RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 CXorf66Q5JRM2 361 aaPredicted RBP11.65□□□□□ -0.55
COL9A1-204ENST00000370496 OR4A47Q6IF82 309 aa11.65□□□□□ -0.55
COL9A1-204ENST00000370496 UNQ5815/PRO19632Q6UWF5 114 aa11.65□□□□□ -0.55
COL9A1-204ENST00000370496 MMD2Q8IY49 270 aa11.65□□□□□ -0.55
COL9A1-204ENST00000370496 DEDD2Q8WXF8 326 aa11.65□□□□□ -0.55
COL9A1-204ENST00000370496 MRGPRFQ96AM1 343 aa11.65□□□□□ -0.55
COL9A1-204ENST00000370496 FOXA2Q9Y261 457 aaPredicted RBP11.65□□□□□ -0.55
COL9A1-204ENST00000370496 PLXNB1O43157 2135 aa11.64□□□□□ -0.55
COL9A1-204ENST00000370496 MARCH11A6NNE9 402 aa11.64□□□□□ -0.55
COL9A1-204ENST00000370496 MPPED1O15442 326 aa11.64□□□□□ -0.55
COL9A1-204ENST00000370496 TSPAN15O95858 294 aa11.64□□□□□ -0.55
COL9A1-204ENST00000370496 IGHG4P01861 327 aa11.64□□□□□ -0.55
COL9A1-204ENST00000370496 RPA2P15927 270 aa11.64□□□□□ -0.55
COL9A1-204ENST00000370496 LPAR6P43657 344 aa11.64□□□□□ -0.55
COL9A1-204ENST00000370496 CRIP2P52943 208 aaPredicted RBP11.64□□□□□ -0.55
COL9A1-204ENST00000370496 CD83Q01151 205 aa11.64□□□□□ -0.55
COL9A1-204ENST00000370496 FOXE3Q13461 319 aa11.64□□□□□ -0.55
COL9A1-204ENST00000370496 PUSL1Q8N0Z8 303 aaKnown RBP11.64□□□□□ -0.55
COL9A1-204ENST00000370496 TMEM140Q9NV12 185 aa11.64□□□□□ -0.55
COL9A1-204ENST00000370496 BET1LQ9NYM9 111 aa11.64□□□□□ -0.55
COL9A1-204ENST00000370496 NUDT19A8MXV4 375 aa11.63□□□□□ -0.55
COL9A1-204ENST00000370496 H0Y980 276 aa11.63□□□□□ -0.55
COL9A1-204ENST00000370496 SERPINE2P07093 398 aa11.63□□□□□ -0.55
COL9A1-204ENST00000370496 ELANEP08246 267 aa11.63□□□□□ -0.55
COL9A1-204ENST00000370496 PF4V1P10720 104 aa11.63□□□□□ -0.55
COL9A1-204ENST00000370496 SSBP2P81877 361 aaPredicted RBP11.63□□□□□ -0.55
COL9A1-204ENST00000370496 BAK1Q16611 211 aa11.63□□□□□ -0.55
COL9A1-204ENST00000370496 POU2AF1Q16633 256 aa11.63□□□□□ -0.55
COL9A1-204ENST00000370496 PRR31Q5SQ13 230 aa11.63□□□□□ -0.55
COL9A1-204ENST00000370496 TMEM65Q6PI78 240 aa11.63□□□□□ -0.55
COL9A1-204ENST00000370496 LCNL1Q6ZST4 164 aa11.63□□□□□ -0.55
COL9A1-204ENST00000370496 LFNGQ8NES3 379 aa11.63□□□□□ -0.55
COL9A1-204ENST00000370496 OR4A5Q8NH83 315 aa11.63□□□□□ -0.55
COL9A1-204ENST00000370496 TMEM167AQ8TBQ9 72 aa11.63□□□□□ -0.55
COL9A1-204ENST00000370496 SRSF12Q8WXF0 261 aaKnown RBP11.63□□□□□ -0.55
COL9A1-204ENST00000370496 SCGB3A2Q96PL1 93 aa11.63□□□□□ -0.55
COL9A1-204ENST00000370496 AKIP1Q9NQ31 210 aa11.63□□□□□ -0.55
COL9A1-204ENST00000370496 FAM212BQ9NTI7 297 aaPredicted RBP11.63□□□□□ -0.55
COL9A1-204ENST00000370496 TEX13DA0A0J9YY54 714 aaPredicted RBP11.62□□□□□ -0.55
COL9A1-204ENST00000370496 C3orf85A0A1B0GTC6 90 aa11.62□□□□□ -0.55
COL9A1-204ENST00000370496 KRASP01116 189 aa11.62□□□□□ -0.55
COL9A1-204ENST00000370496 RPLP1P05386 114 aaKnown RBP11.62□□□□□ -0.55
COL9A1-204ENST00000370496 APELAP0DMC3 54 aa11.62□□□□□ -0.55
COL9A1-204ENST00000370496 EGR2P11161 476 aaPredicted RBP11.62□□□□□ -0.55
COL9A1-204ENST00000370496 IL7P13232 177 aa11.62□□□□□ -0.55
COL9A1-204ENST00000370496 CD40LGP29965 261 aa11.62□□□□□ -0.55
COL9A1-204ENST00000370496 PPIFP30405 207 aaKnown RBP11.62□□□□□ -0.55
COL9A1-204ENST00000370496 RPL23AP62750 156 aaKnown RBP11.62□□□□□ -0.55
COL9A1-204ENST00000370496 RPL8P62917 257 aaKnown RBP11.62□□□□□ -0.55
COL9A1-204ENST00000370496 MRGPRG-AS1Q2M3A8 158 aa11.62□□□□□ -0.55
COL9A1-204ENST00000370496 TRIM16LQ309B1 348 aa11.62□□□□□ -0.55
COL9A1-204ENST00000370496 AKIRIN2Q53H80 203 aa11.62□□□□□ -0.55
COL9A1-204ENST00000370496 C10orf55Q5SWW7 151 aa11.62□□□□□ -0.55
COL9A1-204ENST00000370496 LINC00299Q6ZSB3 139 aa11.62□□□□□ -0.55
COL9A1-204ENST00000370496 KLHL30-AS1Q8NEE0 82 aa11.62□□□□□ -0.55
COL9A1-204ENST00000370496 OR4F17Q8NGA8 305 aa11.62□□□□□ -0.55
COL9A1-204ENST00000370496 OR5M8Q8NGP6 311 aa11.62□□□□□ -0.55
COL9A1-204ENST00000370496 S100ZQ8WXG8 99 aa11.62□□□□□ -0.55
COL9A1-204ENST00000370496 OR4F4Q96R69 305 aa11.62□□□□□ -0.55
COL9A1-204ENST00000370496 SDHCQ99643 169 aaPredicted RBP11.62□□□□□ -0.55
COL9A1-204ENST00000370496 C5orf66Q9H5L9 145 aa11.62□□□□□ -0.55
COL9A1-204ENST00000370496 LINC00854A0A1B0GVQ3 168 aa11.61□□□□□ -0.55
COL9A1-204ENST00000370496 ADARB2-AS1A8MUL3 147 aa11.61□□□□□ -0.55
COL9A1-204ENST00000370496 HLA-GP17693 338 aa11.61□□□□□ -0.55
COL9A1-204ENST00000370496 PSMB8P28062 276 aa11.61□□□□□ -0.55
COL9A1-204ENST00000370496 MAS1LP35410 378 aa11.61□□□□□ -0.55
COL9A1-204ENST00000370496 G6PCP35575 357 aa11.61□□□□□ -0.55
COL9A1-204ENST00000370496 RPL27AP46776 148 aaKnown RBP11.61□□□□□ -0.55
COL9A1-204ENST00000370496 ZNF585BQ52M93 769 aa11.61□□□□□ -0.55
COL9A1-204ENST00000370496 C19orf54Q5BKX5 351 aa11.61□□□□□ -0.55
COL9A1-204ENST00000370496 MINDY2Q8NBR6 621 aa11.61□□□□□ -0.55
COL9A1-204ENST00000370496 TP53RKQ96S44 253 aa11.61□□□□□ -0.55
COL9A1-204ENST00000370496 SPIN2AQ99865 258 aa11.61□□□□□ -0.55
COL9A1-204ENST00000370496 SPIN2BQ9BPZ2 258 aa11.61□□□□□ -0.55
COL9A1-204ENST00000370496 NAA60Q9H7X0 242 aa11.61□□□□□ -0.55
COL9A1-204ENST00000370496 VSIG4Q9Y279 399 aa11.61□□□□□ -0.55
COL9A1-204ENST00000370496 NUBP2Q9Y5Y2 271 aa11.61□□□□□ -0.55
COL9A1-204ENST00000370496 MSGN1A6NI15 193 aa11.6□□□□□ -0.55
COL9A1-204ENST00000370496 CENPXA8MT69 81 aa11.6□□□□□ -0.55
COL9A1-204ENST00000370496 B3GALNT1O75752 331 aa11.6□□□□□ -0.55
COL9A1-204ENST00000370496 IGLV1-40P01703 118 aa11.6□□□□□ -0.55
COL9A1-204ENST00000370496 AKR1C2P52895 323 aa11.6□□□□□ -0.55
COL9A1-204ENST00000370496 TMED4Q7Z7H5 227 aa11.6□□□□□ -0.55
COL9A1-204ENST00000370496 RNF152Q8N8N0 203 aa11.6□□□□□ -0.55
COL9A1-204ENST00000370496 RNASE11Q8TAA1 199 aaKnown RBP11.6□□□□□ -0.55
COL9A1-204ENST00000370496 FAM110DQ8TAY7 271 aaPredicted RBP11.6□□□□□ -0.55
COL9A1-204ENST00000370496 CASTOR1Q8WTX7 329 aa11.6□□□□□ -0.55
COL9A1-204ENST00000370496 FYTTD1Q96QD9 318 aaKnown RBP11.6□□□□□ -0.55
COL9A1-204ENST00000370496 RTBDNQ9BSG5 229 aaPredicted RBP11.6□□□□□ -0.55
COL9A1-204ENST00000370496 CCDC32Q9BV29 185 aa11.6□□□□□ -0.55
COL9A1-204ENST00000370496 COMMD5Q9GZQ3 224 aa11.6□□□□□ -0.55
COL9A1-204ENST00000370496 ZNF355PQ9NSJ1 428 aa11.6□□□□□ -0.55
COL9A1-204ENST00000370496 ZFP57Q9NU63 452 aa11.6□□□□□ -0.55
COL9A1-204ENST00000370496 GPR132Q9UNW8 380 aa11.6□□□□□ -0.55
COL9A1-204ENST00000370496 NAP1L6A6NFF2 107 aa11.59□□□□□ -0.55
COL9A1-204ENST00000370496 CRYM-AS1A6NIL9 109 aa11.59□□□□□ -0.55
COL9A1-204ENST00000370496 UPK2O00526 184 aa11.59□□□□□ -0.55
COL9A1-204ENST00000370496 SOX15O60248 233 aa11.59□□□□□ -0.55
COL9A1-204ENST00000370496 SNAPC5O75971 98 aa11.59□□□□□ -0.55
COL9A1-204ENST00000370496 ATG12O94817 140 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms