RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 Q56UQ5 140 aa10.35□□□□□ -0.75
COL20A1-201ENST00000358894 LYPD6Q86Y78 171 aa10.35□□□□□ -0.75
COL20A1-201ENST00000358894 MANBALQ9NQG1 85 aa10.35□□□□□ -0.75
COL20A1-201ENST00000358894 WASHC3Q9Y3C0 194 aa10.35□□□□□ -0.75
COL20A1-201ENST00000358894 CECR9P0C854 216 aa10.35□□□□□ -0.75
COL20A1-201ENST00000358894 OR4P4Q8NGL7 312 aa10.35□□□□□ -0.75
COL20A1-201ENST00000358894 LOC102723971A0A1B0GUV8 181 aa10.35□□□□□ -0.75
COL20A1-201ENST00000358894 C17orf98A8MV24 154 aa10.35□□□□□ -0.75
COL20A1-201ENST00000358894 MGST3O14880 152 aa10.35□□□□□ -0.75
COL20A1-201ENST00000358894 ZNF883P0CG24 379 aa10.35□□□□□ -0.75
COL20A1-201ENST00000358894 REG1BP48304 166 aa10.35□□□□□ -0.75
COL20A1-201ENST00000358894 KIAA1644Q3SXP7 199 aa10.35□□□□□ -0.75
COL20A1-201ENST00000358894 TMEM108Q6UXF1 575 aa10.35□□□□□ -0.75
COL20A1-201ENST00000358894 DOPEY2Q9Y3R5 2298 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 TRGV8A0A0C4DH27 118 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 NAPSAO96009 420 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 CXCL1P09341 107 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 NPY1RP25929 384 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 RHOBP62745 196 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 FAM201AQ5SY85 155 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 ZNF664Q8N3J9 261 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 TMEM171Q8WVE6 324 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 CCL13Q99616 98 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 WDR61Q9GZS3 305 aaKnown RBP10.34□□□□□ -0.75
COL20A1-201ENST00000358894 TECRQ9NZ01 308 aaKnown RBP10.34□□□□□ -0.75
COL20A1-201ENST00000358894 RNF7Q9UBF6 113 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 CNIH1O95406 144 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 SUB1P53999 127 aaKnown RBP eCLIP10.34□□□□□ -0.75
COL20A1-201ENST00000358894 HES1Q14469 280 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 OR10G8Q8NGN5 311 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 ALKBH7Q9BT30 221 aaPredicted RBP10.34□□□□□ -0.75
COL20A1-201ENST00000358894 SRD5A3Q9H8P0 318 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 DEFA4P12838 97 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 OR13A1Q8NGR1 328 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 SPSB4Q96A44 273 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 SPRR3Q9UBC9 169 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 ANAPC10Q9UM13 185 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 USF3Q68DE3 2245 aa10.34□□□□□ -0.75
COL20A1-201ENST00000358894 hADV38S2A0JD32 116 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 NDUFB3O43676 98 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 IL18BPO95998 194 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 CD55P08174 381 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 OR10J4P0C629 311 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 HLA-DRB5Q30154 266 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 ZNF506Q5JVG8 444 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 BEND2Q8NDZ0 799 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 LOXL4Q96JB6 756 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 NDUFB4O95168 129 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 IL3RAP26951 378 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 OPRK1P41145 380 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 AARDQ4LEZ3 155 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 MIC13Q5XKP0 118 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 C20orf204Q6ZNR8 217 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 ABHD12Q8N2K0 398 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 OR2D3Q8NGH3 330 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 COX7A2P2O60397 106 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 RAMP3O60896 148 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 LYL1P12980 280 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 UBE2G1P62253 170 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 P2RY6Q15077 328 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 SH2D2AQ9NP31 389 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 LINC00614P0C842 121 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 CD99P14209 185 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 CD33P20138 364 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 PSG5Q15238 335 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 ZNF324BQ6AW86 544 aaPredicted RBP10.33□□□□□ -0.76
COL20A1-201ENST00000358894 S100A7AQ86SG5 101 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 SELENOKQ9Y6D0 94 aa10.33□□□□□ -0.76
COL20A1-201ENST00000358894 SPATA45Q537H7 98 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 RPL39P5Q59GN2 51 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 ZNF525Q8N782 197 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 GUCD1Q96NT3 240 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 CRIM1Q9NZV1 1036 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 UQCR10Q9UDW1 63 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 GTF3C1Q12789 2109 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 FAM90A26D6RGX4 464 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 NPSP0C0P6 89 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 CD59P13987 128 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 ELOBQ15370 118 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 LRRC10Q5BKY1 277 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 CDPF1Q6NVV7 123 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 ACP7Q6ZNF0 438 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 C9orf106Q8NAJ2 232 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 CLDND2Q8NHS1 167 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 VSIRQ9H7M9 311 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 PXMP4Q9Y6I8 212 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 A0A0G2JRQ6 117 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 CSN3P07498 182 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 APELAP0DMC3 54 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 NMSQ5H8A3 153 aa10.32□□□□□ -0.76
COL20A1-201ENST00000358894 J3QR06 171 aa10.31□□□□□ -0.76
COL20A1-201ENST00000358894 TFF3Q07654 80 aa10.31□□□□□ -0.76
COL20A1-201ENST00000358894 FOXC1Q12948 553 aa10.31□□□□□ -0.76
COL20A1-201ENST00000358894 ICAM4Q14773 271 aa10.31□□□□□ -0.76
COL20A1-201ENST00000358894 DTX1Q86Y01 620 aa10.31□□□□□ -0.76
COL20A1-201ENST00000358894 OR4X1Q8NH49 305 aa10.31□□□□□ -0.76
COL20A1-201ENST00000358894 QTRT1Q9BXR0 403 aaKnown RBP10.31□□□□□ -0.76
COL20A1-201ENST00000358894 PARLQ9H300 379 aa10.31□□□□□ -0.76
COL20A1-201ENST00000358894 CISD1Q9NZ45 108 aaKnown RBP10.31□□□□□ -0.76
COL20A1-201ENST00000358894 A8MWP6 167 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms