RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 WDR31Q8NA23 367 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 SMIM8Q96KF7 97 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 RARRES2Q99969 163 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 FRMPD3Q5JV73 1810 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 TRAV24A0A0B4J272 114 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 IGHV3-35A0A0C4DH35 117 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 B4DEV8 164 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 F5H697 171 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 IL18BPO95998 194 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 PF4V1P10720 104 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 C1QTNF12Q5T7M4 302 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 LRP11Q86VZ4 500 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 MDS2Q8NDY4 140 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 TMEM208Q9BTX3 173 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 PLSCR2Q9NRY7 297 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 DOCK10Q96BY6 2186 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 LYNX1G3V0Z9 82 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 ORM1P02763 201 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 LYNX1P0DP58 116 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 B3GALT5-AS1P59052 145 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 PRSS3P2Q8NHM4 247 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 ANAPC16Q96DE5 110 aa10.37□□□□□ -0.75
PTPRK-203ENST00000368207 SNRNP40Q96DI7 357 aaKnown RBP10.37□□□□□ -0.75
PTPRK-203ENST00000368207 NOTCH2Q04721 2471 aa10.36□□□□□ -0.75
PTPRK-203ENST00000368207 CDK2AP1O14519 115 aa10.36□□□□□ -0.75
PTPRK-203ENST00000368207 FAM74A3Q4VXF1 159 aa10.36□□□□□ -0.75
PTPRK-203ENST00000368207 PEAR1Q5VY43 1037 aaPredicted RBP10.36□□□□□ -0.75
PTPRK-203ENST00000368207 FUT9Q9Y231 359 aa10.36□□□□□ -0.75
PTPRK-203ENST00000368207 IGKV1-27A0A075B6S5 117 aa10.36□□□□□ -0.75
PTPRK-203ENST00000368207 ZNF253O75346 499 aa10.36□□□□□ -0.75
PTPRK-203ENST00000368207 SELENOTP62341 195 aa10.36□□□□□ -0.75
PTPRK-203ENST00000368207 SLC35B1P78383 322 aa10.36□□□□□ -0.75
PTPRK-203ENST00000368207 LY6EQ16553 131 aa10.36□□□□□ -0.75
PTPRK-203ENST00000368207 C11orf42Q8N5U0 333 aa10.36□□□□□ -0.75
PTPRK-203ENST00000368207 OR4A5Q8NH83 315 aa10.36□□□□□ -0.75
PTPRK-203ENST00000368207 KBTBD11-OT1A0A1B0GTJ5 212 aa10.36□□□□□ -0.75
PTPRK-203ENST00000368207 ZNF735P0CB33 412 aa10.36□□□□□ -0.75
PTPRK-203ENST00000368207 HTN1P15515 57 aa10.36□□□□□ -0.75
PTPRK-203ENST00000368207 CRISP2P16562 243 aa10.36□□□□□ -0.75
PTPRK-203ENST00000368207 RND3P61587 244 aa10.36□□□□□ -0.75
PTPRK-203ENST00000368207 C5orf17Q8NAS9 161 aa10.36□□□□□ -0.75
PTPRK-203ENST00000368207 NPIPB3Q92617 1050 aa10.36□□□□□ -0.75
PTPRK-203ENST00000368207 MS4A10Q96PG2 267 aa10.36□□□□□ -0.75
PTPRK-203ENST00000368207 ZNF430Q9H8G1 570 aaPredicted RBP10.36□□□□□ -0.75
PTPRK-203ENST00000368207 PNRC2Q9NPJ4 139 aaKnown RBP10.36□□□□□ -0.75
PTPRK-203ENST00000368207 TRBV23-1A0A0A0MS06 115 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 TRAV14DV4A0A0A6YYC5 116 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 FAM74A7A6NL05 159 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 H3BTX0 84 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 AP4M1O00189 453 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 AMTP48728 403 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 SGMS2Q8NHU3 365 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 ZNF524Q96C55 264 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 RBM14Q96PK6 669 aaKnown RBP10.35□□□□□ -0.75
PTPRK-203ENST00000368207 RPRMQ9NS64 109 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 MFSD2BA6NFX1 497 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 IER3P46695 156 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 RNFT1Q5M7Z0 435 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 FAM122AQ96E09 287 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 UFC1Q9Y3C8 167 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 TRBV6-7A0A0A0MS04 114 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 RNF222A6NCQ9 220 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 F8VVB4 439 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 F8VWA3 439 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 DANCRP0C864 163 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 CDKN1AP38936 164 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 LOXL3P58215 753 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 HSPB1P04792 205 aaKnown RBP10.35□□□□□ -0.75
PTPRK-203ENST00000368207 ZGRF1Q86YA3 2104 aa10.35□□□□□ -0.75
PTPRK-203ENST00000368207 CORTO00230 105 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 LCN2P80188 198 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 WDR73Q6P4I2 378 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 PARD6AQ9NPB6 346 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 CA2P00918 260 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 LY6G6FQ5SQ64 297 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 SLC16A13Q7RTY0 426 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 PRNTQ86SH4 94 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 RTN4RL2Q86UN3 420 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 OR2D3Q8NGH3 330 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 SMDT1Q9H4I9 107 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 SNURFLB1AK76 121 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 PPOXP50336 477 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 PIMREGQ9BSJ6 248 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 TMPRSS5Q9H3S3 457 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 GBF1Q92538 1859 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 PGPA6NDG6 321 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 EGR1P18146 543 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 PQLC2Q6ZP29 291 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 FBXL15Q9H469 300 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 GTF3C1Q12789 2109 aa10.34□□□□□ -0.75
PTPRK-203ENST00000368207 SELLP14151 372 aa10.33□□□□□ -0.76
PTPRK-203ENST00000368207 HIST1H1BP16401 226 aaKnown RBP10.33□□□□□ -0.76
PTPRK-203ENST00000368207 ZNF137PP52743 207 aa10.33□□□□□ -0.76
PTPRK-203ENST00000368207 TMEM30BQ3MIR4 351 aa10.33□□□□□ -0.76
PTPRK-203ENST00000368207 OR1L6Q8NGR2 347 aa10.33□□□□□ -0.76
PTPRK-203ENST00000368207 RNASE6Q93091 150 aaKnown RBP10.33□□□□□ -0.76
PTPRK-203ENST00000368207 SGK494Q96LW2 274 aa10.33□□□□□ -0.76
PTPRK-203ENST00000368207 ARL14EPLP0DKL9 152 aa10.33□□□□□ -0.76
PTPRK-203ENST00000368207 FXYD3Q14802 87 aa10.33□□□□□ -0.76
PTPRK-203ENST00000368207 C5orf24Q7Z6I8 188 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms