RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 IFI27L2Q9H2X8 130 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 SEMA5BQ9P283 1151 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 MYOD1P15172 320 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 HOXA5P20719 270 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 GLIPR1P48060 266 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 RND3P61587 244 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 CD200R1LQ6Q8B3 271 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 TEX45Q8NA69 505 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 FAM57AQ8TBR7 257 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 RNASEH2CQ8TDP1 164 aaKnown RBP5.51□□□□□ -1.53
UPF2-201ENST00000356352 AICDAQ9GZX7 198 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 C1QTNF9BB2RNN3 333 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 C2orf68Q2NKX9 166 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 ZNF385CQ66K41 422 aaPredicted RBP5.5□□□□□ -1.53
UPF2-201ENST00000356352 ZNF660Q6AZW8 331 aaPredicted RBP5.5□□□□□ -1.53
UPF2-201ENST00000356352 PPP1R27Q86WC6 154 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 DRAM1Q8N682 238 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 ZNF418Q8TF45 676 aaPredicted RBP5.5□□□□□ -1.53
UPF2-201ENST00000356352 NPIPB3Q92617 1050 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 REG1AP05451 166 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 IL6RP08887 468 aaPredicted RBP5.5□□□□□ -1.53
UPF2-201ENST00000356352 SMIM10L1P0DMW3 83 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 CSRP2Q16527 193 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 ACSF3Q4G176 576 aaPredicted RBP5.5□□□□□ -1.53
UPF2-201ENST00000356352 ACP7Q6ZNF0 438 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 CIARTQ8N365 385 aaPredicted RBP5.5□□□□□ -1.53
UPF2-201ENST00000356352 ARPC1AQ92747 370 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 SMIM10Q96HG1 83 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 PEF1Q9UBV8 284 aaKnown RBP5.5□□□□□ -1.53
UPF2-201ENST00000356352 COLQQ9Y215 455 aaPredicted RBP5.5□□□□□ -1.53
UPF2-201ENST00000356352 TGIF2-C20orf24A0A0A6YYL0 155 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 IGKV3OR2-268A0A0C4DH90 116 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 TMEM14DPA8MWL7 114 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 NMBP08949 121 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 CNTFRP26992 372 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 CENPWQ5EE01 88 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 ZNF506Q5JVG8 444 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 CDCP2Q5VXM1 449 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 LEMD1Q68G75 181 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 POC1AQ8NBT0 407 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 FAM131CQ96AQ9 280 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 KCNS1Q96KK3 526 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 C5orf66Q9H5L9 145 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 ZNF815PA8K554 130 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 KLK2P20151 261 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 FUT5Q11128 374 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 TTC9CQ8N5M4 171 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 ARL6IP6Q8N6S5 226 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 FBLIM1Q8WUP2 373 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 FAM168AQ92567 244 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 FBXL7Q9UJT9 491 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 TAF1P21675 1872 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 C19orf67A6NJJ6 358 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 RRHO14718 337 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 MOSP00540 346 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 EIF4EBP2Q13542 120 aaPredicted RBP5.5□□□□□ -1.53
UPF2-201ENST00000356352 TMEM170BQ5T4T1 132 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 OR11H4Q8NGC9 324 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 CACNG8Q8WXS5 425 aa5.5□□□□□ -1.53
UPF2-201ENST00000356352 MRPS18CQ9Y3D5 142 aaKnown RBP5.5□□□□□ -1.53
UPF2-201ENST00000356352 ZNF98A6NK75 572 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 SLC25A20O43772 301 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 DTX2Q86UW9 622 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 ZIC4Q8N9L1 334 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 SLC25A38Q96DW6 304 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 AMELYQ99218 206 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 TM2D1Q9BX74 207 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 ZNF703Q9H7S9 590 aaPredicted RBP5.49□□□□□ -1.53
UPF2-201ENST00000356352 PGPEP1Q9NXJ5 209 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 C21orf62Q9NYP8 219 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 CDK5RAP2Q96SN8 1893 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 CMC4P56277 68 aaPredicted RBP5.49□□□□□ -1.53
UPF2-201ENST00000356352 SCGB3A1Q96QR1 104 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 SLC50A1Q9BRV3 221 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 NPCDR1Q9BY65 106 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 KLK15Q9H2R5 256 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 MRPL16Q9NX20 251 aaKnown RBP5.49□□□□□ -1.53
UPF2-201ENST00000356352 IL36BQ9NZH7 164 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 F11RQ9Y624 299 aaKnown RBP5.49□□□□□ -1.53
UPF2-201ENST00000356352 DUSP14O95147 198 aaKnown RBP5.49□□□□□ -1.53
UPF2-201ENST00000356352 ASPHD2Q6ICH7 369 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 ITLN2Q8WWU7 325 aaPredicted RBP5.49□□□□□ -1.53
UPF2-201ENST00000356352 CTHRC1Q96CG8 243 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 RPRMQ9NS64 109 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 TRAV24A0A0B4J272 114 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 C9JCJ5 164 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 H0YL77 283 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 SMAD7O15105 426 aaKnown RBP5.49□□□□□ -1.53
UPF2-201ENST00000356352 EFEMP2O95967 443 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 ICAM4Q14773 271 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 WDR82Q6UXN9 313 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 PUSL1Q8N0Z8 303 aaKnown RBP5.49□□□□□ -1.53
UPF2-201ENST00000356352 APCDD1LQ8NCL9 501 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 NPFFR1Q9GZQ6 430 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 YAE1D1Q9NRH1 226 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 LINC00312Q9Y6C7 94 aa5.49□□□□□ -1.53
UPF2-201ENST00000356352 KBTBD11-OT1A0A1B0GTJ5 212 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 LOC101059948A0A1B0GTJ6 334 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 PSMB11A5LHX3 300 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 PEX7O00628 323 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms