RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 SPANXN5Q5MJ07 72 aa13.07□□□□□ -0.32
C9orf78-201ENST00000372447 LINC01356Q8N9X3 169 aa13.07□□□□□ -0.32
C9orf78-201ENST00000372447 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.07□□□□□ -0.32
C9orf78-201ENST00000372447 SUN5Q8TC36 379 aa13.07□□□□□ -0.32
C9orf78-201ENST00000372447 TMEM231Q9H6L2 316 aa13.07□□□□□ -0.32
C9orf78-201ENST00000372447 PRELID3BQ9Y3B1 194 aa13.07□□□□□ -0.32
C9orf78-201ENST00000372447 LINC00312Q9Y6C7 94 aa13.07□□□□□ -0.32
C9orf78-201ENST00000372447 UMAD1C9J7I0 102 aa13.06□□□□□ -0.32
C9orf78-201ENST00000372447 FOXH1O75593 365 aa13.06□□□□□ -0.32
C9orf78-201ENST00000372447 IFNA5P01569 189 aa13.06□□□□□ -0.32
C9orf78-201ENST00000372447 MSMBP08118 114 aa13.06□□□□□ -0.32
C9orf78-201ENST00000372447 KIR2DS2P43631 304 aa13.06□□□□□ -0.32
C9orf78-201ENST00000372447 HBG1P69891 147 aa13.06□□□□□ -0.32
C9orf78-201ENST00000372447 HBG2P69892 147 aa13.06□□□□□ -0.32
C9orf78-201ENST00000372447 DEFA5Q01523 94 aa13.06□□□□□ -0.32
C9orf78-201ENST00000372447 CYB5R2Q6BCY4 276 aa13.06□□□□□ -0.32
C9orf78-201ENST00000372447 ZNF439Q8NDP4 499 aa13.06□□□□□ -0.32
C9orf78-201ENST00000372447 S1PR3Q99500 378 aa13.06□□□□□ -0.32
C9orf78-201ENST00000372447 SMR3AQ99954 134 aa13.06□□□□□ -0.32
C9orf78-201ENST00000372447 UQCC1Q9NVA1 299 aa13.06□□□□□ -0.32
C9orf78-201ENST00000372447 TMA7Q9Y2S6 64 aaKnown RBP13.06□□□□□ -0.32
C9orf78-201ENST00000372447 POLR3KQ9Y2Y1 108 aaPredicted RBP13.06□□□□□ -0.32
C9orf78-201ENST00000372447 FAM96BQ9Y3D0 163 aa13.06□□□□□ -0.32
C9orf78-201ENST00000372447 RFNGQ9Y644 331 aa13.06□□□□□ -0.32
C9orf78-201ENST00000372447 A0A1W2PPE3 182 aa13.05□□□□□ -0.32
C9orf78-201ENST00000372447 C22orf46C9J442 243 aa13.05□□□□□ -0.32
C9orf78-201ENST00000372447 RNASEK-C17orf49H0YIS7 233 aa13.05□□□□□ -0.32
C9orf78-201ENST00000372447 GPR37O15354 613 aa13.05□□□□□ -0.32
C9orf78-201ENST00000372447 TGFAP01135 160 aa13.05□□□□□ -0.32
C9orf78-201ENST00000372447 MEF2CQ06413 473 aaPredicted RBP13.05□□□□□ -0.32
C9orf78-201ENST00000372447 KRTAP1-1Q07627 177 aa13.05□□□□□ -0.32
C9orf78-201ENST00000372447 ARL16Q0P5N6 197 aa13.05□□□□□ -0.32
C9orf78-201ENST00000372447 C1orf229Q6ZS94 237 aaPredicted RBP13.05□□□□□ -0.32
C9orf78-201ENST00000372447 HAPLN4Q86UW8 402 aa13.05□□□□□ -0.32
C9orf78-201ENST00000372447 COMMD1Q8N668 190 aa13.05□□□□□ -0.32
C9orf78-201ENST00000372447 FAM213BQ8TBF2 198 aa13.05□□□□□ -0.32
C9orf78-201ENST00000372447 RPUSD1Q9UJJ7 312 aaKnown RBP13.05□□□□□ -0.32
C9orf78-201ENST00000372447 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.05□□□□□ -0.32
C9orf78-201ENST00000372447 TLN2Q9Y4G6 2542 aa13.05□□□□□ -0.32
C9orf78-201ENST00000372447 F8P00451 2351 aa13.05□□□□□ -0.32
C9orf78-201ENST00000372447 LOC105371242A0A075B767 164 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 SAA2-SAA4A0A096LPE2 208 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 RBMXL2O75526 392 aaKnown RBP13.04□□□□□ -0.32
C9orf78-201ENST00000372447 MMP23AO75900 390 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 CD5P06127 495 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 SAA2P0DJI9 122 aaPredicted RBP13.04□□□□□ -0.32
C9orf78-201ENST00000372447 FOSL1P15407 271 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 ADCYAP1P18509 176 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 SNCAP37840 140 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 ARHGDIBP52566 201 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 RPL31P62899 125 aaKnown RBP13.04□□□□□ -0.32
C9orf78-201ENST00000372447 RUNX1Q01196 453 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 PAX2Q02962 417 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 C10orf91Q5T1B1 145 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 PRAMEF5Q5TYX0 476 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 SLC25A24Q6NUK1 477 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 TMEM14EPQ6UXP3 125 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 DDB2Q92466 427 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 H1FXQ92522 213 aaKnown RBP13.04□□□□□ -0.32
C9orf78-201ENST00000372447 FAM90A9PA6NNJ1 464 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 F8W036 122 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 DVL1P1P54792 670 aaPredicted RBP13.04□□□□□ -0.32
C9orf78-201ENST00000372447 ZNF273Q14593 569 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 ATRAIDQ6UW56 229 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 LYG1Q8N1E2 194 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 OR10A7Q8NGE5 316 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 DTD1Q8TEA8 209 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 CIB3Q96Q77 187 aaPredicted RBP13.04□□□□□ -0.32
C9orf78-201ENST00000372447 ZNF251Q9BRH9 671 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 GAL3ST2Q9H3Q3 398 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 HIF1ANQ9NWT6 349 aa13.04□□□□□ -0.32
C9orf78-201ENST00000372447 OR9G9P0C7N8 305 aa13.03□□□□□ -0.32
C9orf78-201ENST00000372447 THBS3P49746 956 aa13.03□□□□□ -0.32
C9orf78-201ENST00000372447 GNG10P50151 68 aa13.03□□□□□ -0.32
C9orf78-201ENST00000372447 BTN1A1Q13410 526 aa13.03□□□□□ -0.32
C9orf78-201ENST00000372447 SLC25A48Q6ZT89 311 aaKnown RBP13.03□□□□□ -0.32
C9orf78-201ENST00000372447 THNSL2Q86YJ6 484 aa13.03□□□□□ -0.32
C9orf78-201ENST00000372447 LILRB2Q8N423 598 aa13.03□□□□□ -0.32
C9orf78-201ENST00000372447 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.03□□□□□ -0.32
C9orf78-201ENST00000372447 SCGB1C1Q8TD33 95 aa13.03□□□□□ -0.32
C9orf78-201ENST00000372447 TMEM186Q96B77 213 aa13.03□□□□□ -0.32
C9orf78-201ENST00000372447 SEC11CQ9BY50 192 aa13.03□□□□□ -0.32
C9orf78-201ENST00000372447 WNK2Q9Y3S1 2297 aa13.03□□□□□ -0.32
C9orf78-201ENST00000372447 NQO2P16083 231 aa13.02□□□□□ -0.32
C9orf78-201ENST00000372447 ERVK-16P61578 105 aa13.02□□□□□ -0.32
C9orf78-201ENST00000372447 AARDQ4LEZ3 155 aa13.02□□□□□ -0.32
C9orf78-201ENST00000372447 SVBPQ8N300 66 aa13.02□□□□□ -0.32
C9orf78-201ENST00000372447 OR4S2Q8NH73 311 aa13.02□□□□□ -0.32
C9orf78-201ENST00000372447 ZDHHC16Q969W1 377 aa13.02□□□□□ -0.32
C9orf78-201ENST00000372447 ADTRPQ96IZ2 230 aa13.02□□□□□ -0.32
C9orf78-201ENST00000372447 OR4C12Q96R67 309 aa13.02□□□□□ -0.32
C9orf78-201ENST00000372447 QTRT1Q9BXR0 403 aaKnown RBP13.02□□□□□ -0.32
C9orf78-201ENST00000372447 CARHSP1Q9Y2V2 147 aaKnown RBP13.02□□□□□ -0.32
C9orf78-201ENST00000372447 DSCAML1Q8TD84 2053 aa13.02□□□□□ -0.33
C9orf78-201ENST00000372447 TRAV20A0A0B4J274 112 aa13.02□□□□□ -0.33
C9orf78-201ENST00000372447 PPIAL4CA0A0B4J2A2 164 aa13.02□□□□□ -0.33
C9orf78-201ENST00000372447 IGHV2-70DA0A0C4DH43 119 aa13.02□□□□□ -0.33
C9orf78-201ENST00000372447 CEBPZOSA8MTT3 80 aa13.02□□□□□ -0.33
C9orf78-201ENST00000372447 CD5LO43866 347 aa13.02□□□□□ -0.33
C9orf78-201ENST00000372447 SLC38A11Q08AI6 406 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 971.2 ms