RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 BCL2L11O43521 198 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 GPR137BO60478 399 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 IL6RP08887 468 aaPredicted RBP10.99□□□□□ -0.65
HOXA1-202ENST00000355633 IAPPP10997 89 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 RPL23AP62750 156 aaKnown RBP10.99□□□□□ -0.65
HOXA1-202ENST00000355633 SSX2Q16385 188 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 AARDQ4LEZ3 155 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 GPR157Q5UAW9 335 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 CCDC144NLQ6NUI1 221 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 PUSL1Q8N0Z8 303 aaKnown RBP10.99□□□□□ -0.65
HOXA1-202ENST00000355633 LINC01356Q8N9X3 169 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 Q96MF0 132 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 REG4Q9BYZ8 158 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 RBKSQ9H477 322 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 LYRM2Q9NU23 88 aaPredicted RBP10.99□□□□□ -0.65
HOXA1-202ENST00000355633 HIF1ANQ9NWT6 349 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 BET1LQ9NYM9 111 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 AUP1Q9Y679 476 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 FAM24AA6NFZ4 105 aa10.98□□□□□ -0.65
HOXA1-202ENST00000355633 C15orf61A6NNL5 157 aa10.98□□□□□ -0.65
HOXA1-202ENST00000355633 OOSP1A8MZH6 123 aa10.98□□□□□ -0.65
HOXA1-202ENST00000355633 UPK2O00526 184 aa10.98□□□□□ -0.65
HOXA1-202ENST00000355633 IFNA17P01571 189 aa10.98□□□□□ -0.65
HOXA1-202ENST00000355633 FOSL1P15407 271 aa10.98□□□□□ -0.65
HOXA1-202ENST00000355633 LGALS7P47929 136 aa10.98□□□□□ -0.65
HOXA1-202ENST00000355633 PAX9P55771 341 aa10.98□□□□□ -0.65
HOXA1-202ENST00000355633 ZNF429Q86V71 674 aa10.98□□□□□ -0.65
HOXA1-202ENST00000355633 KRTAP1-3Q8IUG1 177 aa10.98□□□□□ -0.65
HOXA1-202ENST00000355633 VSTM2AQ8TAG5 236 aa10.98□□□□□ -0.65
HOXA1-202ENST00000355633 CACFD1Q9UGQ2 172 aa10.98□□□□□ -0.65
HOXA1-202ENST00000355633 WSB1Q9Y6I7 421 aa10.98□□□□□ -0.65
HOXA1-202ENST00000355633 CSMD2Q7Z408 3487 aa10.98□□□□□ -0.65
HOXA1-202ENST00000355633 CENPVL3A0A0U1RRI6 287 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 IGLV2-23P01705 113 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 GATA3P23771 443 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 VMA21Q3ZAQ7 101 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 MAPK1IP1LQ8NDC0 245 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 OR52E5Q8NH55 327 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 SMIM8Q96KF7 97 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 SLC25A31Q9H0C2 315 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 PSENENQ9NZ42 101 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 NUP50Q9UKX7 468 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 PRNDQ9UKY0 176 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 FOXA2Q9Y261 457 aaPredicted RBP10.97□□□□□ -0.65
HOXA1-202ENST00000355633 ASH1LQ9NR48 2969 aaKnown RBP10.97□□□□□ -0.65
HOXA1-202ENST00000355633 CEBPZOSA8MTT3 80 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 H3BP45 60 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 NPFFO15130 113 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 KBTBD11O94819 623 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 PAX6P26367 422 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 CD1BP29016 333 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 SAA4P35542 130 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 TAS2R30P59541 319 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 SPCS3P61009 180 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 EWSR1Q01844 656 aaKnown RBP eCLIP10.97□□□□□ -0.65
HOXA1-202ENST00000355633 HABP2Q14520 560 aaPredicted RBP10.97□□□□□ -0.65
HOXA1-202ENST00000355633 SPINK9Q5DT21 86 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 TMEM252Q8N6L7 170 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 OR8H1Q8NGG4 311 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 DTD1Q8TEA8 209 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 CFHR4Q92496 578 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 ZDHHC16Q969W1 377 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 MALSU1Q96EH3 234 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 RITA1Q96K30 269 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 C7orf69Q9H7B7 122 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 TMEM14BQ9NUH8 114 aa10.97□□□□□ -0.65
HOXA1-202ENST00000355633 IGSF23A1L1A6 192 aa10.96□□□□□ -0.65
HOXA1-202ENST00000355633 VENTXO95231 258 aa10.96□□□□□ -0.65
HOXA1-202ENST00000355633 CLEC9AQ6UXN8 241 aa10.96□□□□□ -0.65
HOXA1-202ENST00000355633 DYNAPQ8N1N2 210 aa10.96□□□□□ -0.65
HOXA1-202ENST00000355633 OR4A5Q8NH83 315 aa10.96□□□□□ -0.65
HOXA1-202ENST00000355633 CIB3Q96Q77 187 aaPredicted RBP10.96□□□□□ -0.65
HOXA1-202ENST00000355633 ZNF471Q9BX82 626 aaPredicted RBP10.96□□□□□ -0.65
HOXA1-202ENST00000355633 TET2Q6N021 2002 aaPredicted RBP10.96□□□□□ -0.66
HOXA1-202ENST00000355633 TRAV40A0A0B4J280 105 aa10.96□□□□□ -0.66
HOXA1-202ENST00000355633 TAAR5O14804 337 aa10.96□□□□□ -0.66
HOXA1-202ENST00000355633 SLC25A17O43808 307 aa10.96□□□□□ -0.66
HOXA1-202ENST00000355633 NHLH2Q02577 135 aa10.96□□□□□ -0.66
HOXA1-202ENST00000355633 PDLIM3Q53GG5 364 aaPredicted RBP10.96□□□□□ -0.66
HOXA1-202ENST00000355633 TEX261Q6UWH6 196 aa10.96□□□□□ -0.66
HOXA1-202ENST00000355633 TMEM167AQ8TBQ9 72 aa10.96□□□□□ -0.66
HOXA1-202ENST00000355633 TSNAXQ99598 290 aaKnown RBP10.96□□□□□ -0.66
HOXA1-202ENST00000355633 RNF5Q99942 180 aa10.96□□□□□ -0.66
HOXA1-202ENST00000355633 FKBP11Q9NYL4 201 aa10.96□□□□□ -0.66
HOXA1-202ENST00000355633 FBXL17Q9UF56 701 aa10.96□□□□□ -0.66
HOXA1-202ENST00000355633 TCF19Q9Y242 345 aa10.96□□□□□ -0.66
HOXA1-202ENST00000355633 OR51B2Q9Y5P1 312 aa10.96□□□□□ -0.66
HOXA1-202ENST00000355633 U3KQ87 197 aa10.96□□□□□ -0.66
HOXA1-202ENST00000355633 POLQO75417 2590 aa10.96□□□□□ -0.66
HOXA1-202ENST00000355633 IGHV1-69DA0A0B4J2H0 117 aa10.95□□□□□ -0.66
HOXA1-202ENST00000355633 SPDEFO95238 335 aa10.95□□□□□ -0.66
HOXA1-202ENST00000355633 IGHV1-69P01742 117 aa10.95□□□□□ -0.66
HOXA1-202ENST00000355633 HSPE1P61604 102 aaKnown RBP10.95□□□□□ -0.66
HOXA1-202ENST00000355633 RPL8P62917 257 aaKnown RBP10.95□□□□□ -0.66
HOXA1-202ENST00000355633 BAXQ07812 192 aa10.95□□□□□ -0.66
HOXA1-202ENST00000355633 SPANXN5Q5MJ07 72 aa10.95□□□□□ -0.66
HOXA1-202ENST00000355633 PIP4P2Q8N4L2 257 aa10.95□□□□□ -0.66
HOXA1-202ENST00000355633 SMIM3Q9BZL3 60 aa10.95□□□□□ -0.66
HOXA1-202ENST00000355633 ZNF257Q9Y2Q1 563 aa10.95□□□□□ -0.66
HOXA1-202ENST00000355633 CR1P17927 2039 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms