RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 RAB25P57735 213 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 SUPT4H1P63272 117 aaKnown RBP10.97□□□□□ -0.65
TPM3-211ENST00000368531 DHODHQ02127 395 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 PPP1R1AQ13522 171 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 PRSS8Q16651 343 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 MRGPRG-AS1Q2M3A8 158 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 TMEM128Q5BJH2 165 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 C12orf54Q6X4T0 127 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 CENPVQ7Z7K6 275 aaPredicted RBP10.97□□□□□ -0.65
TPM3-211ENST00000368531 SLC25A42Q86VD7 318 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 ZNF695Q8IW36 515 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 FOXRED2Q8IWF2 684 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 PUSL1Q8N0Z8 303 aaKnown RBP10.97□□□□□ -0.65
TPM3-211ENST00000368531 RNASE11Q8TAA1 199 aaKnown RBP10.97□□□□□ -0.65
TPM3-211ENST00000368531 GRPEL2Q8TAA5 225 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 VSTM2AQ8TAG5 236 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 CASTOR1Q8WTX7 329 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 TMEM222Q9H0R3 208 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 FAM212BQ9NTI7 297 aaPredicted RBP10.97□□□□□ -0.65
TPM3-211ENST00000368531 NUDT15Q9NV35 164 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 NSG2Q9Y328 171 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 WSB1Q9Y6I7 421 aa10.97□□□□□ -0.65
TPM3-211ENST00000368531 A0A1B0GUS0 222 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 UPK2O00526 184 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 ACTL6BO94805 426 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 OPN1MWP04001 364 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 H2AFB2P0C5Z0 115 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 APELAP0DMC3 54 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 OPN1MW2P0DN77 364 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 OPN1MW3P0DN78 364 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 MYOD1P15172 320 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 AKR1C2P52895 323 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 NDPQ00604 133 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 TMEM187Q14656 261 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 POU2AF1Q16633 256 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 IZUMO4Q1ZYL8 232 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 C10orf55Q5SWW7 151 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 TMEM268Q5VZI3 342 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 HIST2H2BDQ6DRA6 164 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 ZNF562Q6V9R5 426 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 H2BFWTQ7Z2G1 175 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 NRARPQ7Z6K4 114 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 ZNF329Q86UD4 541 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 MMD2Q8IY49 270 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 KLHDC1Q8N7A1 406 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 LHFPL5Q8TAF8 219 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 TMEM167AQ8TBQ9 72 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 ARPC1AQ92747 370 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 SEC22AQ96IW7 307 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 FBXO7Q9Y3I1 522 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 MMP24Q9Y5R2 645 aa10.96□□□□□ -0.65
TPM3-211ENST00000368531 TET2Q6N021 2002 aaPredicted RBP10.96□□□□□ -0.66
TPM3-211ENST00000368531 NF1P21359 2839 aa10.95□□□□□ -0.66
TPM3-211ENST00000368531 G3V318 75 aa10.95□□□□□ -0.66
TPM3-211ENST00000368531 AP4M1O00189 453 aa10.95□□□□□ -0.66
TPM3-211ENST00000368531 CREBL2O60519 120 aaPredicted RBP10.95□□□□□ -0.66
TPM3-211ENST00000368531 B3GALNT1O75752 331 aa10.95□□□□□ -0.66
TPM3-211ENST00000368531 SNAPC5O75971 98 aa10.95□□□□□ -0.66
TPM3-211ENST00000368531 SFT2D2O95562 160 aa10.95□□□□□ -0.66
TPM3-211ENST00000368531 OR9G9P0C7N8 305 aa10.95□□□□□ -0.66
TPM3-211ENST00000368531 ANXA3P12429 323 aa10.95□□□□□ -0.66
TPM3-211ENST00000368531 PROK1P58294 105 aa10.95□□□□□ -0.66
TPM3-211ENST00000368531 SSBP2P81877 361 aaPredicted RBP10.95□□□□□ -0.66
TPM3-211ENST00000368531 SRSF4Q08170 494 aaKnown RBP10.95□□□□□ -0.66
TPM3-211ENST00000368531 ECSCRQ19T08 205 aa10.95□□□□□ -0.66
TPM3-211ENST00000368531 C4orf46Q504U0 113 aa10.95□□□□□ -0.66
TPM3-211ENST00000368531 C10orf99Q6UWK7 81 aa10.95□□□□□ -0.66
TPM3-211ENST00000368531 SELENOHQ8IZQ5 122 aaKnown RBP10.95□□□□□ -0.66
TPM3-211ENST00000368531 STPG2Q8N412 459 aa10.95□□□□□ -0.66
TPM3-211ENST00000368531 C11orf44Q8N8P7 122 aa10.95□□□□□ -0.66
TPM3-211ENST00000368531 GALNT14Q96FL9 552 aa10.95□□□□□ -0.66
TPM3-211ENST00000368531 PHB2Q99623 299 aa10.95□□□□□ -0.66
TPM3-211ENST00000368531 BET1LQ9NYM9 111 aa10.95□□□□□ -0.66
TPM3-211ENST00000368531 MSGN1A6NI15 193 aa10.94□□□□□ -0.66
TPM3-211ENST00000368531 CDS2O95674 445 aa10.94□□□□□ -0.66
TPM3-211ENST00000368531 IGKV1-5P01602 117 aa10.94□□□□□ -0.66
TPM3-211ENST00000368531 HLA-AP01891 365 aaKnown RBP10.94□□□□□ -0.66
TPM3-211ENST00000368531 OR4E1P0C645 316 aa10.94□□□□□ -0.66
TPM3-211ENST00000368531 EGR2P11161 476 aaPredicted RBP10.94□□□□□ -0.66
TPM3-211ENST00000368531 VDAC1P21796 283 aa10.94□□□□□ -0.66
TPM3-211ENST00000368531 OR2B8PP59922 312 aa10.94□□□□□ -0.66
TPM3-211ENST00000368531 RPL8P62917 257 aaKnown RBP10.94□□□□□ -0.66
TPM3-211ENST00000368531 UNQ5815/PRO19632Q6UWF5 114 aa10.94□□□□□ -0.66
TPM3-211ENST00000368531 C3orf56Q8N813 242 aa10.94□□□□□ -0.66
TPM3-211ENST00000368531 OR5AU1Q8NGC0 362 aa10.94□□□□□ -0.66
TPM3-211ENST00000368531 OR52B4Q8NGK2 314 aa10.94□□□□□ -0.66
TPM3-211ENST00000368531 OR4A5Q8NH83 315 aa10.94□□□□□ -0.66
TPM3-211ENST00000368531 RBPMSQ93062 196 aaKnown RBP10.94□□□□□ -0.66
TPM3-211ENST00000368531 RRNAD1Q96FB5 475 aaKnown RBP10.94□□□□□ -0.66
TPM3-211ENST00000368531 FYTTD1Q96QD9 318 aaKnown RBP10.94□□□□□ -0.66
TPM3-211ENST00000368531 NUBP2Q9Y5Y2 271 aa10.94□□□□□ -0.66
TPM3-211ENST00000368531 TRAV41A0A0B4J266 112 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 A0A0G2JRQ6 117 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 C9orf170A2RU37 121 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 PSMB11A5LHX3 300 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 RBMXL2O75526 392 aaKnown RBP10.93□□□□□ -0.66
TPM3-211ENST00000368531 ATG12O94817 140 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 SPNP16150 400 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 HLA-GP17693 338 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 COMPP49747 757 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms