RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 IGKV1-33P01594 117 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 GZMHP20718 246 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 HOXC12P31275 282 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 IDH3GP51553 393 aaPredicted RBP9.6□□□□□ -0.87
USF1-201ENST00000368019 CNN1P51911 297 aaKnown RBP9.6□□□□□ -0.87
USF1-201ENST00000368019 NUTF2P61970 127 aaKnown RBP9.6□□□□□ -0.87
USF1-201ENST00000368019 EIF4EBP1Q13541 118 aaPredicted RBP9.6□□□□□ -0.87
USF1-201ENST00000368019 ZNF146Q15072 292 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 GABRA6Q16445 453 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 DEFB113Q30KQ7 82 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 AARDQ4LEZ3 155 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 SPANXN5Q5MJ07 72 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 WIPI1Q5MNZ9 446 aaPredicted RBP9.6□□□□□ -0.87
USF1-201ENST00000368019 BEND4Q6ZU67 534 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 KRTAP1-3Q8IUG1 177 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 GBGT1Q8N5D6 347 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 ZNF645Q8N7E2 425 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 OR10P1Q8NGE3 313 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 OR10G9Q8NGN4 311 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 OR10G7Q8NGN6 311 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 LINC01560Q8TB33 94 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 NANOS1Q8WY41 292 aaKnown RBP9.6□□□□□ -0.87
USF1-201ENST00000368019 HS3ST6Q96QI5 342 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 NEU1Q99519 415 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 RTL8AQ9BWD3 113 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 PRO1933Q9H354 126 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 KCNIP2Q9NS61 270 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 IL36RNQ9UBH0 155 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 JMJD1CQ15652 2540 aa9.6□□□□□ -0.87
USF1-201ENST00000368019 A0A1W2PPR1 153 aa9.59□□□□□ -0.87
USF1-201ENST00000368019 C5orf49A4QMS7 147 aa9.59□□□□□ -0.87
USF1-201ENST00000368019 LRRC30A6NM36 301 aa9.59□□□□□ -0.87
USF1-201ENST00000368019 M0QZK8 103 aa9.59□□□□□ -0.87
USF1-201ENST00000368019 MPDU1O75352 247 aa9.59□□□□□ -0.87
USF1-201ENST00000368019 RAB4AP20338 218 aa9.59□□□□□ -0.87
USF1-201ENST00000368019 ELLP55199 621 aaPredicted RBP9.59□□□□□ -0.87
USF1-201ENST00000368019 UBE2NP61088 152 aaKnown RBP9.59□□□□□ -0.87
USF1-201ENST00000368019 RPL15P61313 204 aaKnown RBP9.59□□□□□ -0.87
USF1-201ENST00000368019 PPP1CBP62140 327 aa9.59□□□□□ -0.87
USF1-201ENST00000368019 ZNF124Q15973 351 aa9.59□□□□□ -0.87
USF1-201ENST00000368019 FIP1L1Q6UN15 594 aaKnown RBP9.59□□□□□ -0.87
USF1-201ENST00000368019 FGFRL1Q8N441 504 aa9.59□□□□□ -0.87
USF1-201ENST00000368019 DRAM1Q8N682 238 aa9.59□□□□□ -0.87
USF1-201ENST00000368019 ZNF709Q8N972 641 aa9.59□□□□□ -0.87
USF1-201ENST00000368019 C9orf106Q8NAJ2 232 aa9.59□□□□□ -0.87
USF1-201ENST00000368019 WFDC11Q8NEX6 87 aa9.59□□□□□ -0.87
USF1-201ENST00000368019 ABHD3Q8WU67 409 aa9.59□□□□□ -0.87
USF1-201ENST00000368019 RDH5Q92781 318 aa9.59□□□□□ -0.87
USF1-201ENST00000368019 TRIB1Q96RU8 372 aa9.59□□□□□ -0.87
USF1-201ENST00000368019 GPHA2Q96T91 129 aa9.59□□□□□ -0.87
USF1-201ENST00000368019 GP6Q9HCN6 339 aa9.59□□□□□ -0.87
USF1-201ENST00000368019 PPP1R14DQ9NXH3 145 aa9.59□□□□□ -0.87
USF1-201ENST00000368019 OR1A1Q9P1Q5 309 aa9.59□□□□□ -0.87
USF1-201ENST00000368019 DSCAMO60469 2012 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 ROS1P08922 2347 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 TMEM210A6NLX4 147 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 SLC33A1O00400 549 aaPredicted RBP9.58□□□□□ -0.88
USF1-201ENST00000368019 ESDP10768 282 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 SELLP14151 372 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 NDUFB7P17568 137 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 LHX2P50458 406 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 CLDN18P56856 261 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 ERVFC1-1P60608 527 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 YPEL3P61236 119 aaPredicted RBP9.58□□□□□ -0.88
USF1-201ENST00000368019 ERVS71-1P61550 626 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 FOXF2Q12947 444 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 FFAR4Q5NUL3 377 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 C1orf194Q5T5A4 169 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 NUFIP2Q7Z417 695 aaKnown RBP9.58□□□□□ -0.88
USF1-201ENST00000368019 OR4F5Q8NH21 305 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 RPUSD4Q96CM3 377 aaKnown RBP9.58□□□□□ -0.88
USF1-201ENST00000368019 MISP3Q96FF7 219 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 OR4F4Q96R69 305 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 PCGF1Q9BSM1 259 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 TMEM204Q9BSN7 226 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 TRAPPC2LQ9UL33 140 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 KCNS2Q9ULS6 477 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 PXMP4Q9Y6I8 212 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 LY96Q9Y6Y9 160 aa9.58□□□□□ -0.88
USF1-201ENST00000368019 RAI1Q7Z5J4 1906 aaPredicted RBP9.57□□□□□ -0.88
USF1-201ENST00000368019 A0A1W2PPQ1 181 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 TMEM30CPA0ZSE6 113 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 HS3ST1O14792 307 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 SH2D1BO14796 132 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 OR2H2O95918 312 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 OR10J1P30954 320 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 CDC34P49427 236 aaPredicted RBP9.57□□□□□ -0.88
USF1-201ENST00000368019 SELENOTP62341 195 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 RANP62826 216 aaKnown RBP9.57□□□□□ -0.88
USF1-201ENST00000368019 PAFAH1B2P68402 229 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 RPP30P78346 268 aaKnown RBP9.57□□□□□ -0.88
USF1-201ENST00000368019 PAX5Q02548 391 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 SLC35E4Q6ICL7 350 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 C5orf24Q7Z6I8 188 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 CXorf67Q86X51 503 aaPredicted RBP9.57□□□□□ -0.88
USF1-201ENST00000368019 APH1AQ96BI3 265 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 R3HDM4Q96D70 268 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 SMR3AQ99954 134 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 NPCDR1Q9BY65 106 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 PRRG4Q9BZD6 226 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms