RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 TMEM101Q96IK0 257 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 AHDC1Q5TGY3 1603 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 A0A087X0K7 114 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 IGKV6-21A0A0C4DH24 114 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 PGPEP1LA6NFU8 196 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 S1PR2O95136 353 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 IGHV4-39P01824 125 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 B4GALNT1Q00973 533 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 DNAJB12Q9NXW2 375 aaKnown RBP9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 A0A0A6YYD5 115 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 GAGE1Q13065 139 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 COL14A1Q05707 1796 aaKnown RBP9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 PSG2P11465 335 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 CDKN1BP46527 198 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 REG1BP48304 166 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 SUMO2P61956 95 aaKnown RBP9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 POLR3KQ9Y2Y1 108 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 ADRA2AP08913 450 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 UCP1P25874 307 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 GPR6P46095 362 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 PIGYQ3MUY2 71 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 METTL26Q96S19 204 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 NPFFR1Q9GZQ6 430 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 PHLDA3Q9Y5J5 127 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 GPHA2Q96T91 129 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 IGKV3-20P01619 116 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 ATP6V0BQ99437 205 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 SRSF8Q9BRL6 282 aaKnown RBP9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 FOXB1Q99853 325 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 TCF20Q9UGU0 1960 aaKnown RBP9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 HOXC4P09017 264 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 SPRED2Q7Z698 418 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 A0A0G2JMM0 328 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 A0A1W2PPB8 328 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 KIR3DP1A8MWS1 328 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 HTN3P15516 51 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 HMGA2P52926 109 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 CXorf66Q5JRM2 361 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 DEFB124Q8NES8 71 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 C2orf16Q68DN1 1984 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 A0A1B0GU03 582 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 PF4V1P10720 104 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 TDGF1P13385 188 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 TSPOP30536 169 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 OR52E5Q8NH55 327 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 PP6455Q8WZ26 134 aa9.59□□□□□ -0.87
CDC42BPA-205ENST00000366769 SEPSECSQ9HD40 501 aaKnown RBP9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 PATE4P0C8F1 98 aa9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 H0YIG0 161 aa9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 PLPP3O14495 311 aa9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 DLX6P56179 175 aa9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 MOGAT3Q86VF5 341 aa9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 C1QTNF9BB2RNN3 333 aa9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 CKS2P33552 79 aa9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 FAM74A4Q5TZK3 123 aa9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 LCN12Q6JVE5 192 aa9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 CXXC4Q9H2H0 198 aa9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 R4GN57 208 aa9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 TMEM144Q7Z5S9 345 aa9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 RBFOX2O43251 390 aaKnown RBP eCLIP9.58□□□□□ -0.889e-6■■□□□ 11.7
CDC42BPA-205ENST00000366769 MIC13Q5XKP0 118 aa9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 MMP25Q9NPA2 562 aa9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 TRBV5-3A0A0A0MS03 114 aa9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 RNF222A6NCQ9 220 aa9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 FOXA3P55318 350 aaPredicted RBP9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 HARBI1Q96MB7 349 aa9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 TRAV8-6A0A0B4J262 113 aa9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 LIPFP07098 398 aa9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 THAP10Q9P2Z0 257 aaPredicted RBP9.58□□□□□ -0.88
CDC42BPA-205ENST00000366769 COPS9Q8WXC6 57 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 CENPWQ5EE01 88 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 CNRIP1Q96F85 164 aaPredicted RBP9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 GPR35Q9HC97 309 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 A0A087WUJ7 227 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 AQP3Q92482 292 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 LRRC61Q9BV99 259 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 TMEM189A5PLL7 270 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 IBA57Q5T440 356 aaKnown RBP9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 TMEM30AQ9NV96 361 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 OR51B2Q9Y5P1 312 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 TRAV21A0A0B4J279 112 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 EGR1P18146 543 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 TMEM211Q6ICI0 200 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 FAM71F2Q6NXP2 309 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 SPSB1Q96BD6 273 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 TRBV9A0A0B4J1U6 114 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 AGFG2O95081 481 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 SOX8P57073 446 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 WDR34Q96EX3 536 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 PLXNA4Q9HCM2 1894 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 SCAND1P57086 179 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 TMEM52BQ4KMG9 183 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 Q6ZVH6 145 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 ZFP36L2P47974 494 aaKnown RBP9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 WFDC5Q8TCV5 224 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 RNASE8Q8TDE3 154 aaKnown RBP9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 C5orf30Q96GV9 206 aa9.57□□□□□ -0.88
CDC42BPA-205ENST00000366769 ZNF32P17041 273 aa9.56□□□□□ -0.88
CDC42BPA-205ENST00000366769 GGTLC2Q14390 218 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms