RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 BOKQ9UMX3 212 aaPredicted RBP8.44□□□□□ -1.06
PTPRA-203ENST00000356147 PCSK5Q92824 1860 aa8.44□□□□□ -1.06
PTPRA-203ENST00000356147 IGKV3D-15A0A087WSY6 115 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 LYZL6O75951 148 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 MPV17P39210 176 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 PRAMEF5Q5TYX0 476 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 TREML4Q6UXN2 200 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 DOLPP1Q86YN1 238 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 PKIBQ9C010 78 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 TMEM30CPA0ZSE6 113 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 TPPP2P59282 170 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 FOXL1Q12952 345 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 RPL39P5Q59GN2 51 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 MOB1BQ7L9L4 216 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 FAM19A2Q8N3H0 131 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 TMEM251Q8N6I4 163 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 OR5AU1Q8NGC0 362 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 LRFN3Q9BTN0 628 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 TTTY12Q9BZ98 90 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 WNT10AQ9GZT5 417 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 RNASE7Q9H1E1 156 aaKnown RBP8.43□□□□□ -1.06
PTPRA-203ENST00000356147 WDR83OSQ9Y284 106 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 ROS1P08922 2347 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 AHRRA9YTQ3 701 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 TCF21O43680 179 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 YPEL1O60688 119 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 ERVK11-1P61568 191 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 FOXF2Q12947 444 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 TRA2AQ13595 282 aaKnown RBP eCLIP8.43□□□□□ -1.06
PTPRA-203ENST00000356147 ST6GALNAC3Q8NDV1 305 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 RCHY1Q96PM5 261 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 YPEL2Q96QA6 119 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 LINC00470Q9BZP3 86 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 KCNIP2Q9NS61 270 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 WIPI2Q9Y4P8 454 aa8.43□□□□□ -1.06
PTPRA-203ENST00000356147 TET2Q6N021 2002 aaPredicted RBP8.42□□□□□ -1.06
PTPRA-203ENST00000356147 PIGBOS1A0A0B4J2F0 54 aa8.42□□□□□ -1.06
PTPRA-203ENST00000356147 TMPRSS2O15393 492 aa8.42□□□□□ -1.06
PTPRA-203ENST00000356147 PROP1O75360 226 aa8.42□□□□□ -1.06
PTPRA-203ENST00000356147 AGFG2O95081 481 aa8.42□□□□□ -1.06
PTPRA-203ENST00000356147 CA1P00915 261 aaPredicted RBP8.42□□□□□ -1.06
PTPRA-203ENST00000356147 CGAP01215 116 aa8.42□□□□□ -1.06
PTPRA-203ENST00000356147 GATA2P23769 480 aaPredicted RBP8.42□□□□□ -1.06
PTPRA-203ENST00000356147 MAJINQ3KP22 176 aa8.42□□□□□ -1.06
PTPRA-203ENST00000356147 MRPL54Q6P161 138 aaKnown RBP8.42□□□□□ -1.06
PTPRA-203ENST00000356147 NHLRC2Q8NBF2 726 aa8.42□□□□□ -1.06
PTPRA-203ENST00000356147 Q8TCH9 128 aa8.42□□□□□ -1.06
PTPRA-203ENST00000356147 UHRF2Q96PU4 802 aa8.42□□□□□ -1.06
PTPRA-203ENST00000356147 MIEN1Q9BRT3 115 aa8.42□□□□□ -1.06
PTPRA-203ENST00000356147 TUBG2Q9NRH3 451 aa8.42□□□□□ -1.06
PTPRA-203ENST00000356147 LAMA5O15230 3695 aa8.42□□□□□ -1.06
PTPRA-203ENST00000356147 TNFSF13O75888 250 aa8.42□□□□□ -1.06
PTPRA-203ENST00000356147 OR1C1Q15619 314 aa8.42□□□□□ -1.06
PTPRA-203ENST00000356147 MOB3BQ86TA1 216 aa8.42□□□□□ -1.06
PTPRA-203ENST00000356147 OR4P4Q8NGL7 312 aa8.42□□□□□ -1.06
PTPRA-203ENST00000356147 GGTLC1Q9BX51 225 aa8.42□□□□□ -1.06
PTPRA-203ENST00000356147 GNB4Q9HAV0 340 aa8.42□□□□□ -1.06
PTPRA-203ENST00000356147 POLDIP2Q9Y2S7 368 aa8.42□□□□□ -1.06
PTPRA-203ENST00000356147 HEATR1Q9H583 2144 aaKnown RBP8.41□□□□□ -1.06
PTPRA-203ENST00000356147 RAB29O14966 203 aa8.41□□□□□ -1.06
PTPRA-203ENST00000356147 NTF3P20783 257 aa8.41□□□□□ -1.06
PTPRA-203ENST00000356147 AMTP48728 403 aa8.41□□□□□ -1.06
PTPRA-203ENST00000356147 COMPP49747 757 aaPredicted RBP8.41□□□□□ -1.06
PTPRA-203ENST00000356147 FABP6P51161 128 aa8.41□□□□□ -1.06
PTPRA-203ENST00000356147 NRN1LQ496H8 165 aa8.41□□□□□ -1.06
PTPRA-203ENST00000356147 ABHD17BQ5VST6 288 aa8.41□□□□□ -1.06
PTPRA-203ENST00000356147 NAT8BQ9UHF3 227 aa8.41□□□□□ -1.06
PTPRA-203ENST00000356147 KMT2EQ8IZD2 1858 aa8.41□□□□□ -1.06
PTPRA-203ENST00000356147 CEP250Q9BV73 2442 aa8.41□□□□□ -1.06
PTPRA-203ENST00000356147 M0R1X1 148 aa8.41□□□□□ -1.06
PTPRA-203ENST00000356147 ZNF146Q15072 292 aa8.41□□□□□ -1.06
PTPRA-203ENST00000356147 TMEM183BQ1AE95 376 aa8.41□□□□□ -1.06
PTPRA-203ENST00000356147 MMD2Q8IY49 270 aa8.41□□□□□ -1.06
PTPRA-203ENST00000356147 C11orf42Q8N5U0 333 aa8.41□□□□□ -1.06
PTPRA-203ENST00000356147 OR4A16Q8NH70 328 aa8.41□□□□□ -1.06
PTPRA-203ENST00000356147 FAM216AQ8WUB2 273 aa8.41□□□□□ -1.06
PTPRA-203ENST00000356147 CIB3Q96Q77 187 aaPredicted RBP8.41□□□□□ -1.06
PTPRA-203ENST00000356147 GNG12Q9UBI6 72 aa8.41□□□□□ -1.06
PTPRA-203ENST00000356147 TBL2Q9Y4P3 447 aaKnown RBP8.41□□□□□ -1.06
PTPRA-203ENST00000356147 SIAH2O43255 324 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 SMPD2O60906 423 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 ARG2P78540 354 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 HTD2P86397 168 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 EIF4EBP1Q13541 118 aaPredicted RBP8.4□□□□□ -1.06
PTPRA-203ENST00000356147 LCN12Q6JVE5 192 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 TEX43Q6ZNM6 134 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 ERASQ7Z444 233 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 SIGLECL1Q8N7X8 197 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 GCM1Q9NP62 436 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 PILRBQ9UKJ0 227 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 SIT1Q9Y3P8 196 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 TNRC6BQ9UPQ9 1833 aaKnown RBP8.4□□□□□ -1.06
PTPRA-203ENST00000356147 ABCA1O95477 2261 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 DIRC3C9JPN6 131 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 OR10J4P0C629 311 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 STAG3L2P0CL84 134 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 STAG3L3P0CL85 134 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 CRYBB3P26998 211 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 YPEL3P61236 119 aaPredicted RBP8.4□□□□□ -1.06
PTPRA-203ENST00000356147 TBC1D28Q2M2D7 210 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms