RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 MS4A5Q9H3V2 200 aa11.81□□□□□ -0.52
CD48-201ENST00000368045 NPVFQ9HCQ7 196 aa11.81□□□□□ -0.52
CD48-201ENST00000368045 LSM4Q9Y4Z0 139 aaKnown RBP11.81□□□□□ -0.52
CD48-201ENST00000368045 PXMP4Q9Y6I8 212 aa11.81□□□□□ -0.52
CD48-201ENST00000368045 A0A1W2PPQ1 181 aa11.8□□□□□ -0.52
CD48-201ENST00000368045 FTH1P19P0C7X4 201 aa11.8□□□□□ -0.52
CD48-201ENST00000368045 PLA2G5P39877 138 aa11.8□□□□□ -0.52
CD48-201ENST00000368045 DEFA6Q01524 100 aa11.8□□□□□ -0.52
CD48-201ENST00000368045 SRSF6Q13247 344 aaKnown RBP11.8□□□□□ -0.52
CD48-201ENST00000368045 MSMPQ1L6U9 139 aa11.8□□□□□ -0.52
CD48-201ENST00000368045 GCSAMLQ5JQS6 135 aa11.8□□□□□ -0.52
CD48-201ENST00000368045 CST9LP1Q5W188 147 aa11.8□□□□□ -0.52
CD48-201ENST00000368045 MOGAT3Q86VF5 341 aa11.8□□□□□ -0.52
CD48-201ENST00000368045 USF3Q68DE3 2245 aa11.8□□□□□ -0.52
CD48-201ENST00000368045 CHD3Q12873 2000 aaKnown RBP11.8□□□□□ -0.52
CD48-201ENST00000368045 IGLV3-9A0A075B6K5 115 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 TRBV23-1A0A0A0MS06 115 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 KBTBD11-OT1A0A1B0GTJ5 212 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 CRYAAP02489 173 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 ATP5G3P48201 142 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 ZNF83P51522 516 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 ZNF134P52741 427 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 FOXL1Q12952 345 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 RAB31Q13636 194 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 JOSD1Q15040 202 aaPredicted RBP11.79□□□□□ -0.52
CD48-201ENST00000368045 POU2AF1Q16633 256 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 CDPF1Q6NVV7 123 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 SEM1Q6ZVN7 128 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 LRP11Q86VZ4 500 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 ZADH2Q8N4Q0 377 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 SDSLQ96GA7 329 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 SFXN3Q9BWM7 321 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 TMEM14BQ9NUH8 114 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 IGHV3OR15-7A0A075B7D8 119 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 NDUFB4O95168 129 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 MT-CO2P00403 227 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 AMBPP02760 352 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 ARL14EPLP0DKL9 152 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 WT1P19544 449 aaPredicted RBP11.79□□□□□ -0.52
CD48-201ENST00000368045 HSPE1P61604 102 aaKnown RBP11.79□□□□□ -0.52
CD48-201ENST00000368045 C17orf58Q2M2W7 97 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 C9orf152Q5JTZ5 239 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 TMEM144Q7Z5S9 345 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 ZNRF1Q8ND25 227 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 CORO2AQ92828 525 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 ENY2Q9NPA8 101 aa11.79□□□□□ -0.52
CD48-201ENST00000368045 GTF3C1Q12789 2109 aa11.78□□□□□ -0.52
CD48-201ENST00000368045 TRGV10A0A0A0MS01 117 aa11.78□□□□□ -0.52
CD48-201ENST00000368045 TSTD3H0UI37 97 aa11.78□□□□□ -0.52
CD48-201ENST00000368045 M0R1B8 84 aa11.78□□□□□ -0.52
CD48-201ENST00000368045 DEFA4P12838 97 aa11.78□□□□□ -0.52
CD48-201ENST00000368045 NPY1RP25929 384 aa11.78□□□□□ -0.52
CD48-201ENST00000368045 RPL29P47914 159 aaKnown RBP11.78□□□□□ -0.52
CD48-201ENST00000368045 NUBP1P53384 320 aa11.78□□□□□ -0.52
CD48-201ENST00000368045 UBE2G2P60604 165 aa11.78□□□□□ -0.52
CD48-201ENST00000368045 RHOBP62745 196 aa11.78□□□□□ -0.52
CD48-201ENST00000368045 GAMTQ14353 236 aa11.78□□□□□ -0.52
CD48-201ENST00000368045 DEFB109BQ30KR1 87 aa11.78□□□□□ -0.52
CD48-201ENST00000368045 CT45A1Q5HYN5 189 aa11.78□□□□□ -0.52
CD48-201ENST00000368045 MIC13Q5XKP0 118 aa11.78□□□□□ -0.52
CD48-201ENST00000368045 TEPPQ6URK8 271 aa11.78□□□□□ -0.52
CD48-201ENST00000368045 CT45A3Q8NHU0 189 aa11.78□□□□□ -0.52
CD48-201ENST00000368045 PLPPR2Q96GM1 343 aa11.78□□□□□ -0.52
CD48-201ENST00000368045 FAM234AQ9H0X4 552 aa11.78□□□□□ -0.52
CD48-201ENST00000368045 LINC00574Q9H8X3 128 aa11.78□□□□□ -0.52
CD48-201ENST00000368045 PATZ1Q9HBE1 687 aaKnown RBP11.78□□□□□ -0.52
CD48-201ENST00000368045 RNF7Q9UBF6 113 aa11.78□□□□□ -0.52
CD48-201ENST00000368045 ARL2-SNX15V9GYD0 113 aa11.78□□□□□ -0.52
CD48-201ENST00000368045 TRAV3A0A0B4J244 114 aa11.77□□□□□ -0.52
CD48-201ENST00000368045 SLC31A2O15432 143 aa11.77□□□□□ -0.52
CD48-201ENST00000368045 IL6RP08887 468 aaPredicted RBP11.77□□□□□ -0.52
CD48-201ENST00000368045 CCKARP32238 428 aa11.77□□□□□ -0.52
CD48-201ENST00000368045 CHRNA7P36544 502 aa11.77□□□□□ -0.52
CD48-201ENST00000368045 ATP5IP56385 69 aaPredicted RBP11.77□□□□□ -0.52
CD48-201ENST00000368045 SELENOVP59797 346 aa11.77□□□□□ -0.52
CD48-201ENST00000368045 VKORC1L1Q8N0U8 176 aa11.77□□□□□ -0.52
CD48-201ENST00000368045 ABHD12Q8N2K0 398 aa11.77□□□□□ -0.52
CD48-201ENST00000368045 DEFB124Q8NES8 71 aa11.77□□□□□ -0.52
CD48-201ENST00000368045 SLC24A4Q8NFF2 622 aa11.77□□□□□ -0.52
CD48-201ENST00000368045 ITLN1Q8WWA0 313 aa11.77□□□□□ -0.52
CD48-201ENST00000368045 RHOVQ96L33 236 aa11.77□□□□□ -0.52
CD48-201ENST00000368045 PRNDQ9UKY0 176 aa11.77□□□□□ -0.52
CD48-201ENST00000368045 NCOR1O75376 2440 aa11.77□□□□□ -0.52
CD48-201ENST00000368045 PTPRBP23467 1997 aa11.77□□□□□ -0.53
CD48-201ENST00000368045 DMDP11532 3685 aa11.77□□□□□ -0.53
CD48-201ENST00000368045 TRAV9-1A0A075B6T8 112 aa11.77□□□□□ -0.53
CD48-201ENST00000368045 SAA2-SAA4A0A096LPE2 208 aa11.77□□□□□ -0.53
CD48-201ENST00000368045 MDFIC2A0A1B0GVS7 189 aa11.77□□□□□ -0.53
CD48-201ENST00000368045 SPRY3O43610 288 aa11.77□□□□□ -0.53
CD48-201ENST00000368045 GCGP01275 180 aa11.77□□□□□ -0.53
CD48-201ENST00000368045 SAA2P0DJI9 122 aaPredicted RBP11.77□□□□□ -0.53
CD48-201ENST00000368045 IL3RAP26951 378 aa11.77□□□□□ -0.53
CD48-201ENST00000368045 MRPS11P82912 194 aaKnown RBP11.77□□□□□ -0.53
CD48-201ENST00000368045 OR4A47Q6IF82 309 aa11.77□□□□□ -0.53
CD48-201ENST00000368045 IGFL3Q6UXB1 125 aa11.77□□□□□ -0.53
CD48-201ENST00000368045 C11orf52Q96A22 123 aa11.77□□□□□ -0.53
CD48-201ENST00000368045 SFRP2Q96HF1 295 aa11.77□□□□□ -0.53
CD48-201ENST00000368045 FUT9Q9Y231 359 aa11.77□□□□□ -0.53
CD48-201ENST00000368045 ZNF257Q9Y2Q1 563 aa11.77□□□□□ -0.53
CD48-201ENST00000368045 LY96Q9Y6Y9 160 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms