RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 IGHV1-69-2A0A0G2JMI3 117 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 CRPP02741 224 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 PEF1Q9UBV8 284 aaKnown RBP4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 MPDZO75970 2070 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 IGHV1-45A0A0A0MS14 117 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 MOSP00540 346 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 CENPWQ5EE01 88 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 ZNF721Q8TF20 911 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 MARCH11A6NNE9 402 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 ZIC3O60481 467 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 ZP4Q12836 540 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 ZNHIT1O43257 154 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 PROB1E7EW31 1015 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 SFXN3Q9BWM7 321 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 SNAI3Q3KNW1 292 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 SHANK1Q9Y566 2161 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 GRIFINA4D1Z8 144 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 PTGDSP41222 190 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 TMEM42Q69YG0 159 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 IGHV3OR16-13A0A075B7E8 117 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 IGHV3-74A0A0B4J1X5 117 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 PNKDQ8N490 385 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 MRPL32Q9BYC8 188 aaKnown RBP4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 C5P01031 1676 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 A0A0J9YW62 118 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 ISXQ2M1V0 245 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 SSC4DQ8WTU2 575 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 JPT1Q9UK76 154 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 NPIPB8E9PQR5 432 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 NPIPB9F8W1W9 429 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 PEX7O00628 323 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 NPIPB7O75200 414 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 TOGARAM1Q9Y4F4 1720 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 FAM27BQ5VT28 67 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 GPR146Q96CH1 333 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 PCNX1Q96RV3 2341 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 FAM89BQ8N5H3 189 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 NRTNQ99748 197 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 TGFAP01135 160 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 HOXB1P14653 301 aaPredicted RBP4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 SPINT1O43278 529 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 MIXL1Q9H2W2 232 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 OR9G1Q8NH87 305 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 TRAV8-2A0A0B4J237 113 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 C19orf67A6NJJ6 358 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 ICAM4Q14773 271 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 TMEM30BQ3MIR4 351 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 DOCK6Q96HP0 2047 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 CYP2G1PQ6ZSU1 146 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 VCX2Q9H322 139 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 V9GYH0 126 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 FAM90A26D6RGX4 464 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 SAMD13Q5VXD3 122 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 ZAR1Q86SH2 424 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 RNASEH2CQ8TDP1 164 aaKnown RBP4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 TYMSP04818 313 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 TMEM222Q9H0R3 208 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 FREM3P0C091 2139 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 PRSS53Q2L4Q9 553 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 KCNS1Q96KK3 526 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 SH3BGRL3Q9H299 93 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 TDRD15B5MCY1 1934 aaKnown RBP4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 ZNF146Q15072 292 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 SMRP1Q8NCR6 262 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 CITED2Q99967 270 aaPredicted RBP4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 PTP4A3O75365 173 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 IL11P20809 199 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 PEMTQ9UBM1 199 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 B9A039 149 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 SELENOHQ8IZQ5 122 aaKnown RBP4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 NPIPB3Q92617 1050 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 PCOLCEQ15113 449 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 TTC9CQ8N5M4 171 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 MAST2Q6P0Q8 1798 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 A0A1W2PP11 408 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 FOXL2P58012 376 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 SCARF2Q96GP6 870 aaPredicted RBP4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 TGIF2-C20orf24A0A0A6YYL0 155 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 CELA2AP08217 269 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 ZNF250P15622 560 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 DTX2Q86UW9 622 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 LRTM2Q8N967 370 aa4.95□□□□□ -1.62
SRGAP1-201ENST00000355086 KLF14Q8TD94 323 aaPredicted RBP4.94□□□□□ -1.62
SRGAP1-201ENST00000355086 HIST1H2BAQ96A08 127 aa4.94□□□□□ -1.62
SRGAP1-201ENST00000355086 PAX2Q02962 417 aa4.94□□□□□ -1.62
SRGAP1-201ENST00000355086 GFRA3O60609 400 aa4.94□□□□□ -1.62
SRGAP1-201ENST00000355086 IGHV4-39P01824 125 aa4.94□□□□□ -1.62
SRGAP1-201ENST00000355086 BTAF1O14981 1849 aa4.94□□□□□ -1.62
SRGAP1-201ENST00000355086 PAX1P15863 534 aa4.94□□□□□ -1.62
SRGAP1-201ENST00000355086 LRRK1Q38SD2 2015 aa4.94□□□□□ -1.62
SRGAP1-201ENST00000355086 PLSCR2Q9NRY7 297 aa4.94□□□□□ -1.62
SRGAP1-201ENST00000355086 NBASA2RRP1 2371 aa4.94□□□□□ -1.62
SRGAP1-201ENST00000355086 DPRXA6NFQ7 191 aa4.94□□□□□ -1.62
SRGAP1-201ENST00000355086 UBE2DNLQ8IWF7 75 aa4.94□□□□□ -1.62
SRGAP1-201ENST00000355086 RNF182Q8N6D2 247 aa4.94□□□□□ -1.62
SRGAP1-201ENST00000355086 CXorf65A6NEN9 183 aa4.94□□□□□ -1.62
SRGAP1-201ENST00000355086 C1QL1O75973 258 aa4.94□□□□□ -1.62
SRGAP1-201ENST00000355086 LDLRAD2Q5SZI1 272 aa4.94□□□□□ -1.62
SRGAP1-201ENST00000355086 DLL3Q9NYJ7 618 aa4.94□□□□□ -1.62
SRGAP1-201ENST00000355086 EIF3GO75821 320 aaKnown RBP eCLIP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms