RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 OR5M8Q8NGP6 311 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 WDR89Q96FK6 387 aaPredicted RBP8.88□□□□□ -0.99
RTN3-204ENST00000354497 SULT4A1Q9BR01 284 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 SLC25A31Q9H0C2 315 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 OR51I2Q9H344 312 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 COMMD9Q9P000 198 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 STARD9Q9P2P6 4700 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 OR5H14A6NHG9 310 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 FAM90A22PA8MWA6 464 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 TAAR5O14804 337 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 XRCC3O43542 346 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 UCHL1P09936 223 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 H2BFMP0C1H6 154 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 PGA5P0DJD9 388 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 ZNF728P0DKX0 622 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 CHATP28329 748 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 DLX6P56179 175 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 SRSF3P84103 164 aaKnown RBP8.87□□□□□ -0.99
RTN3-204ENST00000354497 GUK1Q16774 197 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 MINOS1Q5TGZ0 78 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.87□□□□□ -0.99
RTN3-204ENST00000354497 FAM24BQ8N5W8 94 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 OR6N2Q8NGY6 317 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 FCAMRQ8WWV6 532 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 AQP3Q92482 292 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 PHB2Q99623 299 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 ATG5Q9H1Y0 275 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 RGCCQ9H4X1 137 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 EGLN3Q9H6Z9 239 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 DNAJC4Q9NNZ3 241 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 SMPXQ9UHP9 88 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 ZNF107Q9UII5 783 aaPredicted RBP8.87□□□□□ -0.99
RTN3-204ENST00000354497 IKZF2Q9UKS7 526 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 FLVCR2Q9UPI3 526 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 MINOS1-NBL1R4GNA1 71 aa8.87□□□□□ -0.99
RTN3-204ENST00000354497 FAM183AA6NL82 134 aa8.86□□□□□ -0.99
RTN3-204ENST00000354497 SULT1A2P50226 295 aa8.86□□□□□ -0.99
RTN3-204ENST00000354497 CDK5Q00535 292 aa8.86□□□□□ -0.99
RTN3-204ENST00000354497 LY6G6FQ5SQ64 297 aa8.86□□□□□ -0.99
RTN3-204ENST00000354497 C9orf66Q5T8R8 295 aa8.86□□□□□ -0.99
RTN3-204ENST00000354497 PLCXD3Q63HM9 321 aa8.86□□□□□ -0.99
RTN3-204ENST00000354497 ETFRF1Q6IPR1 90 aa8.86□□□□□ -0.99
RTN3-204ENST00000354497 PRSS45Q7RTY3 260 aa8.86□□□□□ -0.99
RTN3-204ENST00000354497 NR2C2APQ86WQ0 139 aa8.86□□□□□ -0.99
RTN3-204ENST00000354497 POC1AQ8NBT0 407 aa8.86□□□□□ -0.99
RTN3-204ENST00000354497 INO80EQ8NBZ0 244 aaPredicted RBP8.86□□□□□ -0.99
RTN3-204ENST00000354497 ZNF714Q96N38 554 aa8.86□□□□□ -0.99
RTN3-204ENST00000354497 ABHD6Q9BV23 337 aa8.86□□□□□ -0.99
RTN3-204ENST00000354497 ADGRL4Q9HBW9 690 aa8.86□□□□□ -0.99
RTN3-204ENST00000354497 TMEM242Q9NWH2 141 aa8.86□□□□□ -0.99
RTN3-204ENST00000354497 HSPB7Q9UBY9 170 aa8.86□□□□□ -0.99
RTN3-204ENST00000354497 IGHV2-26A0A0B4J1V2 119 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 CCSO14618 274 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 GOSR2O14653 212 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 SNRNP70P08621 437 aaKnown RBP8.85□□□□□ -0.99
RTN3-204ENST00000354497 SRMP19623 302 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 HTR1DP28221 377 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 OR3A4PP47883 348 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 UBE2V1Q13404 147 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 CRMP1Q14194 572 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 EDDM3AQ14507 147 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 CEACAM21Q3KPI0 293 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 SLC25A26Q70HW3 274 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 COMMD2Q86X83 199 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 SBSPONQ8IVN8 264 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 H1FOOQ8IZA3 346 aaPredicted RBP8.85□□□□□ -0.99
RTN3-204ENST00000354497 JAGN1Q8N5M9 183 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 RNF133Q8WVZ7 376 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 ASB17Q8WXJ9 295 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 GHSRQ92847 366 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 OR8B4Q96RC9 309 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 AMELYQ99218 206 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 P2RX4Q99571 388 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 SLC25A21Q9BQT8 299 aaPredicted RBP8.85□□□□□ -0.99
RTN3-204ENST00000354497 CLEC7AQ9BXN2 247 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 LINC00527Q9UJ94 153 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 SMAD5-AS1Q9Y6J3 95 aa8.85□□□□□ -0.99
RTN3-204ENST00000354497 XKRY2A2RUG3 117 aa8.84□□□□□ -0.99
RTN3-204ENST00000354497 B4DEV8 164 aa8.84□□□□□ -0.99
RTN3-204ENST00000354497 OR2C1O95371 312 aa8.84□□□□□ -0.99
RTN3-204ENST00000354497 HPRT1P00492 218 aa8.84□□□□□ -0.99
RTN3-204ENST00000354497 RBP4P02753 201 aa8.84□□□□□ -0.99
RTN3-204ENST00000354497 RPS10P46783 165 aaKnown RBP8.84□□□□□ -0.99
RTN3-204ENST00000354497 AKR1C2P52895 323 aa8.84□□□□□ -0.99
RTN3-204ENST00000354497 PTTG1IPP53801 180 aa8.84□□□□□ -0.99
RTN3-204ENST00000354497 CYCSP99999 105 aaKnown RBP8.84□□□□□ -0.99
RTN3-204ENST00000354497 AKR1C1Q04828 323 aa8.84□□□□□ -0.99
RTN3-204ENST00000354497 MORN2Q502X0 79 aa8.84□□□□□ -0.99
RTN3-204ENST00000354497 PET117Q6UWS5 81 aa8.84□□□□□ -0.99
RTN3-204ENST00000354497 ZNF695Q8IW36 515 aa8.84□□□□□ -0.99
RTN3-204ENST00000354497 FOXRED2Q8IWF2 684 aa8.84□□□□□ -0.99
RTN3-204ENST00000354497 TNFAIP8L1Q8WVP5 186 aa8.84□□□□□ -0.99
RTN3-204ENST00000354497 THRSPQ92748 146 aa8.84□□□□□ -0.99
RTN3-204ENST00000354497 RAX2Q96IS3 184 aa8.84□□□□□ -0.99
RTN3-204ENST00000354497 TMEM133Q9H2Q1 129 aa8.84□□□□□ -0.99
RTN3-204ENST00000354497 ZMAT4Q9H898 229 aa8.84□□□□□ -0.99
RTN3-204ENST00000354497 FAM212BQ9NTI7 297 aaPredicted RBP8.84□□□□□ -0.99
RTN3-204ENST00000354497 SLC7A11Q9UPY5 501 aa8.84□□□□□ -0.99
RTN3-204ENST00000354497 ZNF256Q9Y2P7 627 aaPredicted RBP8.84□□□□□ -0.99
RTN3-204ENST00000354497 STAB2Q8WWQ8 2551 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms