RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 RNF24Q9Y225 148 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 RBM7Q9Y580 266 aaKnown RBP8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 DNAH14Q0VDD8 3507 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 CACNA1EQ15878 2313 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 BMPR1BO00238 502 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 ZG16O60844 167 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 RAMP3O60896 148 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 WISP2O76076 250 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 PSG1P11464 419 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 OPRK1P41145 380 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 GPM6AP51674 278 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 SELENOVP59797 346 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 MAJINQ3KP22 176 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 SCCPDHQ8NBX0 429 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 ZBTB34Q8NCN2 500 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 ZNF439Q8NDP4 499 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 SAP25Q8TEE9 199 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 OCIAD1Q9NX40 245 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 KCNS2Q9ULS6 477 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 CDH23Q9H251 3354 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 TRAV24A0A0B4J272 114 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 ODAMA1E959 279 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 AMY1AP04745 511 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 LINC00869P0C866 280 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 IGLL1P15814 213 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 SRIP30626 198 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 ARR3P36575 388 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 CLDN18P56856 261 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 RPL31P62899 125 aaKnown RBP8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 GCSAMLQ5JQS6 135 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 PRR27Q6MZM9 219 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 YRDCQ86U90 279 aaKnown RBP8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 ATOH7Q8N100 152 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 DRAM1Q8N682 238 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 AKIRIN1Q9H9L7 192 aaPredicted RBP8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 YTHDF2Q9Y5A9 579 aaKnown RBP8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 CDIPTO14735 213 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 MRPL33O75394 65 aaKnown RBP8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 FOLR3P41439 243 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 ARF6P62330 175 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 GNG3P63215 75 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 KIAA1644Q3SXP7 199 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 OR4A47Q6IF82 309 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 Q8IYB0 196 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 FAM58AQ8N1B3 248 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 DEFB125Q8N687 156 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 OR8B3Q8NGG8 313 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 IL1F10Q8WWZ1 152 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 BCL2L2Q92843 193 aaPredicted RBP8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 OR8B2Q96RD0 313 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 CDX2Q99626 313 aaPredicted RBP8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 OSTCQ9NRP0 149 aa8.61□□□□□ -1.03
CHRNA1-202ENST00000348749 UNC80Q8N2C7 3258 aa8.6□□□□□ -1.03
CHRNA1-202ENST00000348749 ANKRD30BLA7E2S9 258 aa8.6□□□□□ -1.03
CHRNA1-202ENST00000348749 G3V3Y1 287 aa8.6□□□□□ -1.03
CHRNA1-202ENST00000348749 RAB29O14966 203 aa8.6□□□□□ -1.03
CHRNA1-202ENST00000348749 NBEAP1P0C6P0 100 aa8.6□□□□□ -1.03
CHRNA1-202ENST00000348749 AREGP15514 252 aa8.6□□□□□ -1.03
CHRNA1-202ENST00000348749 EDDM3BP56851 147 aa8.6□□□□□ -1.03
CHRNA1-202ENST00000348749 LCN12Q6JVE5 192 aa8.6□□□□□ -1.03
CHRNA1-202ENST00000348749 FAM71F2Q6NXP2 309 aa8.6□□□□□ -1.03
CHRNA1-202ENST00000348749 VHLLQ6RSH7 139 aa8.6□□□□□ -1.03
CHRNA1-202ENST00000348749 FAM19A2Q8N3H0 131 aa8.6□□□□□ -1.03
CHRNA1-202ENST00000348749 ZDHHC16Q969W1 377 aa8.6□□□□□ -1.03
CHRNA1-202ENST00000348749 OR2D2Q9H210 308 aa8.6□□□□□ -1.03
CHRNA1-202ENST00000348749 DLL3Q9NYJ7 618 aa8.6□□□□□ -1.03
CHRNA1-202ENST00000348749 FAM181BA6NEQ2 426 aa8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 C15orf62A8K5M9 175 aa8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 J3QW42 95 aa8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 RRHO14718 337 aa8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 NTF3P20783 257 aa8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 GCHFRP30047 84 aa8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 G6PCP35575 357 aa8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 ARF1P84077 181 aaKnown RBP8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 ZNF596Q8TC21 504 aa8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 C18orf32Q8TCD1 76 aa8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 ST20Q9HBF5 79 aa8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 ARL2-SNX15V9GYD0 113 aa8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 J3QT63 122 aa8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 MT-CO2P00403 227 aa8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 UBE2G1P62253 170 aa8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 BVES-AS1Q5T3Y7 98 aa8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 LYSMD4Q5XG99 296 aa8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 VWA1Q6PCB0 445 aa8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 RASL11AQ6T310 242 aa8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 TCF24Q7RTU0 167 aa8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 C1RLQ9NZP8 487 aa8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 BOKQ9UMX3 212 aaPredicted RBP8.59□□□□□ -1.03
CHRNA1-202ENST00000348749 TMEM265A0A087WTH1 108 aa8.58□□□□□ -1.04
CHRNA1-202ENST00000348749 SMIM27A0A1W2PRY6 76 aa8.58□□□□□ -1.04
CHRNA1-202ENST00000348749 C5orf49A4QMS7 147 aa8.58□□□□□ -1.04
CHRNA1-202ENST00000348749 C2orf70A6NJV1 201 aa8.58□□□□□ -1.04
CHRNA1-202ENST00000348749 K7ESF4 209 aa8.58□□□□□ -1.04
CHRNA1-202ENST00000348749 NDUFS8O00217 210 aa8.58□□□□□ -1.04
CHRNA1-202ENST00000348749 SYNGR1O43759 233 aa8.58□□□□□ -1.04
CHRNA1-202ENST00000348749 CLDN14O95500 239 aa8.58□□□□□ -1.04
CHRNA1-202ENST00000348749 APCSP02743 223 aa8.58□□□□□ -1.04
CHRNA1-202ENST00000348749 APOBEC3AP31941 199 aaPredicted RBP8.58□□□□□ -1.04
CHRNA1-202ENST00000348749 CXCL12P48061 93 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms