RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 DNAJC4Q9NNZ3 241 aa17.21■□□□□ 0.35
CDC42BPB-201ENST00000361246 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.2■□□□□ 0.34
CDC42BPB-201ENST00000361246 HKR1P10072 659 aa17.2■□□□□ 0.34
CDC42BPB-201ENST00000361246 LINC00299Q6ZSB3 139 aa17.2■□□□□ 0.34
CDC42BPB-201ENST00000361246 LSM10Q969L4 123 aaKnown RBP17.2■□□□□ 0.34
CDC42BPB-201ENST00000361246 EFEMP2O95967 443 aa17.2■□□□□ 0.34
CDC42BPB-201ENST00000361246 DNM1P46Q6ZS02 220 aa17.2■□□□□ 0.34
CDC42BPB-201ENST00000361246 RTTNQ86VV8 2226 aa17.2■□□□□ 0.34
CDC42BPB-201ENST00000361246 TRGV2A0A075B6R0 118 aa17.2■□□□□ 0.34
CDC42BPB-201ENST00000361246 PRSS2P07478 247 aa17.2■□□□□ 0.34
CDC42BPB-201ENST00000361246 FOXF2Q12947 444 aa17.2■□□□□ 0.34
CDC42BPB-201ENST00000361246 RPL24P83731 157 aaKnown RBP17.2■□□□□ 0.34
CDC42BPB-201ENST00000361246 PKIBQ9C010 78 aa17.2■□□□□ 0.34
CDC42BPB-201ENST00000361246 SCN10AQ9Y5Y9 1956 aa17.2■□□□□ 0.34
CDC42BPB-201ENST00000361246 ARPC1AQ92747 370 aa17.2■□□□□ 0.34
CDC42BPB-201ENST00000361246 CRYBB3P26998 211 aa17.19■□□□□ 0.34
CDC42BPB-201ENST00000361246 ZNF343Q6P1L6 599 aa17.19■□□□□ 0.34
CDC42BPB-201ENST00000361246 KIR3DL3Q8N743 410 aa17.19■□□□□ 0.34
CDC42BPB-201ENST00000361246 JPT1Q9UK76 154 aa17.19■□□□□ 0.34
CDC42BPB-201ENST00000361246 G6PC2Q9NQR9 355 aa17.19■□□□□ 0.34
CDC42BPB-201ENST00000361246 CYB561D1Q8N8Q1 229 aa17.19■□□□□ 0.34
CDC42BPB-201ENST00000361246 CDS2O95674 445 aa17.19■□□□□ 0.34
CDC42BPB-201ENST00000361246 FOXC2Q99958 501 aa17.19■□□□□ 0.34
CDC42BPB-201ENST00000361246 CBLN4Q9NTU7 201 aa17.19■□□□□ 0.34
CDC42BPB-201ENST00000361246 NUTF2P61970 127 aaKnown RBP17.19■□□□□ 0.34
CDC42BPB-201ENST00000361246 MRAP2Q96G30 205 aa17.19■□□□□ 0.34
CDC42BPB-201ENST00000361246 MRPL20Q9BYC9 149 aaKnown RBP17.19■□□□□ 0.34
CDC42BPB-201ENST00000361246 COMPP49747 757 aaPredicted RBP17.18■□□□□ 0.34
CDC42BPB-201ENST00000361246 SUMO2P61956 95 aaKnown RBP17.18■□□□□ 0.34
CDC42BPB-201ENST00000361246 ICAM4Q14773 271 aa17.18■□□□□ 0.34
CDC42BPB-201ENST00000361246 UBE2DNLQ8IWF7 75 aa17.18■□□□□ 0.34
CDC42BPB-201ENST00000361246 F11RQ9Y624 299 aaKnown RBP17.18■□□□□ 0.34
CDC42BPB-201ENST00000361246 C1QTNF12Q5T7M4 302 aa17.18■□□□□ 0.34
CDC42BPB-201ENST00000361246 TMEM222Q9H0R3 208 aa17.18■□□□□ 0.34
CDC42BPB-201ENST00000361246 WDR90Q96KV7 1748 aa17.18■□□□□ 0.34
CDC42BPB-201ENST00000361246 RIPPLY3P57055 190 aa17.18■□□□□ 0.34
CDC42BPB-201ENST00000361246 C1QL2Q7Z5L3 287 aa17.18■□□□□ 0.34
CDC42BPB-201ENST00000361246 DPM3Q9P2X0 92 aa17.18■□□□□ 0.34
CDC42BPB-201ENST00000361246 THBDP07204 575 aa17.18■□□□□ 0.34
CDC42BPB-201ENST00000361246 ZNF883P0CG24 379 aa17.18■□□□□ 0.34
CDC42BPB-201ENST00000361246 TSPOP30536 169 aa17.18■□□□□ 0.34
CDC42BPB-201ENST00000361246 PTGDSP41222 190 aa17.18■□□□□ 0.34
CDC42BPB-201ENST00000361246 ANK1P16157 1881 aa17.18■□□□□ 0.34
CDC42BPB-201ENST00000361246 HSPE1P61604 102 aaKnown RBP17.18■□□□□ 0.34
CDC42BPB-201ENST00000361246 IFITM10A6NMD0 228 aa17.17■□□□□ 0.34
CDC42BPB-201ENST00000361246 TNFRSF9Q07011 255 aa17.17■□□□□ 0.34
CDC42BPB-201ENST00000361246 DEFB104AQ8WTQ1 72 aa17.17■□□□□ 0.34
CDC42BPB-201ENST00000361246 CFHR1Q03591 330 aa17.17■□□□□ 0.34
CDC42BPB-201ENST00000361246 SMAGPQ0VAQ4 97 aa17.17■□□□□ 0.34
CDC42BPB-201ENST00000361246 SGMS2Q8NHU3 365 aa17.17■□□□□ 0.34
CDC42BPB-201ENST00000361246 RARRES2Q99969 163 aa17.17■□□□□ 0.34
CDC42BPB-201ENST00000361246 TOMM7Q9P0U1 55 aa17.17■□□□□ 0.34
CDC42BPB-201ENST00000361246 TRAV30A0A087WSZ9 112 aa17.17■□□□□ 0.34
CDC42BPB-201ENST00000361246 CA2P00918 260 aa17.17■□□□□ 0.34
CDC42BPB-201ENST00000361246 PSG7Q13046 419 aa17.17■□□□□ 0.34
CDC42BPB-201ENST00000361246 TRAV20A0A0B4J274 112 aa17.17■□□□□ 0.34
CDC42BPB-201ENST00000361246 C7orf71A4D174 169 aa17.17■□□□□ 0.34
CDC42BPB-201ENST00000361246 DOCK6Q96HP0 2047 aa17.17■□□□□ 0.34
CDC42BPB-201ENST00000361246 PHYHIPLQ96FC7 376 aa17.17■□□□□ 0.34
CDC42BPB-201ENST00000361246 BEX4Q9NWD9 120 aaPredicted RBP17.17■□□□□ 0.34
CDC42BPB-201ENST00000361246 HMSDA8MTL9 139 aa17.17■□□□□ 0.34
CDC42BPB-201ENST00000361246 RRHO14718 337 aa17.17■□□□□ 0.34
CDC42BPB-201ENST00000361246 EGR1P18146 543 aa17.17■□□□□ 0.34
CDC42BPB-201ENST00000361246 SIAH2O43255 324 aa17.16■□□□□ 0.34
CDC42BPB-201ENST00000361246 HOXB1P14653 301 aaPredicted RBP17.16■□□□□ 0.34
CDC42BPB-201ENST00000361246 DNLZQ5SXM8 178 aa17.16■□□□□ 0.34
CDC42BPB-201ENST00000361246 C8orf82Q6P1X6 216 aaPredicted RBP17.16■□□□□ 0.34
CDC42BPB-201ENST00000361246 GCGP01275 180 aa17.16■□□□□ 0.34
CDC42BPB-201ENST00000361246 KLRD1Q13241 179 aa17.16■□□□□ 0.34
CDC42BPB-201ENST00000361246 ASPHD2Q6ICH7 369 aa17.16■□□□□ 0.34
CDC42BPB-201ENST00000361246 OR13A1Q8NGR1 328 aa17.16■□□□□ 0.34
CDC42BPB-201ENST00000361246 GEMIN7Q9H840 131 aaKnown RBP17.16■□□□□ 0.34
CDC42BPB-201ENST00000361246 TCF19Q9Y242 345 aa17.16■□□□□ 0.34
CDC42BPB-201ENST00000361246 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.16■□□□□ 0.34
CDC42BPB-201ENST00000361246 LDLRAD2Q5SZI1 272 aa17.16■□□□□ 0.34
CDC42BPB-201ENST00000361246 C8orf46Q8TAG6 207 aa17.16■□□□□ 0.34
CDC42BPB-201ENST00000361246 WISP3O95389 354 aaPredicted RBP17.16■□□□□ 0.34
CDC42BPB-201ENST00000361246 AQP3Q92482 292 aa17.16■□□□□ 0.34
CDC42BPB-201ENST00000361246 C17orf100A8MU93 164 aa17.16■□□□□ 0.34
CDC42BPB-201ENST00000361246 ZNF708P17019 499 aa17.16■□□□□ 0.34
CDC42BPB-201ENST00000361246 C11orf68Q9H3H3 251 aaKnown RBP17.16■□□□□ 0.34
CDC42BPB-201ENST00000361246 CD33P20138 364 aa17.15■□□□□ 0.34
CDC42BPB-201ENST00000361246 DEPPQ9NTK1 212 aa17.15■□□□□ 0.34
CDC42BPB-201ENST00000361246 MSGN1A6NI15 193 aa17.15■□□□□ 0.34
CDC42BPB-201ENST00000361246 KIAA1644Q3SXP7 199 aa17.15■□□□□ 0.34
CDC42BPB-201ENST00000361246 LOC107984156A0A0G2JMH3 177 aa17.15■□□□□ 0.34
CDC42BPB-201ENST00000361246 ZNF415Q09FC8 603 aa17.15■□□□□ 0.34
CDC42BPB-201ENST00000361246 ARL17AQ8IVW1 177 aa17.15■□□□□ 0.34
CDC42BPB-201ENST00000361246 CACNG7P62955 275 aa17.15■□□□□ 0.34
CDC42BPB-201ENST00000361246 OR4A47Q6IF82 309 aa17.15■□□□□ 0.34
CDC42BPB-201ENST00000361246 SBF1O95248 1867 aa17.15■□□□□ 0.34
CDC42BPB-201ENST00000361246 CD1AP06126 327 aa17.15■□□□□ 0.34
CDC42BPB-201ENST00000361246 ZNF25P17030 456 aaPredicted RBP17.15■□□□□ 0.34
CDC42BPB-201ENST00000361246 GTSCR1Q86UQ5 136 aa17.15■□□□□ 0.34
CDC42BPB-201ENST00000361246 BET1LQ9NYM9 111 aa17.15■□□□□ 0.34
CDC42BPB-201ENST00000361246 CEP290O15078 2479 aa17.14■□□□□ 0.33
CDC42BPB-201ENST00000361246 ZNF256Q9Y2P7 627 aaPredicted RBP17.14■□□□□ 0.33
CDC42BPB-201ENST00000361246 TMEM252Q8N6L7 170 aa17.14■□□□□ 0.33
CDC42BPB-201ENST00000361246 GCM2O75603 506 aaPredicted RBP17.14■□□□□ 0.33
CDC42BPB-201ENST00000361246 WFIKKN1Q96NZ8 548 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms