RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 AWAT1Q58HT5 328 aa12.65□□□□□ -0.38
FDPS-201ENST00000356657 GLYATL2Q8WU03 294 aa12.65□□□□□ -0.38
FDPS-201ENST00000356657 RBPMSQ93062 196 aaKnown RBP12.65□□□□□ -0.38
FDPS-201ENST00000356657 TMEM68Q96MH6 324 aa12.65□□□□□ -0.38
FDPS-201ENST00000356657 TMEM56Q96MV1 263 aa12.65□□□□□ -0.38
FDPS-201ENST00000356657 WNT10AQ9GZT5 417 aa12.65□□□□□ -0.38
FDPS-201ENST00000356657 C20orf85Q9H1P6 137 aa12.65□□□□□ -0.38
FDPS-201ENST00000356657 TMEM56-RWDD3S4R434 201 aa12.65□□□□□ -0.38
FDPS-201ENST00000356657 DUXBA0A1W2PPF3 345 aa12.64□□□□□ -0.39
FDPS-201ENST00000356657 CA2P00918 260 aa12.64□□□□□ -0.39
FDPS-201ENST00000356657 IL6RP08887 468 aaPredicted RBP12.64□□□□□ -0.39
FDPS-201ENST00000356657 MDKP21741 143 aaPredicted RBP12.64□□□□□ -0.39
FDPS-201ENST00000356657 PROK1P58294 105 aa12.64□□□□□ -0.39
FDPS-201ENST00000356657 RPL8P62917 257 aaKnown RBP12.64□□□□□ -0.39
FDPS-201ENST00000356657 SLC35B1P78383 322 aa12.64□□□□□ -0.39
FDPS-201ENST00000356657 CX3CL1P78423 397 aa12.64□□□□□ -0.39
FDPS-201ENST00000356657 IFITM3Q01628 133 aa12.64□□□□□ -0.39
FDPS-201ENST00000356657 TMEM267Q0VDI3 215 aaPredicted RBP12.64□□□□□ -0.39
FDPS-201ENST00000356657 C12orf54Q6X4T0 127 aa12.64□□□□□ -0.39
FDPS-201ENST00000356657 COMMD1Q8N668 190 aa12.64□□□□□ -0.39
FDPS-201ENST00000356657 ADAD2Q8NCV1 583 aaKnown RBP12.64□□□□□ -0.39
FDPS-201ENST00000356657 SEC22AQ96IW7 307 aa12.64□□□□□ -0.39
FDPS-201ENST00000356657 TMEM140Q9NV12 185 aa12.64□□□□□ -0.39
FDPS-201ENST00000356657 CACFD1Q9UGQ2 172 aa12.64□□□□□ -0.39
FDPS-201ENST00000356657 NUBP2Q9Y5Y2 271 aa12.64□□□□□ -0.39
FDPS-201ENST00000356657 CNIH1O95406 144 aa12.63□□□□□ -0.39
FDPS-201ENST00000356657 KRASP01116 189 aa12.63□□□□□ -0.39
FDPS-201ENST00000356657 MECP2P51608 486 aaKnown RBP12.63□□□□□ -0.39
FDPS-201ENST00000356657 AKR1C2P52895 323 aa12.63□□□□□ -0.39
FDPS-201ENST00000356657 SUPT4H1P63272 117 aaKnown RBP12.63□□□□□ -0.39
FDPS-201ENST00000356657 THOC7Q6I9Y2 204 aaKnown RBP12.63□□□□□ -0.39
FDPS-201ENST00000356657 H2BFWTQ7Z2G1 175 aa12.63□□□□□ -0.39
FDPS-201ENST00000356657 DUSP18Q8NEJ0 188 aa12.63□□□□□ -0.39
FDPS-201ENST00000356657 ARPC1AQ92747 370 aa12.63□□□□□ -0.39
FDPS-201ENST00000356657 RRNAD1Q96FB5 475 aaKnown RBP12.63□□□□□ -0.39
FDPS-201ENST00000356657 HSPB9Q9BQS6 159 aa12.63□□□□□ -0.39
FDPS-201ENST00000356657 ZNF430Q9H8G1 570 aaPredicted RBP12.63□□□□□ -0.39
FDPS-201ENST00000356657 NUDT15Q9NV35 164 aa12.63□□□□□ -0.39
FDPS-201ENST00000356657 FKBP11Q9NYL4 201 aa12.63□□□□□ -0.39
FDPS-201ENST00000356657 HAX1O00165 279 aa12.62□□□□□ -0.39
FDPS-201ENST00000356657 ARPC1BO15143 372 aaKnown RBP12.62□□□□□ -0.39
FDPS-201ENST00000356657 SNAPC5O75971 98 aa12.62□□□□□ -0.39
FDPS-201ENST00000356657 VDAC1P21796 283 aa12.62□□□□□ -0.39
FDPS-201ENST00000356657 VAMP1P23763 118 aa12.62□□□□□ -0.39
FDPS-201ENST00000356657 RAB25P57735 213 aa12.62□□□□□ -0.39
FDPS-201ENST00000356657 TMEM187Q14656 261 aa12.62□□□□□ -0.39
FDPS-201ENST00000356657 FXYD3Q14802 87 aa12.62□□□□□ -0.39
FDPS-201ENST00000356657 AKIRIN2Q53H80 203 aa12.62□□□□□ -0.39
FDPS-201ENST00000356657 Q6ZS46 218 aa12.62□□□□□ -0.39
FDPS-201ENST00000356657 SSX9Q7RTT3 188 aa12.62□□□□□ -0.39
FDPS-201ENST00000356657 ZNF695Q8IW36 515 aa12.62□□□□□ -0.39
FDPS-201ENST00000356657 VKORC1L1Q8N0U8 176 aa12.62□□□□□ -0.39
FDPS-201ENST00000356657 LGI3Q8N145 548 aa12.62□□□□□ -0.39
FDPS-201ENST00000356657 STPG2Q8N412 459 aa12.62□□□□□ -0.39
FDPS-201ENST00000356657 SGMS2Q8NHU3 365 aa12.62□□□□□ -0.39
FDPS-201ENST00000356657 RBMXL1Q96E39 390 aaKnown RBP12.62□□□□□ -0.39
FDPS-201ENST00000356657 SPIN2AQ99865 258 aa12.62□□□□□ -0.39
FDPS-201ENST00000356657 SPIN2BQ9BPZ2 258 aa12.62□□□□□ -0.39
FDPS-201ENST00000356657 TPSG1Q9NRR2 321 aa12.62□□□□□ -0.39
FDPS-201ENST00000356657 PRNDQ9UKY0 176 aa12.62□□□□□ -0.39
FDPS-201ENST00000356657 TENM1Q9UKZ4 2725 aa12.62□□□□□ -0.39
FDPS-201ENST00000356657 A0A0B4J2A0 478 aa12.61□□□□□ -0.39
FDPS-201ENST00000356657 SH2D7A6NKC9 451 aaPredicted RBP12.61□□□□□ -0.39
FDPS-201ENST00000356657 UPK2O00526 184 aa12.61□□□□□ -0.39
FDPS-201ENST00000356657 SFT2D2O95562 160 aa12.61□□□□□ -0.39
FDPS-201ENST00000356657 HLA-GP17693 338 aa12.61□□□□□ -0.39
FDPS-201ENST00000356657 G6PCP35575 357 aa12.61□□□□□ -0.39
FDPS-201ENST00000356657 DCTN2Q13561 401 aaKnown RBP12.61□□□□□ -0.39
FDPS-201ENST00000356657 PLET1Q6UQ28 207 aa12.61□□□□□ -0.39
FDPS-201ENST00000356657 KLHDC1Q8N7A1 406 aa12.61□□□□□ -0.39
FDPS-201ENST00000356657 LRTM2Q8N967 370 aa12.61□□□□□ -0.39
FDPS-201ENST00000356657 WFDC12Q8WWY7 111 aa12.61□□□□□ -0.39
FDPS-201ENST00000356657 LSM10Q969L4 123 aaKnown RBP12.61□□□□□ -0.39
FDPS-201ENST00000356657 SRSF8Q9BRL6 282 aaKnown RBP12.61□□□□□ -0.39
FDPS-201ENST00000356657 COMMD5Q9GZQ3 224 aa12.61□□□□□ -0.39
FDPS-201ENST00000356657 PARP11Q9NR21 331 aa12.61□□□□□ -0.39
FDPS-201ENST00000356657 SHPKQ9UHJ6 478 aa12.61□□□□□ -0.39
FDPS-201ENST00000356657 PSMB11A5LHX3 300 aa12.6□□□□□ -0.39
FDPS-201ENST00000356657 FCN1O00602 326 aa12.6□□□□□ -0.39
FDPS-201ENST00000356657 ATP6V0E1O15342 81 aa12.6□□□□□ -0.39
FDPS-201ENST00000356657 DUS4LO95620 317 aaKnown RBP12.6□□□□□ -0.39
FDPS-201ENST00000356657 PTTG1O95997 202 aa12.6□□□□□ -0.39
FDPS-201ENST00000356657 IGKV1-39P01597 117 aa12.6□□□□□ -0.39
FDPS-201ENST00000356657 HLA-AP01891 365 aaKnown RBP12.6□□□□□ -0.39
FDPS-201ENST00000356657 IGKV1D-39P04432 117 aa12.6□□□□□ -0.39
FDPS-201ENST00000356657 OR4E1P0C645 316 aa12.6□□□□□ -0.39
FDPS-201ENST00000356657 PPP1R1AQ13522 171 aa12.6□□□□□ -0.39
FDPS-201ENST00000356657 TNXAQ16473 311 aa12.6□□□□□ -0.39
FDPS-201ENST00000356657 SP6Q3SY56 376 aa12.6□□□□□ -0.39
FDPS-201ENST00000356657 C4orf46Q504U0 113 aa12.6□□□□□ -0.39
FDPS-201ENST00000356657 HSD17B13Q7Z5P4 300 aaPredicted RBP12.6□□□□□ -0.39
FDPS-201ENST00000356657 OR5B3Q8NH48 314 aa12.6□□□□□ -0.39
FDPS-201ENST00000356657 RNASE11Q8TAA1 199 aaKnown RBP12.6□□□□□ -0.39
FDPS-201ENST00000356657 ABHD5Q8WTS1 349 aa12.6□□□□□ -0.39
FDPS-201ENST00000356657 SRSF12Q8WXF0 261 aaKnown RBP12.6□□□□□ -0.39
FDPS-201ENST00000356657 CLCC1Q96S66 551 aa12.6□□□□□ -0.39
FDPS-201ENST00000356657 ZNF257Q9Y2Q1 563 aa12.6□□□□□ -0.39
FDPS-201ENST00000356657 C15orf61A6NNL5 157 aa12.59□□□□□ -0.39
FDPS-201ENST00000356657 H2AFB2P0C5Z0 115 aa12.59□□□□□ -0.39
FDPS-201ENST00000356657 P0C879 139 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms