RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 MPDZO75970 2070 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 IGKV1-9A0A0C4DH69 117 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 OR4C46A6NHA9 309 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 CRXO43186 299 aaPredicted RBP9.22□□□□□ -0.93
CLCN6-202ENST00000346436 UMODP07911 640 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 RFPL3SP0C7P2 107 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 NTF3P20783 257 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 CEBPDP49716 269 aaPredicted RBP9.22□□□□□ -0.93
CLCN6-202ENST00000346436 LSM10Q969L4 123 aaKnown RBP9.22□□□□□ -0.93
CLCN6-202ENST00000346436 MIEN1Q9BRT3 115 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 C5orf63A6NC05 138 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 G3V3Q6 166 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 CDS2O95674 445 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 RIGQ13278 110 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 PPP1R27Q86WC6 154 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 ZNF383Q8NA42 475 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 SLC24A4Q8NFF2 622 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 SLC25A33Q9BSK2 321 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 REG4Q9BYZ8 158 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 IGKV1D-8A0A087WSZ0 117 aa9.21□□□□□ -0.93
CLCN6-202ENST00000346436 WNT2P09544 360 aa9.21□□□□□ -0.93
CLCN6-202ENST00000346436 HTN3P15516 51 aa9.21□□□□□ -0.93
CLCN6-202ENST00000346436 BPIFA4PQ86YQ2 179 aa9.21□□□□□ -0.93
CLCN6-202ENST00000346436 MRPL30Q8TCC3 161 aaKnown RBP9.21□□□□□ -0.93
CLCN6-202ENST00000346436 ZDHHC11Q9H8X9 412 aa9.21□□□□□ -0.93
CLCN6-202ENST00000346436 LYRM2Q9NU23 88 aaPredicted RBP9.21□□□□□ -0.93
CLCN6-202ENST00000346436 PHF3Q92576 2039 aaKnown RBP9.21□□□□□ -0.93
CLCN6-202ENST00000346436 A0A0G2JMM0 328 aa9.21□□□□□ -0.93
CLCN6-202ENST00000346436 A0A1W2PPB8 328 aa9.21□□□□□ -0.93
CLCN6-202ENST00000346436 A0A1W2PRS3 328 aa9.21□□□□□ -0.93
CLCN6-202ENST00000346436 KIR3DP1A8MWS1 328 aa9.21□□□□□ -0.93
CLCN6-202ENST00000346436 CELA3AP09093 270 aa9.21□□□□□ -0.93
CLCN6-202ENST00000346436 TMEM187Q14656 261 aa9.21□□□□□ -0.93
CLCN6-202ENST00000346436 C10orf128Q5T292 105 aa9.21□□□□□ -0.94
CLCN6-202ENST00000346436 FAM78BQ5VT40 261 aa9.21□□□□□ -0.94
CLCN6-202ENST00000346436 ZNF818PQ6ZRF7 136 aa9.21□□□□□ -0.94
CLCN6-202ENST00000346436 TMEM222Q9H0R3 208 aa9.21□□□□□ -0.94
CLCN6-202ENST00000346436 NPIPB13A6NJU9 1138 aa9.21□□□□□ -0.94
CLCN6-202ENST00000346436 CEACAM18A8MTB9 384 aa9.21□□□□□ -0.94
CLCN6-202ENST00000346436 NPIPB4C9JG80 1138 aa9.21□□□□□ -0.94
CLCN6-202ENST00000346436 EFNA2O43921 213 aa9.21□□□□□ -0.94
CLCN6-202ENST00000346436 MELTFP08582 738 aa9.21□□□□□ -0.94
CLCN6-202ENST00000346436 MCRIP2Q9BUT9 160 aaKnown RBP9.21□□□□□ -0.94
CLCN6-202ENST00000346436 NPIPB7O75200 414 aa9.21□□□□□ -0.94
CLCN6-202ENST00000346436 PMS2P11Q13670 270 aa9.21□□□□□ -0.94
CLCN6-202ENST00000346436 TRAPPC1Q9Y5R8 145 aa9.21□□□□□ -0.94
CLCN6-202ENST00000346436 DENND4CQ5VZ89 1909 aa9.2□□□□□ -0.94
CLCN6-202ENST00000346436 PLXNA2O75051 1894 aa9.2□□□□□ -0.94
CLCN6-202ENST00000346436 TGIF2-C20orf24A0A0A6YYL0 155 aa9.2□□□□□ -0.94
CLCN6-202ENST00000346436 MOSP00540 346 aa9.2□□□□□ -0.94
CLCN6-202ENST00000346436 STHQ8IWL8 128 aa9.2□□□□□ -0.94
CLCN6-202ENST00000346436 TMEM54Q969K7 222 aa9.2□□□□□ -0.94
CLCN6-202ENST00000346436 HIST1H2BAQ96A08 127 aa9.2□□□□□ -0.94
CLCN6-202ENST00000346436 LYZL4Q96KX0 146 aa9.2□□□□□ -0.94
CLCN6-202ENST00000346436 PACRGQ96M98 296 aaPredicted RBP9.2□□□□□ -0.94
CLCN6-202ENST00000346436 PLXNB3Q9ULL4 1909 aa9.2□□□□□ -0.94
CLCN6-202ENST00000346436 INTS1Q8N201 2190 aaKnown RBP9.2□□□□□ -0.94
CLCN6-202ENST00000346436 TRGC2P03986 189 aa9.2□□□□□ -0.94
CLCN6-202ENST00000346436 ATP5IP56385 69 aaPredicted RBP9.2□□□□□ -0.94
CLCN6-202ENST00000346436 BIVMQ86UB2 503 aa9.2□□□□□ -0.94
CLCN6-202ENST00000346436 WNT5BQ9H1J7 359 aa9.2□□□□□ -0.94
CLCN6-202ENST00000346436 PARD6AQ9NPB6 346 aa9.2□□□□□ -0.94
CLCN6-202ENST00000346436 LOC102723971A0A1B0GUV8 181 aa9.2□□□□□ -0.94
CLCN6-202ENST00000346436 PITX3O75364 302 aa9.2□□□□□ -0.94
CLCN6-202ENST00000346436 SUCLG1P53597 346 aaKnown RBP9.2□□□□□ -0.94
CLCN6-202ENST00000346436 C11orf42Q8N5U0 333 aa9.2□□□□□ -0.94
CLCN6-202ENST00000346436 QTRT1Q9BXR0 403 aaKnown RBP9.2□□□□□ -0.94
CLCN6-202ENST00000346436 TRAV40A0A0B4J280 105 aa9.2□□□□□ -0.94
CLCN6-202ENST00000346436 COL8A1P27658 744 aa9.2□□□□□ -0.94
CLCN6-202ENST00000346436 IL36RNQ9UBH0 155 aa9.2□□□□□ -0.94
CLCN6-202ENST00000346436 PLXNA4Q9HCM2 1894 aa9.2□□□□□ -0.94
CLCN6-202ENST00000346436 PAGE4O60829 102 aa9.19□□□□□ -0.94
CLCN6-202ENST00000346436 IGHV1-2P23083 117 aa9.19□□□□□ -0.94
CLCN6-202ENST00000346436 BSXQ3C1V8 233 aa9.19□□□□□ -0.94
CLCN6-202ENST00000346436 SELENOHQ8IZQ5 122 aaKnown RBP9.19□□□□□ -0.94
CLCN6-202ENST00000346436 ZNF645Q8N7E2 425 aa9.19□□□□□ -0.94
CLCN6-202ENST00000346436 TMEM116Q8NCL8 245 aa9.19□□□□□ -0.94
CLCN6-202ENST00000346436 PRSS3P2Q8NHM4 247 aa9.19□□□□□ -0.94
CLCN6-202ENST00000346436 SSMEM1Q8WWF3 244 aa9.19□□□□□ -0.94
CLCN6-202ENST00000346436 CEP350Q5VT06 3117 aa9.19□□□□□ -0.94
CLCN6-202ENST00000346436 P01737 135 aa9.19□□□□□ -0.94
CLCN6-202ENST00000346436 SMIM6P0DI80 62 aa9.19□□□□□ -0.94
CLCN6-202ENST00000346436 RND3P61587 244 aa9.19□□□□□ -0.94
CLCN6-202ENST00000346436 RNF166Q96A37 237 aaPredicted RBP9.19□□□□□ -0.94
CLCN6-202ENST00000346436 RHOVQ96L33 236 aa9.19□□□□□ -0.94
CLCN6-202ENST00000346436 NOL4LQ96MY1 436 aaPredicted RBP9.19□□□□□ -0.94
CLCN6-202ENST00000346436 IGHV3-21A0A0B4J1V1 117 aa9.19□□□□□ -0.94
CLCN6-202ENST00000346436 NEURL1O76050 574 aa9.19□□□□□ -0.94
CLCN6-202ENST00000346436 MRPL13Q9BYD1 178 aaKnown RBP9.19□□□□□ -0.94
CLCN6-202ENST00000346436 DANCRP0C864 163 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 WDR25Q64LD2 544 aaPredicted RBP9.18□□□□□ -0.94
CLCN6-202ENST00000346436 GPR146Q96CH1 333 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 TMEM262E9PQX1 116 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 PGLYRP1O75594 196 aaPredicted RBP9.18□□□□□ -0.94
CLCN6-202ENST00000346436 IGKV1D-33P01593 117 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 IGKV1-33P01594 117 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 KRTDAPP60985 99 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 GALNT14Q96FL9 552 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 ZNF586Q9NXT0 402 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 SEMA5BQ9P283 1151 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms