10.73□□□□□ -0.69
CHCHD1-202ENST00000372837 OR10G9Q8NGN4 311 aa10.73□□□□□ -0.69
CHCHD1-202ENST00000372837 OR10G7Q8NGN6 311 aa10.73□□□□□ -0.69
CHCHD1-202ENST00000372837 ABHD3Q8WU67 409 aa10.73□□□□□ -0.69
CHCHD1-202ENST00000372837 ZNF407Q9C0G0 2248 aa10.72□□□□□ -0.69
CHCHD1-202ENST00000372837 IGKV1-6A0A0C4DH72 117 aa10.72□□□□□ -0.69
CHCHD1-202ENST00000372837 A0A1W2PPQ1 181 aa10.72□□□□□ -0.69
CHCHD1-202ENST00000372837 EREGO14944 169 aa10.72□□□□□ -0.69
CHCHD1-202ENST00000372837 RAB29O14966 203 aa10.72□□□□□ -0.69
CHCHD1-202ENST00000372837 SCGB1D1O95968 90 aa10.72□□□□□ -0.69
CHCHD1-202ENST00000372837 P0C879 139 aa10.72□□□□□ -0.69
CHCHD1-202ENST00000372837 GLI4P10075 376 aa10.72□□□□□ -0.69
CHCHD1-202ENST00000372837 IL3RAP26951 378 aa10.72□□□□□ -0.69
CHCHD1-202ENST00000372837 CLDN18P56856 261 aa10.72□□□□□ -0.69
CHCHD1-202ENST00000372837 NUFIP2Q7Z417 695 aaKnown RBP10.72□□□□□ -0.69
CHCHD1-202ENST00000372837 LINC01551Q86U37 167 aa10.72□□□□□ -0.69
CHCHD1-202ENST00000372837 HAPLN4Q86UW8 402 aa10.72□□□□□ -0.69
CHCHD1-202ENST00000372837 CPEB3Q8NE35 698 aaKnown RBP10.72□□□□□ -0.69
CHCHD1-202ENST00000372837 OR2D3Q8NGH3 330 aa10.72□□□□□ -0.69
CHCHD1-202ENST00000372837 FGFBP3Q8TAT2 258 aa10.72□□□□□ -0.69
CHCHD1-202ENST00000372837 TMEM37Q8WXS4 190 aa10.72□□□□□ -0.69
CHCHD1-202ENST00000372837 TMEM208Q9BTX3 173 aa10.72□□□□□ -0.69
CHCHD1-202ENST00000372837 POLR3KQ9Y2Y1 108 aaPredicted RBP10.72□□□□□ -0.69
CHCHD1-202ENST00000372837 WIPI2Q9Y4P8 454 aa10.72□□□□□ -0.69
CHCHD1-202ENST00000372837 C9JCJ5 164 aa10.71□□□□□ -0.69
CHCHD1-202ENST00000372837 KLRC4-KLRK1H3BQV0 150 aa10.71□□□□□ -0.69
CHCHD1-202ENST00000372837 ABCA1O95477 2261 aa10.71□□□□□ -0.69
CHCHD1-202ENST00000372837 PATE4P0C8F1 98 aa10.71□□□□□ -0.69
CHCHD1-202ENST00000372837 PSG2P11465 335 aa10.71□□□□□ -0.69
CHCHD1-202ENST00000372837 ZNF25P17030 456 aaPredicted RBP10.71□□□□□ -0.69
CHCHD1-202ENST00000372837 BCL3P20749 454 aa10.71□□□□□ -0.69
CHCHD1-202ENST00000372837 RPS20P60866 119 aaKnown RBP10.71□□□□□ -0.69
CHCHD1-202ENST00000372837 ERVS71-1P61550 626 aa10.71□□□□□ -0.69
CHCHD1-202ENST00000372837 GNG3P63215 75 aa10.71□□□□□ -0.69
CHCHD1-202ENST00000372837 PLGLB1Q02325 96 aa10.71□□□□□ -0.69
CHCHD1-202ENST00000372837 ARL16Q0P5N6 197 aa10.71□□□□□ -0.69
CHCHD1-202ENST00000372837 CATR1Q13166 79 aa10.71□□□□□ -0.69
CHCHD1-202ENST00000372837 ANKRD39Q53RE8 183 aa10.71□□□□□ -0.69
CHCHD1-202ENST00000372837 WDR73Q6P4I2 378 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms