RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 RELQ04864 619 aaPredicted RBP12.33□□□□□ -0.44
COL9A2-202ENST00000372748 SSMEM1Q8WWF3 244 aa12.33□□□□□ -0.44
COL9A2-202ENST00000372748 NINJ1Q92982 152 aa12.33□□□□□ -0.44
COL9A2-202ENST00000372748 BTF3L4Q96K17 158 aa12.33□□□□□ -0.44
COL9A2-202ENST00000372748 CNOT1A5YKK6 2376 aaKnown RBP12.33□□□□□ -0.44
COL9A2-202ENST00000372748 K7EN84 100 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 SSTR5P35346 364 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 KRTDAPP60985 99 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 ERVK11-1P61568 191 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 PSG7Q13046 419 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 ZNF826PQ6ZT77 177 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 MDP1Q86V88 176 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 FAM234AQ9H0X4 552 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 ABI3Q9P2A4 366 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 YTHDF2Q9Y5A9 579 aaKnown RBP12.32□□□□□ -0.44
COL9A2-202ENST00000372748 ZFHX2Q9C0A1 2572 aaPredicted RBP12.32□□□□□ -0.44
COL9A2-202ENST00000372748 PTPRZ1P23471 2315 aaPredicted RBP12.32□□□□□ -0.44
COL9A2-202ENST00000372748 SPTBN2O15020 2390 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 HAND1O96004 215 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 CELA3BP08861 270 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 OR9G9P0C7N8 305 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 GABRA2P47869 451 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 SELENOTP62341 195 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 PDLIM3Q53GG5 364 aaPredicted RBP12.32□□□□□ -0.44
COL9A2-202ENST00000372748 ATP1A1-AS1Q5TC04 95 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 VKORC1L1Q8N0U8 176 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 OR1L6Q8NGR2 347 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 PRR14LQ5THK1 2151 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 RAB29O14966 203 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 RPL31P62899 125 aaKnown RBP12.32□□□□□ -0.44
COL9A2-202ENST00000372748 PAFAH1B2P68402 229 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 EIF4EBP1Q13541 118 aaPredicted RBP12.32□□□□□ -0.44
COL9A2-202ENST00000372748 ZPBPQ9BS86 351 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 PSG11Q9UQ72 335 aa12.32□□□□□ -0.44
COL9A2-202ENST00000372748 SNURFLB1AK76 121 aa12.31□□□□□ -0.44
COL9A2-202ENST00000372748 TREML4Q6UXN2 200 aa12.31□□□□□ -0.44
COL9A2-202ENST00000372748 POLDIP2Q9Y2S7 368 aa12.31□□□□□ -0.44
COL9A2-202ENST00000372748 TMEM30CPA0ZSE6 113 aa12.31□□□□□ -0.44
COL9A2-202ENST00000372748 COMPP49747 757 aaPredicted RBP12.31□□□□□ -0.44
COL9A2-202ENST00000372748 SLC35B1P78383 322 aa12.31□□□□□ -0.44
COL9A2-202ENST00000372748 ZNF146Q15072 292 aa12.31□□□□□ -0.44
COL9A2-202ENST00000372748 TRIP6Q15654 476 aaKnown RBP12.31□□□□□ -0.44
COL9A2-202ENST00000372748 Q6ZR03 302 aa12.31□□□□□ -0.44
COL9A2-202ENST00000372748 LRFN3Q9BTN0 628 aa12.31□□□□□ -0.44
COL9A2-202ENST00000372748 FBXL7Q9UJT9 491 aa12.31□□□□□ -0.44
COL9A2-202ENST00000372748 KMT2EQ8IZD2 1858 aa12.3□□□□□ -0.44
COL9A2-202ENST00000372748 LNP1A1A4G5 178 aa12.3□□□□□ -0.44
COL9A2-202ENST00000372748 RANP62826 216 aaKnown RBP12.3□□□□□ -0.44
COL9A2-202ENST00000372748 KIAA1644Q3SXP7 199 aa12.3□□□□□ -0.44
COL9A2-202ENST00000372748 SPATA31B1PQ5VZV4 182 aa12.3□□□□□ -0.44
COL9A2-202ENST00000372748 ZBTB34Q8NCN2 500 aa12.3□□□□□ -0.44
COL9A2-202ENST00000372748 RAB1CQ92928 201 aa12.3□□□□□ -0.44
COL9A2-202ENST00000372748 MGST2Q99735 147 aa12.3□□□□□ -0.44
COL9A2-202ENST00000372748 MS4A5Q9H3V2 200 aa12.3□□□□□ -0.44
COL9A2-202ENST00000372748 PPP1R14DQ9NXH3 145 aa12.3□□□□□ -0.44
COL9A2-202ENST00000372748 IGHV3-13P01766 116 aa12.3□□□□□ -0.44
COL9A2-202ENST00000372748 IGHV3-7P01780 117 aa12.3□□□□□ -0.44
COL9A2-202ENST00000372748 SP1P08047 785 aa12.3□□□□□ -0.44
COL9A2-202ENST00000372748 MRPS11P82912 194 aaKnown RBP12.3□□□□□ -0.44
COL9A2-202ENST00000372748 SEPSECSQ9HD40 501 aaKnown RBP12.3□□□□□ -0.44
COL9A2-202ENST00000372748 HEYLQ9NQ87 328 aaPredicted RBP12.3□□□□□ -0.44
COL9A2-202ENST00000372748 IL36BQ9NZH7 164 aa12.3□□□□□ -0.44
COL9A2-202ENST00000372748 IL6RP08887 468 aaPredicted RBP12.29□□□□□ -0.44
COL9A2-202ENST00000372748 STAG3L2P0CL84 134 aa12.29□□□□□ -0.44
COL9A2-202ENST00000372748 STAG3L3P0CL85 134 aa12.29□□□□□ -0.44
COL9A2-202ENST00000372748 GAGE1Q13065 139 aa12.29□□□□□ -0.44
COL9A2-202ENST00000372748 MMDQ15546 238 aa12.29□□□□□ -0.44
COL9A2-202ENST00000372748 TMEM164Q5U3C3 297 aa12.29□□□□□ -0.44
COL9A2-202ENST00000372748 Q8IYB0 196 aa12.29□□□□□ -0.44
COL9A2-202ENST00000372748 ABHD12Q8N2K0 398 aa12.29□□□□□ -0.44
COL9A2-202ENST00000372748 DCTN5Q9BTE1 182 aa12.29□□□□□ -0.44
COL9A2-202ENST00000372748 M0R296 226 aa12.29□□□□□ -0.44
COL9A2-202ENST00000372748 FCGR3BO75015 233 aa12.29□□□□□ -0.44
COL9A2-202ENST00000372748 FOXH1O75593 365 aa12.29□□□□□ -0.44
COL9A2-202ENST00000372748 OR8I2Q8N0Y5 310 aa12.29□□□□□ -0.44
COL9A2-202ENST00000372748 COQ2Q96H96 371 aa12.29□□□□□ -0.44
COL9A2-202ENST00000372748 GGTLC1Q9BX51 225 aa12.29□□□□□ -0.44
COL9A2-202ENST00000372748 GNB4Q9HAV0 340 aa12.29□□□□□ -0.44
COL9A2-202ENST00000372748 CXorf1O96002 111 aa12.28□□□□□ -0.44
COL9A2-202ENST00000372748 RNFT1Q5M7Z0 435 aa12.28□□□□□ -0.44
COL9A2-202ENST00000372748 MMD2Q8IY49 270 aa12.28□□□□□ -0.44
COL9A2-202ENST00000372748 SIGLECL1Q8N7X8 197 aa12.28□□□□□ -0.44
COL9A2-202ENST00000372748 ST6GALNAC3Q8NDV1 305 aa12.28□□□□□ -0.44
COL9A2-202ENST00000372748 BCL2L2Q92843 193 aaPredicted RBP12.28□□□□□ -0.44
COL9A2-202ENST00000372748 DSPP15924 2871 aaKnown RBP12.28□□□□□ -0.44
COL9A2-202ENST00000372748 LAMA5O15230 3695 aa12.28□□□□□ -0.44
COL9A2-202ENST00000372748 FBXW9Q5XUX1 488 aa12.28□□□□□ -0.44
COL9A2-202ENST00000372748 GP6Q9HCN6 339 aa12.28□□□□□ -0.44
COL9A2-202ENST00000372748 METRNQ9UJH8 293 aa12.28□□□□□ -0.44
COL9A2-202ENST00000372748 OOEPA6NGQ2 149 aa12.28□□□□□ -0.44
COL9A2-202ENST00000372748 DIRC3C9JPN6 131 aa12.28□□□□□ -0.44
COL9A2-202ENST00000372748 SIAH2O43255 324 aa12.28□□□□□ -0.44
COL9A2-202ENST00000372748 TCF21O43680 179 aa12.28□□□□□ -0.44
COL9A2-202ENST00000372748 LGALS4P56470 323 aa12.28□□□□□ -0.44
COL9A2-202ENST00000372748 PRAMEF5Q5TYX0 476 aa12.28□□□□□ -0.44
COL9A2-202ENST00000372748 PRAMEF6Q5VXH4 476 aa12.28□□□□□ -0.44
COL9A2-202ENST00000372748 DHRS13Q6UX07 377 aa12.28□□□□□ -0.44
COL9A2-202ENST00000372748 OR13A1Q8NGR1 328 aa12.28□□□□□ -0.44
COL9A2-202ENST00000372748 TAAR6Q96RI8 345 aa12.28□□□□□ -0.44
COL9A2-202ENST00000372748 OPN3Q9H1Y3 402 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms