RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 MS4A7Q9GZW8 240 aaPredicted RBP16.59■□□□□ 0.25
TRIM4-202ENST00000354241 NUP50Q9UKX7 468 aa16.59■□□□□ 0.25
TRIM4-202ENST00000354241 HILPDAQ9Y5L2 63 aa16.59■□□□□ 0.25
TRIM4-202ENST00000354241 TACC2O95359 2948 aa16.59■□□□□ 0.25
TRIM4-202ENST00000354241 C15orf61A6NNL5 157 aa16.58■□□□□ 0.25
TRIM4-202ENST00000354241 ALKAL2Q6UX46 152 aa16.58■□□□□ 0.25
TRIM4-202ENST00000354241 DTD1Q8TEA8 209 aa16.58■□□□□ 0.25
TRIM4-202ENST00000354241 CST7O76096 145 aa16.58■□□□□ 0.24
TRIM4-202ENST00000354241 TMEM267Q0VDI3 215 aaPredicted RBP16.58■□□□□ 0.24
TRIM4-202ENST00000354241 AARDQ4LEZ3 155 aa16.58■□□□□ 0.24
TRIM4-202ENST00000354241 A0A1W2PPI3 338 aa16.57■□□□□ 0.24
TRIM4-202ENST00000354241 UPK2O00526 184 aa16.57■□□□□ 0.24
TRIM4-202ENST00000354241 LGALS4P56470 323 aa16.57■□□□□ 0.24
TRIM4-202ENST00000354241 TAS2R30P59541 319 aa16.57■□□□□ 0.24
TRIM4-202ENST00000354241 SPCS3P61009 180 aa16.57■□□□□ 0.24
TRIM4-202ENST00000354241 SPANXN5Q5MJ07 72 aa16.57■□□□□ 0.24
TRIM4-202ENST00000354241 RPL7L1Q6DKI1 246 aaKnown RBP16.57■□□□□ 0.24
TRIM4-202ENST00000354241 PUSL1Q8N0Z8 303 aaKnown RBP16.57■□□□□ 0.24
TRIM4-202ENST00000354241 OR8H3Q8N146 312 aa16.57■□□□□ 0.24
TRIM4-202ENST00000354241 BET1LQ9NYM9 111 aa16.57■□□□□ 0.24
TRIM4-202ENST00000354241 ANKRD17O75179 2603 aaKnown RBP16.57■□□□□ 0.24
TRIM4-202ENST00000354241 TPT1P13693 172 aaKnown RBP16.57■□□□□ 0.24
TRIM4-202ENST00000354241 ZNF429Q86V71 674 aa16.57■□□□□ 0.24
TRIM4-202ENST00000354241 TMEM217Q8N7C4 229 aa16.57■□□□□ 0.24
TRIM4-202ENST00000354241 OR52E5Q8NH55 327 aa16.57■□□□□ 0.24
TRIM4-202ENST00000354241 RITA1Q96K30 269 aa16.57■□□□□ 0.24
TRIM4-202ENST00000354241 FOXA2Q9Y261 457 aaPredicted RBP16.57■□□□□ 0.24
TRIM4-202ENST00000354241 TIMM23O14925 209 aa16.56■□□□□ 0.24
TRIM4-202ENST00000354241 IL6RP08887 468 aaPredicted RBP16.56■□□□□ 0.24
TRIM4-202ENST00000354241 HTR2BP41595 481 aa16.56■□□□□ 0.24
TRIM4-202ENST00000354241 BAXQ07812 192 aa16.56■□□□□ 0.24
TRIM4-202ENST00000354241 STX12Q86Y82 276 aa16.56■□□□□ 0.24
TRIM4-202ENST00000354241 LRRC75A-AS1Q8N1F1 130 aa16.56■□□□□ 0.24
TRIM4-202ENST00000354241 STOML3Q8TAV4 291 aa16.56■□□□□ 0.24
TRIM4-202ENST00000354241 CIB3Q96Q77 187 aaPredicted RBP16.56■□□□□ 0.24
TRIM4-202ENST00000354241 TMEM14BQ9NUH8 114 aa16.56■□□□□ 0.24
TRIM4-202ENST00000354241 PRNDQ9UKY0 176 aa16.56■□□□□ 0.24
TRIM4-202ENST00000354241 OR51B2Q9Y5P1 312 aa16.56■□□□□ 0.24
TRIM4-202ENST00000354241 KBTBD11O94819 623 aa16.55■□□□□ 0.24
TRIM4-202ENST00000354241 IGLV2-23P01705 113 aa16.55■□□□□ 0.24
TRIM4-202ENST00000354241 MYOD1P15172 320 aa16.55■□□□□ 0.24
TRIM4-202ENST00000354241 PAX6P26367 422 aa16.55■□□□□ 0.24
TRIM4-202ENST00000354241 UBE2E1P51965 193 aa16.55■□□□□ 0.24
TRIM4-202ENST00000354241 PAX8Q06710 450 aa16.55■□□□□ 0.24
TRIM4-202ENST00000354241 WFDC1Q9HC57 220 aa16.55■□□□□ 0.24
TRIM4-202ENST00000354241 CACFD1Q9UGQ2 172 aa16.55■□□□□ 0.24
TRIM4-202ENST00000354241 TCF19Q9Y242 345 aa16.55■□□□□ 0.24
TRIM4-202ENST00000354241 MSMBP08118 114 aa16.55■□□□□ 0.24
TRIM4-202ENST00000354241 METTL15P1P0C7V9 234 aa16.55■□□□□ 0.24
TRIM4-202ENST00000354241 DYNLT3P51808 116 aa16.55■□□□□ 0.24
TRIM4-202ENST00000354241 CLINT1Q14677 625 aa16.55■□□□□ 0.24
TRIM4-202ENST00000354241 SSX2Q16385 188 aa16.55■□□□□ 0.24
TRIM4-202ENST00000354241 VMA21Q3ZAQ7 101 aa16.55■□□□□ 0.24
TRIM4-202ENST00000354241 MINOS1Q5TGZ0 78 aa16.55■□□□□ 0.24
TRIM4-202ENST00000354241 BAP18Q8IXM2 172 aa16.55■□□□□ 0.24
TRIM4-202ENST00000354241 VSTM2AQ8TAG5 236 aa16.55■□□□□ 0.24
TRIM4-202ENST00000354241 CLCC1Q96S66 551 aa16.55■□□□□ 0.24
TRIM4-202ENST00000354241 MINOS1-NBL1R4GNA1 71 aa16.55■□□□□ 0.24
TRIM4-202ENST00000354241 SLC25A17O43808 307 aa16.54■□□□□ 0.24
TRIM4-202ENST00000354241 LGALS7P47929 136 aa16.54■□□□□ 0.24
TRIM4-202ENST00000354241 HOXA1P49639 335 aaPredicted RBP16.54■□□□□ 0.24
TRIM4-202ENST00000354241 SULT1A1P50225 295 aa16.54■□□□□ 0.24
TRIM4-202ENST00000354241 OR5C1Q8NGR4 320 aa16.54■□□□□ 0.24
TRIM4-202ENST00000354241 SCARB1Q8WTV0 552 aa16.54■□□□□ 0.24
TRIM4-202ENST00000354241 JTBO76095 146 aa16.53■□□□□ 0.24
TRIM4-202ENST00000354241 HSPE1P61604 102 aaKnown RBP16.53■□□□□ 0.24
TRIM4-202ENST00000354241 EIF5AP63241 154 aaKnown RBP16.53■□□□□ 0.24
TRIM4-202ENST00000354241 PDLIM3Q53GG5 364 aaPredicted RBP16.53■□□□□ 0.24
TRIM4-202ENST00000354241 Q5PR19 223 aa16.53■□□□□ 0.24
TRIM4-202ENST00000354241 C17orf50Q8WW18 174 aa16.53■□□□□ 0.24
TRIM4-202ENST00000354241 OR4C12Q96R67 309 aa16.53■□□□□ 0.24
TRIM4-202ENST00000354241 HINT2Q9BX68 163 aa16.53■□□□□ 0.24
TRIM4-202ENST00000354241 TBL2Q9Y4P3 447 aaKnown RBP16.53■□□□□ 0.24
TRIM4-202ENST00000354241 CELSR2Q9HCU4 2923 aa16.53■□□□□ 0.24
TRIM4-202ENST00000354241 PTPN13Q12923 2485 aa16.53■□□□□ 0.24
TRIM4-202ENST00000354241 BORCS7-ASMTA0A0B4J1R7 106 aa16.53■□□□□ 0.24
TRIM4-202ENST00000354241 B4DSR2 109 aa16.53■□□□□ 0.24
TRIM4-202ENST00000354241 OPN1MWP04001 364 aa16.53■□□□□ 0.24
TRIM4-202ENST00000354241 FGF2P09038 288 aa16.53■□□□□ 0.24
TRIM4-202ENST00000354241 OPN1MW2P0DN77 364 aa16.53■□□□□ 0.24
TRIM4-202ENST00000354241 OPN1MW3P0DN78 364 aa16.53■□□□□ 0.24
TRIM4-202ENST00000354241 CNTFRP26992 372 aa16.53■□□□□ 0.24
TRIM4-202ENST00000354241 OR1S2Q8NGQ3 325 aa16.53■□□□□ 0.24
TRIM4-202ENST00000354241 OR4A5Q8NH83 315 aa16.53■□□□□ 0.24
TRIM4-202ENST00000354241 TMEM167AQ8TBQ9 72 aa16.53■□□□□ 0.24
TRIM4-202ENST00000354241 PCNPQ8WW12 178 aaKnown RBP16.53■□□□□ 0.24
TRIM4-202ENST00000354241 HEYLQ9NQ87 328 aaPredicted RBP16.53■□□□□ 0.24
TRIM4-202ENST00000354241 FKBP11Q9NYL4 201 aa16.53■□□□□ 0.24
TRIM4-202ENST00000354241 STRAPQ9Y3F4 350 aaKnown RBP16.53■□□□□ 0.24
TRIM4-202ENST00000354241 ASH1LQ9NR48 2969 aaKnown RBP16.52■□□□□ 0.24
TRIM4-202ENST00000354241 VPS13CQ709C8 3753 aa16.52■□□□□ 0.24
TRIM4-202ENST00000354241 CCDC144NLQ6NUI1 221 aa16.52■□□□□ 0.23
TRIM4-202ENST00000354241 DYNAPQ8N1N2 210 aa16.52■□□□□ 0.23
TRIM4-202ENST00000354241 CFHR4Q92496 578 aa16.52■□□□□ 0.23
TRIM4-202ENST00000354241 PHYHIPLQ96FC7 376 aa16.52■□□□□ 0.23
TRIM4-202ENST00000354241 HIPK2Q9H2X6 1198 aa16.52■□□□□ 0.23
TRIM4-202ENST00000354241 A0A096LNT2 108 aa16.51■□□□□ 0.23
TRIM4-202ENST00000354241 VENTXO95231 258 aa16.51■□□□□ 0.23
TRIM4-202ENST00000354241 CD1BP29016 333 aa16.51■□□□□ 0.23
TRIM4-202ENST00000354241 RPL8P62917 257 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms