RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 NCOA6Q14686 2063 aaPredicted RBP0.44□□□□□ -2.34
RNU4-48P-201ENST00000365559 ECM29Q5VYK3 1845 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 EXPH5Q8NEV8 1989 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 STRCQ7RTU9 1775 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 TMEM269A0A1B0GVZ9 245 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 C5orf49A4QMS7 147 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 MEIS3P1A6NDR6 274 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 OR51F1A6NGY5 319 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 FAM25EA8MYX2 175 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 IBA57-AS1B1ANH7 110 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 FTCDNL1E5RQL4 147 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 TRAPPC2LH3BP13 241 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 TOX3O15405 576 aaPredicted RBP0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 STX10O60499 249 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 NEMFO60524 1076 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 SCN2BO60939 215 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 ORM1P02763 201 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 IL6P05231 212 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 EVX1P49640 407 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 HIST1H4AP62805 103 aaKnown RBP0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 EBPQ15125 230 aaKnown RBP0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 PLPPR5Q32ZL2 321 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 FUNDC1Q8IVP5 155 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 GID4Q8IVV7 300 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 RPP25LQ8N5L8 163 aaKnown RBP0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 CCL13Q99616 98 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 DCUN1D5Q9BTE7 237 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 REG4Q9BYZ8 158 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 MS4A6AQ9H2W1 248 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 CD300AQ9UGN4 299 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 CFAP45Q9UL16 551 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 GLI3P10071 1580 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 RP1P56715 2156 aa0.43□□□□□ -2.34
RNU4-48P-201ENST00000365559 MYH7BA7E2Y1 1941 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 CEP192Q8TEP8 1941 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 PLXND1Q9Y4D7 1925 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 SETD5Q9C0A6 1442 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 TEX50A0A1B0GTY4 177 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 TMEM213A2RRL7 107 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 COX7A2LO14548 114 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 HPGDSO60760 199 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 NPPAP01160 153 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 OCMP0CE72 109 aaPredicted RBP0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 HIST1H1CP16403 213 aaKnown RBP0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 SLCO1A2P46721 670 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 AKR1C1Q04828 323 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 TMED1Q13445 227 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 C9orf64Q5T6V5 341 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 FAM27BQ5VT28 67 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 DNM1P34Q6PK57 102 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 DCXRQ7Z4W1 244 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 DYNAPQ8N1N2 210 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 UMODL1-AS1Q8N2C9 162 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 DNAJB3Q8WWF6 145 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 ACOT12Q8WYK0 555 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 TESCQ96BS2 214 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 ANKRD36BP1Q96IX9 119 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 DHRS9Q9BPW9 319 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 C7orf50Q9BRJ6 194 aaKnown RBP0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 SPACA1Q9HBV2 294 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 HRASLSQ9HDD0 168 aa0.42□□□□□ -2.34
RNU4-48P-201ENST00000365559 TINCRA0A1B0GVN0 87 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 LINC00854A0A1B0GVQ3 168 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 GOLGA6L10A6NI86 522 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 ATP8B1O43520 1251 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 CALUO43852 315 aaPredicted RBP0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 APOMO95445 188 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 NSA2O95478 260 aaKnown RBP0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 UGT2B7P16662 529 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 PSMB6P28072 239 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 REG1BP48304 166 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 CXCR4P61073 352 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 RPL30P62888 115 aaKnown RBP0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 SDHAF4Q5VUM1 108 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 FAM19A5Q7Z5A7 132 aaPredicted RBP0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 CD302Q8IX05 232 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 FAM19A2Q8N3H0 131 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 UBL4BQ8N7F7 174 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 OR7G1Q8NGA0 311 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 EEF1AKMT1Q8WVE0 214 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 ASB13Q8WXK3 278 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 GNPNAT1Q96EK6 184 aaPredicted RBP0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 ATP6V1G3Q96LB4 118 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 CFAP53Q96M91 514 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 UPF3BQ9BZI7 483 aaKnown RBP0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 DERL2Q9GZP9 239 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 SLC22A4Q9H015 551 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 WDR54Q9H977 334 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 SPANXB1Q9NS25 103 aaPredicted RBP0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 TIMM22Q9Y584 194 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 GMEB1Q9Y692 573 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 LHFPL6Q9Y693 200 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 KIF24Q5T7B8 1368 aa0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 TNRC6AQ8NDV7 1962 aaKnown RBP0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 TNRC6BQ9UPQ9 1833 aaKnown RBP0.41□□□□□ -2.34
RNU4-48P-201ENST00000365559 DENND4CQ5VZ89 1909 aa0.4□□□□□ -2.34
RNU4-48P-201ENST00000365559 FABP12A6NFH5 140 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 M0QX08 132 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 GEMIN2O14893 280 aaKnown RBP0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 BIRC5O15392 142 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms