RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 HIST1H4GQ99525 98 aa15.27■□□□□ 0.04
SNX27-203ENST00000368843 SMIM10L1P0DMW3 83 aa15.27■□□□□ 0.04
SNX27-203ENST00000368843 KIAA1644Q3SXP7 199 aa15.27■□□□□ 0.04
SNX27-203ENST00000368843 SMIM10Q96HG1 83 aa15.27■□□□□ 0.04
SNX27-203ENST00000368843 CIRBPQ14011 172 aaKnown RBP15.27■□□□□ 0.03
SNX27-203ENST00000368843 TBL2Q9Y4P3 447 aaKnown RBP15.27■□□□□ 0.03
SNX27-203ENST00000368843 A0A0G2JMM0 328 aa15.27■□□□□ 0.03
SNX27-203ENST00000368843 A0A1W2PPB8 328 aa15.27■□□□□ 0.03
SNX27-203ENST00000368843 A0A1W2PRS3 328 aa15.27■□□□□ 0.03
SNX27-203ENST00000368843 KIR3DP1A8MWS1 328 aa15.27■□□□□ 0.03
SNX27-203ENST00000368843 PRSS2P07478 247 aa15.27■□□□□ 0.03
SNX27-203ENST00000368843 OR13C6PQ8NH95 151 aa15.27■□□□□ 0.03
SNX27-203ENST00000368843 CFDP00746 253 aaPredicted RBP15.26■□□□□ 0.03
SNX27-203ENST00000368843 C8orf88P0DMB2 117 aa15.26■□□□□ 0.03
SNX27-203ENST00000368843 GOLT1AQ6ZVE7 132 aa15.26■□□□□ 0.03
SNX27-203ENST00000368843 NPIPB3Q92617 1050 aa15.26■□□□□ 0.03
SNX27-203ENST00000368843 COX6CP09669 75 aa15.26■□□□□ 0.03
SNX27-203ENST00000368843 LINC00305Q7Z4B0 112 aa15.26■□□□□ 0.03
SNX27-203ENST00000368843 DUX3Q96PT4 197 aa15.26■□□□□ 0.03
SNX27-203ENST00000368843 KCNE5Q9UJ90 142 aa15.26■□□□□ 0.03
SNX27-203ENST00000368843 BRWD1Q9NSI6 2320 aa15.26■□□□□ 0.03
SNX27-203ENST00000368843 HKR1P10072 659 aa15.26■□□□□ 0.03
SNX27-203ENST00000368843 G6PC2Q9NQR9 355 aa15.26■□□□□ 0.03
SNX27-203ENST00000368843 CEACAM4O75871 244 aa15.26■□□□□ 0.03
SNX27-203ENST00000368843 CECR9P0C854 216 aa15.26■□□□□ 0.03
SNX27-203ENST00000368843 MUC1P15941 1255 aaPredicted RBP15.26■□□□□ 0.03
SNX27-203ENST00000368843 PET117Q6UWS5 81 aa15.26■□□□□ 0.03
SNX27-203ENST00000368843 COL5A1-AS1Q5SY13 56 aa15.26■□□□□ 0.03
SNX27-203ENST00000368843 STPG2Q8N412 459 aa15.26■□□□□ 0.03
SNX27-203ENST00000368843 IGHV3OR16-8A0A075B7F1 116 aa15.25■□□□□ 0.03
SNX27-203ENST00000368843 TRGC2P03986 189 aa15.25■□□□□ 0.03
SNX27-203ENST00000368843 P2RY4P51582 365 aa15.25■□□□□ 0.03
SNX27-203ENST00000368843 TMEM45BQ96B21 275 aa15.25■□□□□ 0.03
SNX27-203ENST00000368843 CXCL2P19875 107 aa15.25■□□□□ 0.03
SNX27-203ENST00000368843 CRYBB3P26998 211 aa15.25■□□□□ 0.03
SNX27-203ENST00000368843 TNFSF10P50591 281 aa15.25■□□□□ 0.03
SNX27-203ENST00000368843 ACP7Q6ZNF0 438 aa15.25■□□□□ 0.03
SNX27-203ENST00000368843 TMEM101Q96IK0 257 aa15.25■□□□□ 0.03
SNX27-203ENST00000368843 FBXL15Q9H469 300 aa15.25■□□□□ 0.03
SNX27-203ENST00000368843 TUBD1Q9UJT1 453 aa15.25■□□□□ 0.03
SNX27-203ENST00000368843 TCF19Q9Y242 345 aa15.25■□□□□ 0.03
SNX27-203ENST00000368843 PATJQ8NI35 1801 aa15.25■□□□□ 0.03
SNX27-203ENST00000368843 RBFOX2O43251 390 aaKnown RBP eCLIP15.25■□□□□ 0.037e-16■■■■■ 58.5
SNX27-203ENST00000368843 GLRXP35754 106 aa15.25■□□□□ 0.03
SNX27-203ENST00000368843 IGKV1D-42A0A075B6H8 117 aa15.25■□□□□ 0.03
SNX27-203ENST00000368843 LY6DQ14210 128 aa15.25■□□□□ 0.03
SNX27-203ENST00000368843 Q96M66 194 aa15.25■□□□□ 0.03
SNX27-203ENST00000368843 ZNF646O15015 1829 aaPredicted RBP15.25■□□□□ 0.03
SNX27-203ENST00000368843 TMEM105Q8N8V8 129 aa15.24■□□□□ 0.03
SNX27-203ENST00000368843 MARVELD3Q96A59 401 aa15.24■□□□□ 0.03
SNX27-203ENST00000368843 TRGC1P0CF51 173 aa15.24■□□□□ 0.03
SNX27-203ENST00000368843 SUMO2P61956 95 aaKnown RBP15.24■□□□□ 0.03
SNX27-203ENST00000368843 PPP1R27Q86WC6 154 aa15.24■□□□□ 0.03
SNX27-203ENST00000368843 GPR132Q9UNW8 380 aa15.24■□□□□ 0.03
SNX27-203ENST00000368843 CHCHD2Q9Y6H1 151 aaPredicted RBP15.24■□□□□ 0.03
SNX27-203ENST00000368843 CXorf65A6NEN9 183 aa15.24■□□□□ 0.03
SNX27-203ENST00000368843 TMEM30BQ3MIR4 351 aa15.24■□□□□ 0.03
SNX27-203ENST00000368843 FOXA2Q9Y261 457 aaPredicted RBP15.24■□□□□ 0.03
SNX27-203ENST00000368843 DRAM1Q8N682 238 aa15.24■□□□□ 0.03
SNX27-203ENST00000368843 IGKV3D-20A0A0C4DH25 116 aa15.23■□□□□ 0.03
SNX27-203ENST00000368843 HLA-DQB1P01920 261 aa15.23■□□□□ 0.03
SNX27-203ENST00000368843 VDAC2P45880 294 aaPredicted RBP15.23■□□□□ 0.03
SNX27-203ENST00000368843 ST6GALNAC3Q8NDV1 305 aa15.23■□□□□ 0.03
SNX27-203ENST00000368843 FBXL7Q9UJT9 491 aa15.23■□□□□ 0.03
SNX27-203ENST00000368843 TAF1LQ8IZX4 1826 aa15.23■□□□□ 0.03
SNX27-203ENST00000368843 MRPL18Q9H0U6 180 aaKnown RBP15.23■□□□□ 0.03
SNX27-203ENST00000368843 CLEC19AQ6UXS0 136 aa15.23■□□□□ 0.03
SNX27-203ENST00000368843 LINC00470Q9BZP3 86 aa15.23■□□□□ 0.03
SNX27-203ENST00000368843 PSME4Q14997 1843 aa15.23■□□□□ 0.03
SNX27-203ENST00000368843 ZNF418Q8TF45 676 aaPredicted RBP15.23■□□□□ 0.03
SNX27-203ENST00000368843 CKAP5Q14008 2032 aa15.23■□□□□ 0.03
SNX27-203ENST00000368843 KIR2DL4Q99706 377 aa15.23■□□□□ 0.03
SNX27-203ENST00000368843 SCN8AQ9UQD0 1980 aa15.23■□□□□ 0.03
SNX27-203ENST00000368843 SOD3P08294 240 aa15.22■□□□□ 0.03
SNX27-203ENST00000368843 ZNF883P0CG24 379 aa15.22■□□□□ 0.03
SNX27-203ENST00000368843 PKIAP61925 76 aa15.22■□□□□ 0.03
SNX27-203ENST00000368843 C1QTNF12Q5T7M4 302 aa15.22■□□□□ 0.03
SNX27-203ENST00000368843 COPS9Q8WXC6 57 aa15.22■□□□□ 0.03
SNX27-203ENST00000368843 PARLQ9H300 379 aa15.22■□□□□ 0.03
SNX27-203ENST00000368843 GRIFINA4D1Z8 144 aa15.22■□□□□ 0.03
SNX27-203ENST00000368843 MEF2BQ02080 365 aaPredicted RBP15.22■□□□□ 0.03
SNX27-203ENST00000368843 COLCA1Q6ZS62 124 aa15.22■□□□□ 0.03
SNX27-203ENST00000368843 SBF2Q86WG5 1849 aa15.22■□□□□ 0.03
SNX27-203ENST00000368843 KLF4O43474 513 aa15.22■□□□□ 0.03
SNX27-203ENST00000368843 IGHV1-2P23083 117 aa15.22■□□□□ 0.03
SNX27-203ENST00000368843 GPR183P32249 361 aa15.22■□□□□ 0.03
SNX27-203ENST00000368843 SNAI2O43623 268 aa15.21■□□□□ 0.03
SNX27-203ENST00000368843 CYP2G1PQ6ZSU1 146 aa15.21■□□□□ 0.03
SNX27-203ENST00000368843 ARPC1AQ92747 370 aa15.21■□□□□ 0.03
SNX27-203ENST00000368843 LINC01587Q99440 93 aa15.21■□□□□ 0.03
SNX27-203ENST00000368843 NABP2Q9BQ15 211 aa15.21■□□□□ 0.03
SNX27-203ENST00000368843 DPM3Q9P2X0 92 aa15.21■□□□□ 0.03
SNX27-203ENST00000368843 TRBV5-7A0A0A0MS05 114 aa15.21■□□□□ 0.03
SNX27-203ENST00000368843 FAM90A26D6RGX4 464 aa15.21■□□□□ 0.03
SNX27-203ENST00000368843 RNASE4P34096 147 aaKnown RBP15.21■□□□□ 0.03
SNX27-203ENST00000368843 ASPHD2Q6ICH7 369 aa15.21■□□□□ 0.03
SNX27-203ENST00000368843 IGHV2OR16-5A0A0B4J2B6 119 aa15.21■□□□□ 0.03
SNX27-203ENST00000368843 H0YL77 283 aa15.21■□□□□ 0.03
SNX27-203ENST00000368843 RAMP1O60894 148 aa15.21■□□□□ 0.03
SNX27-203ENST00000368843 FAM216BQ8N7L0 139 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms