RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 C7orf71A4D174 169 aa7.65□□□□□ -1.18
SYNE1-209ENST00000367257 HBBP68871 147 aa7.65□□□□□ -1.18
SYNE1-209ENST00000367257 GAGE2BQ13066 116 aa7.65□□□□□ -1.18
SYNE1-209ENST00000367257 C2orf68Q2NKX9 166 aa7.65□□□□□ -1.18
SYNE1-209ENST00000367257 GAGE2EQ4V326 116 aa7.65□□□□□ -1.18
SYNE1-209ENST00000367257 GFI1BQ5VTD9 330 aa7.65□□□□□ -1.18
SYNE1-209ENST00000367257 DEFB123Q8N688 67 aa7.65□□□□□ -1.18
SYNE1-209ENST00000367257 GAGE2DQ9UEU5 116 aa7.65□□□□□ -1.18
SYNE1-209ENST00000367257 COX11Q9Y6N1 276 aa7.65□□□□□ -1.18
SYNE1-209ENST00000367257 IL4P05112 153 aa7.65□□□□□ -1.18
SYNE1-209ENST00000367257 PSG4Q00888 419 aa7.65□□□□□ -1.18
SYNE1-209ENST00000367257 CYP2G1PQ6ZSU1 146 aa7.65□□□□□ -1.18
SYNE1-209ENST00000367257 OR9G1Q8NH87 305 aa7.65□□□□□ -1.18
SYNE1-209ENST00000367257 TMEM171Q8WVE6 324 aa7.65□□□□□ -1.18
SYNE1-209ENST00000367257 ZNF501Q96CX3 271 aaPredicted RBP7.65□□□□□ -1.18
SYNE1-209ENST00000367257 ZNF385AQ96PM9 386 aaKnown RBP7.65□□□□□ -1.18
SYNE1-209ENST00000367257 PRR13Q9NZ81 148 aa7.65□□□□□ -1.18
SYNE1-209ENST00000367257 A0A1W2PPE3 182 aa7.65□□□□□ -1.19
SYNE1-209ENST00000367257 LINC01565O15544 149 aa7.65□□□□□ -1.19
SYNE1-209ENST00000367257 ADRA2AP08913 450 aa7.65□□□□□ -1.19
SYNE1-209ENST00000367257 CCL3P10147 92 aa7.65□□□□□ -1.19
SYNE1-209ENST00000367257 MPZP25189 248 aa7.65□□□□□ -1.19
SYNE1-209ENST00000367257 MAGEA5P43359 124 aa7.65□□□□□ -1.19
SYNE1-209ENST00000367257 GPR6P46095 362 aaPredicted RBP7.65□□□□□ -1.19
SYNE1-209ENST00000367257 FAM106AQ4KMX7 169 aa7.65□□□□□ -1.19
SYNE1-209ENST00000367257 OR4C13Q8NGP0 309 aa7.65□□□□□ -1.19
SYNE1-209ENST00000367257 WDYHV1Q96HA8 205 aa7.65□□□□□ -1.19
SYNE1-209ENST00000367257 PRELID3AQ96N28 172 aa7.65□□□□□ -1.19
SYNE1-209ENST00000367257 GPR82Q96P67 336 aa7.65□□□□□ -1.19
SYNE1-209ENST00000367257 KIR2DL4Q99706 377 aa7.65□□□□□ -1.19
SYNE1-209ENST00000367257 TTTY12Q9BZ98 90 aa7.65□□□□□ -1.19
SYNE1-209ENST00000367257 PLA2G2FQ9BZM2 168 aa7.65□□□□□ -1.19
SYNE1-209ENST00000367257 TNFRSF19Q9NS68 423 aa7.65□□□□□ -1.19
SYNE1-209ENST00000367257 UBE2L6O14933 153 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 PRKNO60260 465 aaPredicted RBP7.64□□□□□ -1.19
SYNE1-209ENST00000367257 OR2H2O95918 312 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 CEACAM1P13688 526 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 IGFBP6P24592 240 aaPredicted RBP7.64□□□□□ -1.19
SYNE1-209ENST00000367257 C10orf111Q8N326 155 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 OSR1Q8TAX0 266 aaPredicted RBP7.64□□□□□ -1.19
SYNE1-209ENST00000367257 TMEM54Q969K7 222 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 GPR146Q96CH1 333 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 RAX2Q96IS3 184 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 SSBP4Q9BWG4 385 aaPredicted RBP7.64□□□□□ -1.19
SYNE1-209ENST00000367257 GPR183P32249 361 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 SEC11AP67812 179 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 SPINK9Q5DT21 86 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 FGFRL1Q8N441 504 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 C1orf162Q8NEQ5 155 aaPredicted RBP7.64□□□□□ -1.19
SYNE1-209ENST00000367257 CACNG8Q8WXS5 425 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 C1QTNF9BB2RNN3 333 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 ZNF324O75467 553 aaPredicted RBP7.64□□□□□ -1.19
SYNE1-209ENST00000367257 SMIM10L1P0DMW3 83 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 ANOS1P23352 680 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 OTX1P32242 354 aaPredicted RBP7.64□□□□□ -1.19
SYNE1-209ENST00000367257 WNT5AP41221 380 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 ZXDAP98168 799 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 ANKRD39Q53RE8 183 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 OR1K1Q8NGR3 316 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 SMIM10Q96HG1 83 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 NEU1Q99519 415 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 HIST1H4GQ99525 98 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 ODAMA1E959 279 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 FAM90A9PA6NNJ1 464 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 TYMSP04818 313 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 SRIP30626 198 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 CSRP3P50461 194 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 BOD1L2Q8IYS8 172 aa7.64□□□□□ -1.19
SYNE1-209ENST00000367257 SCARF2Q96GP6 870 aaPredicted RBP7.64□□□□□ -1.19
SYNE1-209ENST00000367257 IGHV1-45A0A0A0MS14 117 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 FGF16O43320 207 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 C1QL3Q5VWW1 255 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 IMMP2LQ96T52 175 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 SEPSECSQ9HD40 501 aaKnown RBP7.63□□□□□ -1.19
SYNE1-209ENST00000367257 AURKAIP1Q9NWT8 199 aaPredicted RBP7.63□□□□□ -1.19
SYNE1-209ENST00000367257 CALYQ9NYX4 217 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 A0A0G2JMM0 328 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 A0A1W2PPB8 328 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 FAM90A27PA6NNH2 459 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 KIR3DP1A8MWS1 328 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 PEBP1P30086 187 aaKnown RBP7.63□□□□□ -1.19
SYNE1-209ENST00000367257 ZFP36L2P47974 494 aaKnown RBP7.63□□□□□ -1.19
SYNE1-209ENST00000367257 SRSF3P84103 164 aaKnown RBP7.63□□□□□ -1.19
SYNE1-209ENST00000367257 SRSF4Q08170 494 aaKnown RBP7.63□□□□□ -1.19
SYNE1-209ENST00000367257 LAIR2Q6ISS4 152 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 FMC1Q96HJ9 113 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 C16orf92Q96LL3 132 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 TMEM140Q9NV12 185 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 IL36BQ9NZH7 164 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 TRAV9-2A0A087WT02 112 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 TBX6O95947 436 aaPredicted RBP7.63□□□□□ -1.19
SYNE1-209ENST00000367257 SRSF5Q13243 272 aaKnown RBP7.63□□□□□ -1.19
SYNE1-209ENST00000367257 LHFPL4Q7Z7J7 247 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 EEF1AKMT3Q96AZ1 226 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 DLL3Q9NYJ7 618 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 KLHDC2Q9Y2U9 406 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 MRPS18CQ9Y3D5 142 aaKnown RBP7.63□□□□□ -1.19
SYNE1-209ENST00000367257 PGPA6NDG6 321 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 OR11H12B2RN74 326 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 APOMO95445 188 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms