RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 C5orf56Q8N8D9 126 aa9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 FBXL15Q9H469 300 aa9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 GPN1Q9HCN4 374 aaPredicted RBP9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 BET1LQ9NYM9 111 aa9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 KIAA1456Q9P272 454 aa9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 METTL1Q9UBP6 276 aaKnown RBP9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 SIGLEC9Q9Y336 463 aa9.86□□□□□ -0.83
NIF3L1-201ENST00000359683 A0A0B4J293 547 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 OR2A4O95047 310 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 P0C879 139 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 ERVK-16P61578 105 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 MRGPRG-AS1Q2M3A8 158 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 OR4A47Q6IF82 309 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 SSX9Q7RTT3 188 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 DMBX1Q8NFW5 382 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 COQ8AQ8NI60 647 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 VSTM2AQ8TAG5 236 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 TMEM167AQ8TBQ9 72 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 OR2A7Q96R45 310 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 DUXBA0A1W2PPF3 345 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 C7orf66A4D0T2 115 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 VDAC1P21796 283 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 RPL15P61313 204 aaKnown RBP9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 TATDN3Q17R31 274 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 LIN54Q6MZP7 749 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 LYZL2Q7Z4W2 148 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 PPP1R27Q86WC6 154 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 C12orf45Q8N5I9 185 aaPredicted RBP9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 SLC35G3Q8N808 338 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 OR4A5Q8NH83 315 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 LSM10Q969L4 123 aaKnown RBP9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 PHB2Q99623 299 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 RASL11BQ9BPW5 248 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 TPSG1Q9NRR2 321 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 TMEM140Q9NV12 185 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 MMP24Q9Y5R2 645 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 TNCP24821 2201 aa9.85□□□□□ -0.83
NIF3L1-201ENST00000359683 A0A0G2JRQ6 117 aa9.84□□□□□ -0.83
NIF3L1-201ENST00000359683 FAM181BA6NEQ2 426 aa9.84□□□□□ -0.83
NIF3L1-201ENST00000359683 DBX1A6NMT0 343 aa9.84□□□□□ -0.83
NIF3L1-201ENST00000359683 UPK2O00526 184 aa9.84□□□□□ -0.83
NIF3L1-201ENST00000359683 FCN1O00602 326 aa9.84□□□□□ -0.83
NIF3L1-201ENST00000359683 CREBL2O60519 120 aaPredicted RBP9.84□□□□□ -0.83
NIF3L1-201ENST00000359683 KBTBD11O94819 623 aa9.84□□□□□ -0.83
NIF3L1-201ENST00000359683 BLCAPP62952 87 aa9.84□□□□□ -0.83
NIF3L1-201ENST00000359683 H2BFWTQ7Z2G1 175 aa9.84□□□□□ -0.83
NIF3L1-201ENST00000359683 FAM219AQ8IW50 185 aa9.84□□□□□ -0.83
NIF3L1-201ENST00000359683 RRNAD1Q96FB5 475 aaKnown RBP9.84□□□□□ -0.83
NIF3L1-201ENST00000359683 PLXNB1O43157 2135 aa9.83□□□□□ -0.84
NIF3L1-201ENST00000359683 TRAV3A0A0B4J244 114 aa9.83□□□□□ -0.84
NIF3L1-201ENST00000359683 TRIM77I1YAP6 450 aa9.83□□□□□ -0.84
NIF3L1-201ENST00000359683 HLA-DRB1P01911 266 aa9.83□□□□□ -0.84
NIF3L1-201ENST00000359683 FGF2P09038 288 aa9.83□□□□□ -0.84
NIF3L1-201ENST00000359683 AKR1C2P52895 323 aa9.83□□□□□ -0.84
NIF3L1-201ENST00000359683 PJVKQ0ZLH3 352 aa9.83□□□□□ -0.84
NIF3L1-201ENST00000359683 PLGLAQ15195 96 aa9.83□□□□□ -0.84
NIF3L1-201ENST00000359683 PRSS8Q16651 343 aa9.83□□□□□ -0.84
NIF3L1-201ENST00000359683 NMSQ5H8A3 153 aa9.83□□□□□ -0.84
NIF3L1-201ENST00000359683 GPR146Q96CH1 333 aa9.83□□□□□ -0.84
NIF3L1-201ENST00000359683 NPFFR1Q9GZQ6 430 aa9.83□□□□□ -0.84
NIF3L1-201ENST00000359683 ZNF430Q9H8G1 570 aaPredicted RBP9.83□□□□□ -0.84
NIF3L1-201ENST00000359683 TMED3Q9Y3Q3 217 aa9.83□□□□□ -0.84
NIF3L1-201ENST00000359683 ALG5Q9Y673 324 aa9.83□□□□□ -0.84
NIF3L1-201ENST00000359683 HOXB5P09067 269 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 OR9G9P0C7N8 305 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 RELBQ01201 579 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 IZUMO4Q1ZYL8 232 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 KRTAP24-1Q3LI83 254 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 ZNF562Q6V9R5 426 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 Q6ZRM9 215 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 MMD2Q8IY49 270 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 CLCC1Q96S66 551 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 OR51J1Q9H342 316 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 RANBP3Q9H6Z4 567 aaPredicted RBP9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 IGHV7-81A0A0B4J1V7 117 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 SH2D7A6NKC9 451 aaPredicted RBP9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 ADAP1O75689 374 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 SNAPC5O75971 98 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 CA2P00918 260 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 MAS1LP35410 378 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 RPL8P62917 257 aaKnown RBP9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 CX3CL1P78423 397 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 SSBP2P81877 361 aaPredicted RBP9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 GGNBP1Q5YKI7 109 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 Q6ZNX1 250 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 Q6ZS46 218 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 Q8N2B8 174 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 UXS1Q8NBZ7 420 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 RNASE11Q8TAA1 199 aaKnown RBP9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 PRSS22Q9GZN4 317 aa9.82□□□□□ -0.84
NIF3L1-201ENST00000359683 A0A1B0GU03 582 aa9.81□□□□□ -0.84
NIF3L1-201ENST00000359683 TSPAN9O75954 239 aa9.81□□□□□ -0.84
NIF3L1-201ENST00000359683 IGHG2P01859 326 aa9.81□□□□□ -0.84
NIF3L1-201ENST00000359683 CRYBA1P05813 215 aa9.81□□□□□ -0.84
NIF3L1-201ENST00000359683 SLC25A6P12236 298 aa9.81□□□□□ -0.84
NIF3L1-201ENST00000359683 HLA-GP17693 338 aa9.81□□□□□ -0.84
NIF3L1-201ENST00000359683 SRSF2Q01130 221 aaKnown RBP9.81□□□□□ -0.84
NIF3L1-201ENST00000359683 AARDQ4LEZ3 155 aa9.81□□□□□ -0.84
NIF3L1-201ENST00000359683 FOXRED2Q8IWF2 684 aa9.81□□□□□ -0.84
NIF3L1-201ENST00000359683 HSPB9Q9BQS6 159 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms