RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 STPG2Q8N412 459 aa15.45■□□□□ 0.06
SNX27-202ENST00000368841 ZNF107Q9UII5 783 aaPredicted RBP15.45■□□□□ 0.06
SNX27-202ENST00000368841 SLC17A3O00476 420 aa15.45■□□□□ 0.06
SNX27-202ENST00000368841 C8orf88P0DMB2 117 aa15.45■□□□□ 0.06
SNX27-202ENST00000368841 RPS11P62280 158 aaKnown RBP eCLIP15.45■□□□□ 0.06
SNX27-202ENST00000368841 ZNF345Q14585 488 aa15.45■□□□□ 0.06
SNX27-202ENST00000368841 CENPWQ5EE01 88 aa15.45■□□□□ 0.06
SNX27-202ENST00000368841 SMIM6P0DI80 62 aa15.45■□□□□ 0.06
SNX27-202ENST00000368841 DRAM1Q8N682 238 aa15.45■□□□□ 0.06
SNX27-202ENST00000368841 SFRP2Q96HF1 295 aa15.45■□□□□ 0.06
SNX27-202ENST00000368841 CBLN1P23435 193 aa15.45■□□□□ 0.06
SNX27-202ENST00000368841 STARD6P59095 220 aa15.45■□□□□ 0.06
SNX27-202ENST00000368841 LBHQ53QV2 105 aaPredicted RBP15.44■□□□□ 0.06
SNX27-202ENST00000368841 TMEM101Q96IK0 257 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 TUBD1Q9UJT1 453 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 TRAV24A0A0B4J272 114 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 GATA2P23769 480 aaPredicted RBP15.44■□□□□ 0.06
SNX27-202ENST00000368841 SERF2P84101 59 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 PRR31Q5SQ13 230 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 VAX1Q5SQQ9 334 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 FAM71F2Q6NXP2 309 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 G6PC2Q9NQR9 355 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 IMMP2LQ96T52 175 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 DICER1Q9UPY3 1922 aaKnown RBP15.44■□□□□ 0.06
SNX27-202ENST00000368841 LY75O60449 1722 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 CD1AP06126 327 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 RND3P61587 244 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 HSPE1P61604 102 aaKnown RBP15.44■□□□□ 0.06
SNX27-202ENST00000368841 NUDT10Q8NFP7 164 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 NUDT11Q96G61 164 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 TCF19Q9Y242 345 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 TRAV12-3A0A0B4J271 114 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 AGAP20933 346 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 TTC32Q5I0X7 151 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 PARD6GQ9BYG4 376 aaPredicted RBP15.44■□□□□ 0.06
SNX27-202ENST00000368841 C3orf36Q3SXR2 165 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 ASPHD2Q6ICH7 369 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 FAM216BQ8N7L0 139 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 TNFRSF18Q9Y5U5 241 aa15.44■□□□□ 0.06
SNX27-202ENST00000368841 CGAP01215 116 aa15.43■□□□□ 0.06
SNX27-202ENST00000368841 SFTA2Q6UW10 78 aa15.43■□□□□ 0.06
SNX27-202ENST00000368841 AQP10Q96PS8 301 aa15.43■□□□□ 0.06
SNX27-202ENST00000368841 GPR132Q9UNW8 380 aa15.43■□□□□ 0.06
SNX27-202ENST00000368841 Q5BKY6 102 aa15.43■□□□□ 0.06
SNX27-202ENST00000368841 KIR3DL3Q8N743 410 aa15.43■□□□□ 0.06
SNX27-202ENST00000368841 OR9G1Q8NH87 305 aa15.43■□□□□ 0.06
SNX27-202ENST00000368841 LINC00862A6NCI5 91 aa15.43■□□□□ 0.06
SNX27-202ENST00000368841 K7ERU9 68 aa15.43■□□□□ 0.06
SNX27-202ENST00000368841 SYNGR3O43761 229 aa15.43■□□□□ 0.06
SNX27-202ENST00000368841 IGFBP2P18065 325 aa15.43■□□□□ 0.06
SNX27-202ENST00000368841 PUSL1Q8N0Z8 303 aaKnown RBP15.43■□□□□ 0.06
SNX27-202ENST00000368841 SLC25A38Q96DW6 304 aa15.43■□□□□ 0.06
SNX27-202ENST00000368841 TRBV5-5A0A0J9YX44 114 aa15.42■□□□□ 0.06
SNX27-202ENST00000368841 ZNF660Q6AZW8 331 aaPredicted RBP15.42■□□□□ 0.06
SNX27-202ENST00000368841 TMEM70Q9BUB7 260 aa15.42■□□□□ 0.06
SNX27-202ENST00000368841 SOX21Q9Y651 276 aaPredicted RBP15.42■□□□□ 0.06
SNX27-202ENST00000368841 CYP2G1PQ6ZSU1 146 aa15.42■□□□□ 0.06
SNX27-202ENST00000368841 KIR2DL4Q99706 377 aa15.42■□□□□ 0.06
SNX27-202ENST00000368841 FBXL7Q9UJT9 491 aa15.42■□□□□ 0.06
SNX27-202ENST00000368841 CDC42EP3Q9UKI2 254 aa15.42■□□□□ 0.06
SNX27-202ENST00000368841 TDGF1P13385 188 aa15.42■□□□□ 0.06
SNX27-202ENST00000368841 FSTP19883 344 aa15.42■□□□□ 0.06
SNX27-202ENST00000368841 CLPPQ16740 277 aaPredicted RBP15.42■□□□□ 0.06
SNX27-202ENST00000368841 C1QL2Q7Z5L3 287 aa15.42■□□□□ 0.06
SNX27-202ENST00000368841 DNASE2BQ8WZ79 361 aa15.42■□□□□ 0.06
SNX27-202ENST00000368841 MTCL1Q9Y4B5 1905 aaKnown RBP15.42■□□□□ 0.06
SNX27-202ENST00000368841 CFDP00746 253 aaPredicted RBP15.42■□□□□ 0.06
SNX27-202ENST00000368841 LEMD1Q68G75 181 aa15.42■□□□□ 0.06
SNX27-202ENST00000368841 ZCCHC24Q8N2G6 241 aaKnown RBP15.42■□□□□ 0.06
SNX27-202ENST00000368841 LNP1A1A4G5 178 aa15.42■□□□□ 0.06
SNX27-202ENST00000368841 TMEM95Q3KNT9 176 aa15.42■□□□□ 0.06
SNX27-202ENST00000368841 RNASEH2CQ8TDP1 164 aaKnown RBP15.42■□□□□ 0.06
SNX27-202ENST00000368841 DNAL4O96015 105 aa15.41■□□□□ 0.06
SNX27-202ENST00000368841 OR5P3Q8WZ94 311 aa15.41■□□□□ 0.06
SNX27-202ENST00000368841 COL18A1P39060 1754 aa15.41■□□□□ 0.06
SNX27-202ENST00000368841 IGKV1D-42A0A075B6H8 117 aa15.41■□□□□ 0.06
SNX27-202ENST00000368841 SCO2A0A1W2PP80 73 aa15.41■□□□□ 0.06
SNX27-202ENST00000368841 LYNX1G3V0Z9 82 aa15.41■□□□□ 0.06
SNX27-202ENST00000368841 LYNX1P0DP58 116 aa15.41■□□□□ 0.06
SNX27-202ENST00000368841 IL6RP08887 468 aaPredicted RBP15.41■□□□□ 0.06
SNX27-202ENST00000368841 TMEM187Q14656 261 aa15.41■□□□□ 0.06
SNX27-202ENST00000368841 CASP8AP2Q9UKL3 1982 aa15.41■□□□□ 0.06
SNX27-202ENST00000368841 TRAV30A0A087WSZ9 112 aa15.41■□□□□ 0.06
SNX27-202ENST00000368841 TSPOP30536 169 aa15.41■□□□□ 0.06
SNX27-202ENST00000368841 OR10AG1Q8NH19 301 aa15.41■□□□□ 0.06
SNX27-202ENST00000368841 H2BFSP57053 126 aa15.41■□□□□ 0.06
SNX27-202ENST00000368841 FOLR2P14207 255 aa15.4■□□□□ 0.06
SNX27-202ENST00000368841 FAM209AQ5JX71 171 aa15.4■□□□□ 0.06
SNX27-202ENST00000368841 TMEM54Q969K7 222 aa15.4■□□□□ 0.06
SNX27-202ENST00000368841 KCNS1Q96KK3 526 aa15.4■□□□□ 0.06
SNX27-202ENST00000368841 SFXN3Q9BWM7 321 aa15.4■□□□□ 0.06
SNX27-202ENST00000368841 MRPL16Q9NX20 251 aaKnown RBP15.4■□□□□ 0.06
SNX27-202ENST00000368841 JPT1Q9UK76 154 aa15.4■□□□□ 0.06
SNX27-202ENST00000368841 GCHFRP30047 84 aa15.4■□□□□ 0.06
SNX27-202ENST00000368841 LTBRP36941 435 aa15.4■□□□□ 0.06
SNX27-202ENST00000368841 LY6DQ14210 128 aa15.4■□□□□ 0.06
SNX27-202ENST00000368841 TEX45Q8NA69 505 aa15.4■□□□□ 0.06
SNX27-202ENST00000368841 TMEM106BQ9NUM4 274 aa15.4■□□□□ 0.06
SNX27-202ENST00000368841 APOBEC3AP31941 199 aaPredicted RBP15.4■□□□□ 0.06
SNX27-202ENST00000368841 UNQ9370/PRO34162Q6UXP9 181 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms