RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 TIMM22Q9Y584 194 aa0.33□□□□□ -2.36
RNU4-28P-201ENST00000364739 LHFPL6Q9Y693 200 aa0.33□□□□□ -2.36
RNU4-28P-201ENST00000364739 GPR98Q8WXG9 6306 aa0.33□□□□□ -2.36
RNU4-28P-201ENST00000364739 TNRC6AQ8NDV7 1962 aaKnown RBP0.32□□□□□ -2.36
RNU4-28P-201ENST00000364739 SMLR1H3BR10 107 aa0.32□□□□□ -2.36
RNU4-28P-201ENST00000364739 MSNP26038 577 aaKnown RBP0.32□□□□□ -2.36
RNU4-28P-201ENST00000364739 KDELR2P33947 212 aa0.32□□□□□ -2.36
RNU4-28P-201ENST00000364739 HLA-DRB3P79483 266 aa0.32□□□□□ -2.36
RNU4-28P-201ENST00000364739 JOSD1Q15040 202 aaPredicted RBP0.32□□□□□ -2.36
RNU4-28P-201ENST00000364739 HLA-DRB5Q30154 266 aa0.32□□□□□ -2.36
RNU4-28P-201ENST00000364739 DNAL1Q4LDG9 190 aa0.32□□□□□ -2.36
RNU4-28P-201ENST00000364739 COPS6Q7L5N1 327 aa0.32□□□□□ -2.36
RNU4-28P-201ENST00000364739 OR5B17Q8NGF7 314 aa0.32□□□□□ -2.36
RNU4-28P-201ENST00000364739 OR8B3Q8NGG8 313 aa0.32□□□□□ -2.36
RNU4-28P-201ENST00000364739 SLC37A2Q8TED4 501 aa0.32□□□□□ -2.36
RNU4-28P-201ENST00000364739 A0A1W2PP64 1363 aa0.32□□□□□ -2.36
RNU4-28P-201ENST00000364739 RIMS2Q9UQ26 1411 aa0.31□□□□□ -2.36
RNU4-28P-201ENST00000364739 COX7A2LO14548 114 aa0.31□□□□□ -2.36
RNU4-28P-201ENST00000364739 NSA2O95478 260 aaKnown RBP0.31□□□□□ -2.36
RNU4-28P-201ENST00000364739 HIST1H1CP16403 213 aaKnown RBP0.31□□□□□ -2.36
RNU4-28P-201ENST00000364739 CLDN12P56749 244 aa0.31□□□□□ -2.36
RNU4-28P-201ENST00000364739 RPL30P62888 115 aaKnown RBP0.31□□□□□ -2.36
RNU4-28P-201ENST00000364739 AKR1C1Q04828 323 aa0.31□□□□□ -2.36
RNU4-28P-201ENST00000364739 TEX36Q5VZQ5 186 aa0.31□□□□□ -2.36
RNU4-28P-201ENST00000364739 OR5AK3PQ8NH89 298 aa0.31□□□□□ -2.36
RNU4-28P-201ENST00000364739 OBSCN-AS1Q96MR7 158 aa0.31□□□□□ -2.36
RNU4-28P-201ENST00000364739 RBP7Q96R05 134 aa0.31□□□□□ -2.36
RNU4-28P-201ENST00000364739 TIPINQ9BVW5 301 aa0.31□□□□□ -2.36
RNU4-28P-201ENST00000364739 CD300AQ9UGN4 299 aa0.31□□□□□ -2.36
RNU4-28P-201ENST00000364739 MAST2Q6P0Q8 1798 aa0.31□□□□□ -2.36
RNU4-28P-201ENST00000364739 ITGB1BP1O14713 200 aa0.3□□□□□ -2.36
RNU4-28P-201ENST00000364739 LRRC26Q2I0M4 334 aa0.3□□□□□ -2.36
RNU4-28P-201ENST00000364739 CCL13Q99616 98 aa0.3□□□□□ -2.36
RNU4-28P-201ENST00000364739 HRASLSQ9HDD0 168 aa0.3□□□□□ -2.36
RNU4-28P-201ENST00000364739 C1orf109Q9NX04 203 aa0.3□□□□□ -2.36
RNU4-28P-201ENST00000364739 MUC5ACP98088 5654 aa0.29□□□□□ -2.36
RNU4-28P-201ENST00000364739 EIF4G1Q04637 1599 aaKnown RBP0.29□□□□□ -2.36
RNU4-28P-201ENST00000364739 SDCBPO00560 298 aaPredicted RBP0.29□□□□□ -2.36
RNU4-28P-201ENST00000364739 IL6P05231 212 aa0.29□□□□□ -2.36
RNU4-28P-201ENST00000364739 S100A9P06702 114 aaKnown RBP0.29□□□□□ -2.36
RNU4-28P-201ENST00000364739 ZNF676Q8N7Q3 588 aa0.29□□□□□ -2.36
RNU4-28P-201ENST00000364739 TRABDQ9H4I3 376 aa0.29□□□□□ -2.36
RNU4-28P-201ENST00000364739 TRBV6-7A0A0A0MS04 114 aa0.28□□□□□ -2.36
RNU4-28P-201ENST00000364739 C5orf49A4QMS7 147 aa0.28□□□□□ -2.36
RNU4-28P-201ENST00000364739 RPS24P62847 133 aaKnown RBP0.28□□□□□ -2.36
RNU4-28P-201ENST00000364739 RUNX1Q01196 453 aa0.28□□□□□ -2.36
RNU4-28P-201ENST00000364739 SLAMF1Q13291 335 aa0.28□□□□□ -2.36
RNU4-28P-201ENST00000364739 CDK10Q15131 360 aa0.28□□□□□ -2.36
RNU4-28P-201ENST00000364739 DHFR2Q86XF0 187 aa0.28□□□□□ -2.36
RNU4-28P-201ENST00000364739 SGMS2Q8NHU3 365 aa0.28□□□□□ -2.36
RNU4-28P-201ENST00000364739 GNPNAT1Q96EK6 184 aaPredicted RBP0.28□□□□□ -2.36
RNU4-28P-201ENST00000364739 ANKRD36BP1Q96IX9 119 aa0.28□□□□□ -2.36
RNU4-28P-201ENST00000364739 SERPINI1Q99574 410 aa0.28□□□□□ -2.36
RNU4-28P-201ENST00000364739 OR8D2Q9GZM6 311 aa0.28□□□□□ -2.36
RNU4-28P-201ENST00000364739 CXorf21Q9HAI6 301 aa0.28□□□□□ -2.36
RNU4-28P-201ENST00000364739 COQ4Q9Y3A0 265 aa0.28□□□□□ -2.36
RNU4-28P-201ENST00000364739 COL4A5P29400 1685 aa0.27□□□□□ -2.37
RNU4-28P-201ENST00000364739 TRAV14DV4A0A0A6YYC5 116 aa0.27□□□□□ -2.37
RNU4-28P-201ENST00000364739 CCRL2O00421 344 aa0.27□□□□□ -2.37
RNU4-28P-201ENST00000364739 LEPROTO15243 131 aa0.27□□□□□ -2.37
RNU4-28P-201ENST00000364739 MSMBP08118 114 aa0.27□□□□□ -2.37
RNU4-28P-201ENST00000364739 HLA-DMBP28068 263 aa0.27□□□□□ -2.37
RNU4-28P-201ENST00000364739 SSX8Q7RTT4 187 aa0.27□□□□□ -2.37
RNU4-28P-201ENST00000364739 C10orf67Q8IYJ2 551 aa0.27□□□□□ -2.37
RNU4-28P-201ENST00000364739 C17orf78Q8N4C9 275 aa0.27□□□□□ -2.37
RNU4-28P-201ENST00000364739 C12orf29Q8N999 325 aa0.27□□□□□ -2.37
RNU4-28P-201ENST00000364739 AQP3Q92482 292 aa0.27□□□□□ -2.37
RNU4-28P-201ENST00000364739 MRPL57Q9BQC6 102 aaKnown RBP0.27□□□□□ -2.37
RNU4-28P-201ENST00000364739 CFAP45Q9UL16 551 aa0.27□□□□□ -2.37
RNU4-28P-201ENST00000364739 PRELID1Q9Y255 219 aa0.27□□□□□ -2.37
RNU4-28P-201ENST00000364739 NAV2Q8IVL1 2488 aa0.27□□□□□ -2.37
RNU4-28P-201ENST00000364739 TRBV10-2A0A0K0K1G8 114 aa0.26□□□□□ -2.37
RNU4-28P-201ENST00000364739 IRGMA1A4Y4 181 aa0.26□□□□□ -2.37
RNU4-28P-201ENST00000364739 MKRN2OSH3BPM6 223 aa0.26□□□□□ -2.37
RNU4-28P-201ENST00000364739 APOMO95445 188 aa0.26□□□□□ -2.37
RNU4-28P-201ENST00000364739 PMP2P02689 132 aa0.26□□□□□ -2.37
RNU4-28P-201ENST00000364739 CD40LGP29965 261 aa0.26□□□□□ -2.37
RNU4-28P-201ENST00000364739 HAAOP46952 286 aa0.26□□□□□ -2.37
RNU4-28P-201ENST00000364739 ZNF345Q14585 488 aa0.26□□□□□ -2.37
RNU4-28P-201ENST00000364739 CRLF3Q8IUI8 442 aa0.26□□□□□ -2.37
RNU4-28P-201ENST00000364739 OR2T27Q8NH04 317 aa0.26□□□□□ -2.37
RNU4-28P-201ENST00000364739 ASB13Q8WXK3 278 aa0.26□□□□□ -2.37
RNU4-28P-201ENST00000364739 BBS2Q9BXC9 721 aa0.26□□□□□ -2.37
RNU4-28P-201ENST00000364739 MS4A6AQ9H2W1 248 aa0.26□□□□□ -2.37
RNU4-28P-201ENST00000364739 BAIAP2Q9UQB8 552 aa0.26□□□□□ -2.37
RNU4-28P-201ENST00000364739 TP53TG1Q9Y2A0 90 aa0.26□□□□□ -2.37
RNU4-28P-201ENST00000364739 SYNRGQ9UMZ2 1314 aa0.26□□□□□ -2.37
RNU4-28P-201ENST00000364739 KMT2DO14686 5537 aa0.26□□□□□ -2.37
RNU4-28P-201ENST00000364739 SNRNP200O75643 2136 aaKnown RBP0.25□□□□□ -2.37
RNU4-28P-201ENST00000364739 CEP192Q8TEP8 1941 aa0.25□□□□□ -2.37
RNU4-28P-201ENST00000364739 K7ERQ8 282 aa0.25□□□□□ -2.37
RNU4-28P-201ENST00000364739 STX10O60499 249 aa0.25□□□□□ -2.37
RNU4-28P-201ENST00000364739 EBPQ15125 230 aaKnown RBP0.25□□□□□ -2.37
RNU4-28P-201ENST00000364739 OR5L1Q8NGL2 311 aa0.25□□□□□ -2.37
RNU4-28P-201ENST00000364739 OR4C6Q8NH72 309 aa0.25□□□□□ -2.37
RNU4-28P-201ENST00000364739 ERMAPQ96PL5 475 aaPredicted RBP0.25□□□□□ -2.37
RNU4-28P-201ENST00000364739 RALGAPA2Q2PPJ7 1873 aa0.24□□□□□ -2.37
RNU4-28P-201ENST00000364739 ZNF462Q96JM2 2506 aa0.24□□□□□ -2.37
RNU4-28P-201ENST00000364739 LRPPRCP42704 1394 aaKnown RBP0.24□□□□□ -2.37
RNU4-28P-201ENST00000364739 TEX50A0A1B0GTY4 177 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms