RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 SPATA46Q5T0L3 261 aa11.87□□□□□ -0.51
RLIM-202ENST00000349225 AMMECR1LQ6DCA0 310 aa11.87□□□□□ -0.51
RLIM-202ENST00000349225 MKXQ8IYA7 352 aa11.87□□□□□ -0.51
RLIM-202ENST00000349225 NUDT11Q96G61 164 aa11.87□□□□□ -0.51
RLIM-202ENST00000349225 TET2Q6N021 2002 aaPredicted RBP11.86□□□□□ -0.51
RLIM-202ENST00000349225 LRP5LA4QPB2 252 aa11.86□□□□□ -0.51
RLIM-202ENST00000349225 C2orf70A6NJV1 201 aa11.86□□□□□ -0.51
RLIM-202ENST00000349225 CCL3P10147 92 aa11.86□□□□□ -0.51
RLIM-202ENST00000349225 GLB1P16278 677 aa11.86□□□□□ -0.51
RLIM-202ENST00000349225 CCNOP22674 350 aa11.86□□□□□ -0.51
RLIM-202ENST00000349225 RHOBP62745 196 aa11.86□□□□□ -0.51
RLIM-202ENST00000349225 TREML4Q6UXN2 200 aa11.86□□□□□ -0.51
RLIM-202ENST00000349225 CPT1CQ8TCG5 803 aa11.86□□□□□ -0.51
RLIM-202ENST00000349225 BCL2L2Q92843 193 aaPredicted RBP11.86□□□□□ -0.51
RLIM-202ENST00000349225 FAM181BA6NEQ2 426 aa11.86□□□□□ -0.51
RLIM-202ENST00000349225 ZNF716A6NP11 495 aa11.86□□□□□ -0.51
RLIM-202ENST00000349225 SAP30O75446 220 aa11.86□□□□□ -0.51
RLIM-202ENST00000349225 ZFAND5O76080 213 aa11.86□□□□□ -0.51
RLIM-202ENST00000349225 CA6P23280 308 aa11.86□□□□□ -0.51
RLIM-202ENST00000349225 GATA2P23769 480 aaPredicted RBP11.86□□□□□ -0.51
RLIM-202ENST00000349225 OTX2P32243 289 aa11.86□□□□□ -0.51
RLIM-202ENST00000349225 HYAL1Q12794 435 aa11.86□□□□□ -0.51
RLIM-202ENST00000349225 TBR1Q16650 682 aa11.86□□□□□ -0.51
RLIM-202ENST00000349225 PRR31Q5SQ13 230 aa11.86□□□□□ -0.51
RLIM-202ENST00000349225 Q6P435 159 aa11.86□□□□□ -0.51
RLIM-202ENST00000349225 C19orf35Q6ZS72 473 aa11.86□□□□□ -0.51
RLIM-202ENST00000349225 AKIRIN1Q9H9L7 192 aaPredicted RBP11.86□□□□□ -0.51
RLIM-202ENST00000349225 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.86□□□□□ -0.51
RLIM-202ENST00000349225 ZNF503-AS2A6NEH8 195 aa11.85□□□□□ -0.51
RLIM-202ENST00000349225 SSTR5P35346 364 aa11.85□□□□□ -0.51
RLIM-202ENST00000349225 FOXE3Q13461 319 aa11.85□□□□□ -0.51
RLIM-202ENST00000349225 OR4A47Q6IF82 309 aa11.85□□□□□ -0.51
RLIM-202ENST00000349225 ZNF808Q8N4W9 903 aaPredicted RBP11.85□□□□□ -0.51
RLIM-202ENST00000349225 BADQ92934 168 aa11.85□□□□□ -0.51
RLIM-202ENST00000349225 SARAFQ96BY9 339 aa11.85□□□□□ -0.51
RLIM-202ENST00000349225 PRRG4Q9BZD6 226 aa11.85□□□□□ -0.51
RLIM-202ENST00000349225 PRDM14Q9GZV8 571 aa11.85□□□□□ -0.51
RLIM-202ENST00000349225 CHTOPQ9Y3Y2 248 aaKnown RBP11.85□□□□□ -0.51
RLIM-202ENST00000349225 R4GN57 208 aa11.85□□□□□ -0.51
RLIM-202ENST00000349225 CACNA1DQ01668 2161 aa11.85□□□□□ -0.51
RLIM-202ENST00000349225 C9JCJ5 164 aa11.85□□□□□ -0.51
RLIM-202ENST00000349225 CA1P00915 261 aaPredicted RBP11.85□□□□□ -0.51
RLIM-202ENST00000349225 NGFP01138 241 aa11.85□□□□□ -0.51
RLIM-202ENST00000349225 RIPPLY3P57055 190 aa11.85□□□□□ -0.51
RLIM-202ENST00000349225 C11orf52Q96A22 123 aa11.85□□□□□ -0.51
RLIM-202ENST00000349225 TRGV10A0A0A0MS01 117 aa11.85□□□□□ -0.51
RLIM-202ENST00000349225 OR8B3Q8NGG8 313 aa11.85□□□□□ -0.51
RLIM-202ENST00000349225 BORCS7Q96B45 105 aa11.85□□□□□ -0.51
RLIM-202ENST00000349225 OR8B2Q96RD0 313 aa11.85□□□□□ -0.51
RLIM-202ENST00000349225 GGTLC1Q9BX51 225 aa11.85□□□□□ -0.51
RLIM-202ENST00000349225 NCOR1P1Q9H4R4 102 aa11.85□□□□□ -0.51
RLIM-202ENST00000349225 MUC21A0A0G2JKD1 596 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 MUC21A0A140T8X8 626 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 CXorf1O96002 111 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 FKBP2P26885 142 aaKnown RBP11.84□□□□□ -0.51
RLIM-202ENST00000349225 GCHFRP30047 84 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 CLDN18P56856 261 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 CENPWQ5EE01 88 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 MUC21Q5SSG8 566 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 GDF5OSQ5U4N7 250 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 SYT13Q7L8C5 426 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 ZNF596Q8TC21 504 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 PTPRBP23467 1997 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 AHRRA9YTQ3 701 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 NEURL1O76050 574 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 LIFP15018 202 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 CCL7P80098 99 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 PMCHL1Q16048 86 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 BVES-AS1Q5T3Y7 98 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 RARRES3Q9UL19 164 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 MT-ND6P03923 174 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 CA7P43166 264 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 SELENOVP59797 346 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 ZNF497Q6ZNH5 498 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 FAM58AQ8N1B3 248 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 SSMEM1Q8WWF3 244 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 FAM168AQ92567 244 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 MS4A5Q9H3V2 200 aa11.84□□□□□ -0.51
RLIM-202ENST00000349225 HCFC1P51610 2035 aa11.83□□□□□ -0.51
RLIM-202ENST00000349225 PRSS46E5RG02 174 aa11.83□□□□□ -0.52
RLIM-202ENST00000349225 MRPS21P82921 87 aaKnown RBP11.83□□□□□ -0.52
RLIM-202ENST00000349225 PQLC2Q6ZP29 291 aa11.83□□□□□ -0.52
RLIM-202ENST00000349225 Q6ZS52 159 aa11.83□□□□□ -0.52
RLIM-202ENST00000349225 SLC24A4Q8NFF2 622 aa11.83□□□□□ -0.52
RLIM-202ENST00000349225 TXNDC17Q9BRA2 123 aa11.83□□□□□ -0.52
RLIM-202ENST00000349225 RPH3ALQ9UNE2 315 aa11.83□□□□□ -0.52
RLIM-202ENST00000349225 TRAV8-6A0A0B4J262 113 aa11.83□□□□□ -0.52
RLIM-202ENST00000349225 IGLV2-8P01709 118 aa11.83□□□□□ -0.52
RLIM-202ENST00000349225 OPRK1P41145 380 aa11.83□□□□□ -0.52
RLIM-202ENST00000349225 WFDC8Q8IUA0 241 aa11.83□□□□□ -0.52
RLIM-202ENST00000349225 SPACA3Q8IXA5 215 aa11.83□□□□□ -0.52
RLIM-202ENST00000349225 URB1-AS1Q96HZ7 61 aa11.83□□□□□ -0.52
RLIM-202ENST00000349225 CLEC5AQ9NY25 188 aa11.83□□□□□ -0.52
RLIM-202ENST00000349225 SELENOKQ9Y6D0 94 aa11.83□□□□□ -0.52
RLIM-202ENST00000349225 NUDT3O95989 172 aa11.83□□□□□ -0.52
RLIM-202ENST00000349225 CGAP01215 116 aa11.83□□□□□ -0.52
RLIM-202ENST00000349225 AMY1AP04745 511 aa11.83□□□□□ -0.52
RLIM-202ENST00000349225 RPS20P60866 119 aaKnown RBP11.83□□□□□ -0.52
RLIM-202ENST00000349225 WDR73Q6P4I2 378 aa11.83□□□□□ -0.52
RLIM-202ENST00000349225 AAED1Q7RTV5 226 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms