RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 MC5RP33032 325 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 SAA4P35542 130 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 LGALS4P56470 323 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 SSX2Q16385 188 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 OSR1Q8TAX0 266 aaPredicted RBP14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 CFHR4Q92496 578 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 RITA1Q96K30 269 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 RHOVQ96L33 236 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 RAB40CQ96S21 281 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 AIFM2Q9BRQ8 373 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 TBL2Q9Y4P3 447 aaKnown RBP14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 IGHV3OR16-10A0A075B7F0 116 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 IGHV1-69DA0A0B4J2H0 117 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 NXPH3O95157 252 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 IGHV1-69P01742 117 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 RUSC1-AS1Q66K80 236 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 ZNF767PQ75MW2 155 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 OR8H3Q8N146 312 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 OR8H1Q8NGG4 311 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 FLYWCH2Q96CP2 140 aaKnown RBP14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 ARPC5LQ9BPX5 153 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 LYRM2Q9NU23 88 aaPredicted RBP14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 TMEM140Q9NV12 185 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 CACFD1Q9UGQ2 172 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 ABCA1O95477 2261 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 TRAV3A0A0B4J244 114 aa14.6□□□□□ -0.07
SMARCD3-202ENST00000356800 TRAV40A0A0B4J280 105 aa14.6□□□□□ -0.07
SMARCD3-202ENST00000356800 SHOXO15266 292 aa14.6□□□□□ -0.07
SMARCD3-202ENST00000356800 SYNGR2O43760 224 aa14.6□□□□□ -0.07
SMARCD3-202ENST00000356800 GPR137BO60478 399 aa14.6□□□□□ -0.07
SMARCD3-202ENST00000356800 TMEM50AO95807 157 aa14.6□□□□□ -0.07
SMARCD3-202ENST00000356800 IGHV4-38-2P0DP08 117 aa14.6□□□□□ -0.07
SMARCD3-202ENST00000356800 RAB13P51153 203 aa14.6□□□□□ -0.07
SMARCD3-202ENST00000356800 VAMP2P63027 116 aa14.6□□□□□ -0.07
SMARCD3-202ENST00000356800 TNFRSF9Q07011 255 aa14.6□□□□□ -0.07
SMARCD3-202ENST00000356800 HABP2Q14520 560 aaPredicted RBP14.6□□□□□ -0.07
SMARCD3-202ENST00000356800 OR4A47Q6IF82 309 aa14.6□□□□□ -0.07
SMARCD3-202ENST00000356800 OR4C13Q8NGP0 309 aa14.6□□□□□ -0.07
SMARCD3-202ENST00000356800 HARBI1Q96MB7 349 aa14.6□□□□□ -0.07
SMARCD3-202ENST00000356800 WSB1Q9Y6I7 421 aa14.6□□□□□ -0.07
SMARCD3-202ENST00000356800 OOSP1A8MZH6 123 aa14.59□□□□□ -0.07
SMARCD3-202ENST00000356800 TAAR5O14804 337 aa14.59□□□□□ -0.07
SMARCD3-202ENST00000356800 MED6O75586 246 aa14.59□□□□□ -0.07
SMARCD3-202ENST00000356800 IL6RP08887 468 aaPredicted RBP14.59□□□□□ -0.07
SMARCD3-202ENST00000356800 PAX9P55771 341 aa14.59□□□□□ -0.07
SMARCD3-202ENST00000356800 TAS2R30P59541 319 aa14.59□□□□□ -0.07
SMARCD3-202ENST00000356800 UBE2KP61086 200 aa14.59□□□□□ -0.07
SMARCD3-202ENST00000356800 KLF17Q5JT82 389 aaPredicted RBP14.59□□□□□ -0.07
SMARCD3-202ENST00000356800 OR2C3Q8N628 320 aa14.59□□□□□ -0.07
SMARCD3-202ENST00000356800 ZNF680Q8NEM1 530 aa14.59□□□□□ -0.07
SMARCD3-202ENST00000356800 MS4A7Q9GZW8 240 aaPredicted RBP14.59□□□□□ -0.07
SMARCD3-202ENST00000356800 PAIP2BQ9ULR5 123 aaKnown RBP14.59□□□□□ -0.07
SMARCD3-202ENST00000356800 TNCP24821 2201 aa14.59□□□□□ -0.07
SMARCD3-202ENST00000356800 TEX15Q9BXT5 2789 aa14.59□□□□□ -0.07
SMARCD3-202ENST00000356800 VENTXO95231 258 aa14.58□□□□□ -0.07
SMARCD3-202ENST00000356800 IGLV2-23P01705 113 aa14.58□□□□□ -0.07
SMARCD3-202ENST00000356800 RPS16P62249 146 aaKnown RBP14.58□□□□□ -0.07
SMARCD3-202ENST00000356800 RELBQ01201 579 aa14.58□□□□□ -0.07
SMARCD3-202ENST00000356800 FBLN7Q53RD9 439 aa14.58□□□□□ -0.07
SMARCD3-202ENST00000356800 MALSU1Q96EH3 234 aa14.58□□□□□ -0.07
SMARCD3-202ENST00000356800 ZC4H2Q9NQZ6 224 aa14.58□□□□□ -0.07
SMARCD3-202ENST00000356800 J3QLI3 93 aa14.58□□□□□ -0.08
SMARCD3-202ENST00000356800 IFNA7P01567 189 aa14.58□□□□□ -0.08
SMARCD3-202ENST00000356800 SAA1P0DJI8 122 aaPredicted RBP14.58□□□□□ -0.08
SMARCD3-202ENST00000356800 PDLIM3Q53GG5 364 aaPredicted RBP14.58□□□□□ -0.08
SMARCD3-202ENST00000356800 BRD3OSQ6XYD6 125 aa14.58□□□□□ -0.08
SMARCD3-202ENST00000356800 ZNF429Q86V71 674 aa14.58□□□□□ -0.08
SMARCD3-202ENST00000356800 OR52E5Q8NH55 327 aa14.58□□□□□ -0.08
SMARCD3-202ENST00000356800 OR4A16Q8NH70 328 aa14.58□□□□□ -0.08
SMARCD3-202ENST00000356800 SMIM8Q96KF7 97 aa14.58□□□□□ -0.08
SMARCD3-202ENST00000356800 SLC25A31Q9H0C2 315 aa14.58□□□□□ -0.08
SMARCD3-202ENST00000356800 FLNAP21333 2647 aaKnown RBP14.57□□□□□ -0.08
SMARCD3-202ENST00000356800 RBMXL2O75526 392 aaKnown RBP14.57□□□□□ -0.08
SMARCD3-202ENST00000356800 CFDP00746 253 aaPredicted RBP14.57□□□□□ -0.08
SMARCD3-202ENST00000356800 CD1BP29016 333 aa14.57□□□□□ -0.08
SMARCD3-202ENST00000356800 CAV2P51636 162 aa14.57□□□□□ -0.08
SMARCD3-202ENST00000356800 OR2B8PP59922 312 aa14.57□□□□□ -0.08
SMARCD3-202ENST00000356800 RPL23AP62750 156 aaKnown RBP14.57□□□□□ -0.08
SMARCD3-202ENST00000356800 UBA52P62987 128 aaKnown RBP14.57□□□□□ -0.08
SMARCD3-202ENST00000356800 CCDC144NLQ6NUI1 221 aa14.57□□□□□ -0.08
SMARCD3-202ENST00000356800 PUSL1Q8N0Z8 303 aaKnown RBP14.57□□□□□ -0.08
SMARCD3-202ENST00000356800 STOML3Q8TAV4 291 aa14.57□□□□□ -0.08
SMARCD3-202ENST00000356800 ZNF471Q9BX82 626 aaPredicted RBP14.57□□□□□ -0.08
SMARCD3-202ENST00000356800 CYTL1Q9NRR1 136 aa14.57□□□□□ -0.08
SMARCD3-202ENST00000356800 FAM24AA6NFZ4 105 aa14.56□□□□□ -0.08
SMARCD3-202ENST00000356800 CD24P25063 80 aa14.56□□□□□ -0.08
SMARCD3-202ENST00000356800 CNTFRP26992 372 aa14.56□□□□□ -0.08
SMARCD3-202ENST00000356800 EWSR1Q01844 656 aaKnown RBP eCLIP14.56□□□□□ -0.08
SMARCD3-202ENST00000356800 CYB5R2Q6BCY4 276 aa14.56□□□□□ -0.08
SMARCD3-202ENST00000356800 TMEM252Q8N6L7 170 aa14.56□□□□□ -0.08
SMARCD3-202ENST00000356800 QTRT1Q9BXR0 403 aaKnown RBP14.56□□□□□ -0.08
SMARCD3-202ENST00000356800 RBKSQ9H477 322 aa14.56□□□□□ -0.08
SMARCD3-202ENST00000356800 BET1LQ9NYM9 111 aa14.56□□□□□ -0.08
SMARCD3-202ENST00000356800 FOXA2Q9Y261 457 aaPredicted RBP14.56□□□□□ -0.08
SMARCD3-202ENST00000356800 CSPG4Q6UVK1 2322 aa14.56□□□□□ -0.08
SMARCD3-202ENST00000356800 IGSF23A1L1A6 192 aa14.55□□□□□ -0.08
SMARCD3-202ENST00000356800 C15orf61A6NNL5 157 aa14.55□□□□□ -0.08
SMARCD3-202ENST00000356800 UPK2O00526 184 aa14.55□□□□□ -0.08
SMARCD3-202ENST00000356800 LY86O95711 162 aa14.55□□□□□ -0.08
SMARCD3-202ENST00000356800 SPCS3P61009 180 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms