RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 SPNS3Q6ZMD2 512 aa18.65■□□□□ 0.58
LDB1-201ENST00000361198 ZNF788Q6ZQV5 615 aa18.65■□□□□ 0.58
LDB1-201ENST00000361198 C1orf229Q6ZS94 237 aaPredicted RBP18.65■□□□□ 0.58
LDB1-201ENST00000361198 FAM216AQ8WUB2 273 aa18.65■□□□□ 0.58
LDB1-201ENST00000361198 KBTBD11-OT1A0A1B0GTJ5 212 aa18.65■□□□□ 0.58
LDB1-201ENST00000361198 C17orf100A8MU93 164 aa18.65■□□□□ 0.58
LDB1-201ENST00000361198 NDUFS6O75380 124 aaKnown RBP18.65■□□□□ 0.58
LDB1-201ENST00000361198 OPN1MWP04001 364 aa18.65■□□□□ 0.58
LDB1-201ENST00000361198 OPN1MW2P0DN77 364 aa18.65■□□□□ 0.58
LDB1-201ENST00000361198 OPN1MW3P0DN78 364 aa18.65■□□□□ 0.58
LDB1-201ENST00000361198 MEF2BQ02080 365 aaPredicted RBP18.65■□□□□ 0.58
LDB1-201ENST00000361198 TCF23Q7RTU1 214 aa18.65■□□□□ 0.58
LDB1-201ENST00000361198 DTD1Q8TEA8 209 aa18.65■□□□□ 0.58
LDB1-201ENST00000361198 ABHD5Q8WTS1 349 aa18.65■□□□□ 0.58
LDB1-201ENST00000361198 IRF2P14316 349 aa18.64■□□□□ 0.57
LDB1-201ENST00000361198 SPINK9Q5DT21 86 aa18.64■□□□□ 0.57
LDB1-201ENST00000361198 GFOD1Q9NXC2 390 aa18.64■□□□□ 0.57
LDB1-201ENST00000361198 TRGV10A0A0A0MS01 117 aa18.63■□□□□ 0.57
LDB1-201ENST00000361198 PHOX2AO14813 284 aa18.63■□□□□ 0.57
LDB1-201ENST00000361198 MBP02144 154 aa18.63■□□□□ 0.57
LDB1-201ENST00000361198 OR9G9P0C7N8 305 aa18.63■□□□□ 0.57
LDB1-201ENST00000361198 PYY3Q5JQD4 70 aa18.63■□□□□ 0.57
LDB1-201ENST00000361198 TEX36Q5VZQ5 186 aa18.63■□□□□ 0.57
LDB1-201ENST00000361198 CYP2G1PQ6ZSU1 146 aa18.63■□□□□ 0.57
LDB1-201ENST00000361198 WFIKKN1Q96NZ8 548 aa18.63■□□□□ 0.57
LDB1-201ENST00000361198 NAT8Q9UHE5 227 aa18.63■□□□□ 0.57
LDB1-201ENST00000361198 YLPM1P49750 1951 aaKnown RBP18.63■□□□□ 0.57
LDB1-201ENST00000361198 CTXND1A0A1B0GTU2 59 aa18.63■□□□□ 0.57
LDB1-201ENST00000361198 HPRT1P00492 218 aa18.63■□□□□ 0.57
LDB1-201ENST00000361198 TNFRSF1AP19438 455 aa18.63■□□□□ 0.57
LDB1-201ENST00000361198 S100A2P29034 98 aa18.63■□□□□ 0.57
LDB1-201ENST00000361198 VWC2Q2TAL6 325 aa18.63■□□□□ 0.57
LDB1-201ENST00000361198 CT45A1Q5HYN5 189 aa18.63■□□□□ 0.57
LDB1-201ENST00000361198 OR10P1Q8NGE3 313 aa18.63■□□□□ 0.57
LDB1-201ENST00000361198 CT45A3Q8NHU0 189 aa18.63■□□□□ 0.57
LDB1-201ENST00000361198 RND1Q92730 232 aa18.63■□□□□ 0.57
LDB1-201ENST00000361198 CIB3Q96Q77 187 aaPredicted RBP18.63■□□□□ 0.57
LDB1-201ENST00000361198 ELOA3CA0A087WX78 387 aaPredicted RBP18.62■□□□□ 0.57
LDB1-201ENST00000361198 TMEM250H0YL14 139 aa18.62■□□□□ 0.57
LDB1-201ENST00000361198 SSX9Q7RTT3 188 aa18.62■□□□□ 0.57
LDB1-201ENST00000361198 RBPJQ06330 500 aa18.62■□□□□ 0.57
LDB1-201ENST00000361198 FRZBQ92765 325 aa18.62■□□□□ 0.57
LDB1-201ENST00000361198 SSX3Q99909 188 aa18.62■□□□□ 0.57
LDB1-201ENST00000361198 QTRT1Q9BXR0 403 aaKnown RBP18.62■□□□□ 0.57
LDB1-201ENST00000361198 KBTBD11O94819 623 aa18.61■□□□□ 0.57
LDB1-201ENST00000361198 TRGC1P0CF51 173 aa18.61■□□□□ 0.57
LDB1-201ENST00000361198 MDKP21741 143 aaPredicted RBP18.61■□□□□ 0.57
LDB1-201ENST00000361198 VKORC1L1Q8N0U8 176 aa18.61■□□□□ 0.57
LDB1-201ENST00000361198 SMIM7Q9BQ49 75 aa18.61■□□□□ 0.57
LDB1-201ENST00000361198 ITGB1BP1O14713 200 aa18.61■□□□□ 0.57
LDB1-201ENST00000361198 RPS16P62249 146 aaKnown RBP18.61■□□□□ 0.57
LDB1-201ENST00000361198 TMEM241Q24JQ0 296 aa18.61■□□□□ 0.57
LDB1-201ENST00000361198 HIST3H2BBQ8N257 126 aa18.61■□□□□ 0.57
LDB1-201ENST00000361198 DIRC2Q96SL1 478 aa18.61■□□□□ 0.57
LDB1-201ENST00000361198 RAB9BQ9NP90 201 aa18.61■□□□□ 0.57
LDB1-201ENST00000361198 DMRT1Q9Y5R6 373 aa18.61■□□□□ 0.57
LDB1-201ENST00000361198 RELNP78509 3460 aa18.61■□□□□ 0.57
LDB1-201ENST00000361198 PPP1R2P9O14990 202 aa18.6■□□□□ 0.57
LDB1-201ENST00000361198 TMPRSS2O15393 492 aa18.6■□□□□ 0.57
LDB1-201ENST00000361198 FGF7P21781 194 aa18.6■□□□□ 0.57
LDB1-201ENST00000361198 PSMB3P49720 205 aa18.6■□□□□ 0.57
LDB1-201ENST00000361198 RAB7AP51149 207 aa18.6■□□□□ 0.57
LDB1-201ENST00000361198 GNB2P62879 340 aa18.6■□□□□ 0.57
LDB1-201ENST00000361198 OR10G9Q8NGN4 311 aa18.6■□□□□ 0.57
LDB1-201ENST00000361198 OR10G7Q8NGN6 311 aa18.6■□□□□ 0.57
LDB1-201ENST00000361198 S1PR3Q99500 378 aa18.6■□□□□ 0.57
LDB1-201ENST00000361198 SAA2-SAA4A0A096LPE2 208 aa18.6■□□□□ 0.57
LDB1-201ENST00000361198 RBFOX2O43251 390 aaKnown RBP eCLIP18.6■□□□□ 0.572e-7■■■□□ 16
LDB1-201ENST00000361198 MMP23AO75900 390 aa18.6■□□□□ 0.57
LDB1-201ENST00000361198 SOD3P08294 240 aa18.6■□□□□ 0.57
LDB1-201ENST00000361198 SAA2P0DJI9 122 aaPredicted RBP18.6■□□□□ 0.57
LDB1-201ENST00000361198 TMPRSS3P57727 454 aa18.6■□□□□ 0.57
LDB1-201ENST00000361198 TLE1Q04724 770 aa18.6■□□□□ 0.57
LDB1-201ENST00000361198 SSX8Q7RTT4 187 aa18.6■□□□□ 0.57
LDB1-201ENST00000361198 DDB2Q92466 427 aa18.6■□□□□ 0.57
LDB1-201ENST00000361198 SLC25A22Q9H936 323 aa18.6■□□□□ 0.57
LDB1-201ENST00000361198 NHLH1Q02575 133 aa18.59■□□□□ 0.57
LDB1-201ENST00000361198 HNF4GQ14541 408 aa18.59■□□□□ 0.57
LDB1-201ENST00000361198 PRAMEF5Q5TYX0 476 aa18.59■□□□□ 0.57
LDB1-201ENST00000361198 VKORC1Q9BQB6 163 aa18.59■□□□□ 0.57
LDB1-201ENST00000361198 PYGO2Q9BRQ0 406 aa18.59■□□□□ 0.57
LDB1-201ENST00000361198 NPCDR1Q9BY65 106 aa18.59■□□□□ 0.57
LDB1-201ENST00000361198 GAB2Q9UQC2 676 aa18.59■□□□□ 0.57
LDB1-201ENST00000361198 GFRA3O60609 400 aa18.58■□□□□ 0.57
LDB1-201ENST00000361198 PFN1P07737 140 aaKnown RBP18.58■□□□□ 0.57
LDB1-201ENST00000361198 ACTR3CQ9C0K3 210 aaPredicted RBP18.58■□□□□ 0.57
LDB1-201ENST00000361198 SAP30LQ9HAJ7 183 aa18.58■□□□□ 0.57
LDB1-201ENST00000361198 MANBALQ9NQG1 85 aa18.58■□□□□ 0.57
LDB1-201ENST00000361198 ZNF729A6NN14 1252 aaPredicted RBP18.58■□□□□ 0.56
LDB1-201ENST00000361198 PLA2G5P39877 138 aa18.58■□□□□ 0.56
LDB1-201ENST00000361198 FFAR4Q5NUL3 377 aa18.58■□□□□ 0.56
LDB1-201ENST00000361198 GFI1BQ5VTD9 330 aa18.58■□□□□ 0.56
LDB1-201ENST00000361198 ZNF439Q8NDP4 499 aa18.58■□□□□ 0.56
LDB1-201ENST00000361198 SPTBN4Q9H254 2564 aa18.58■□□□□ 0.56
LDB1-201ENST00000361198 IDI2-AS1Q9NZ38 188 aa18.58■□□□□ 0.56
LDB1-201ENST00000361198 TRAV20A0A0B4J274 112 aa18.57■□□□□ 0.56
LDB1-201ENST00000361198 TRGV8A0A0C4DH27 118 aa18.57■□□□□ 0.56
LDB1-201ENST00000361198 TFF3Q07654 80 aa18.57■□□□□ 0.56
LDB1-201ENST00000361198 AARDQ4LEZ3 155 aa18.57■□□□□ 0.56
LDB1-201ENST00000361198 LURAP1LQ8IV03 231 aa18.57■□□□□ 0.56
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