RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 LYNX1G3V0Z9 82 aa7.59□□□□□ -1.19
ATG4A-202ENST00000345734 TNFRSF13BO14836 293 aaPredicted RBP7.59□□□□□ -1.19
ATG4A-202ENST00000345734 S1PR2O95136 353 aa7.59□□□□□ -1.19
ATG4A-202ENST00000345734 LYNX1P0DP58 116 aa7.59□□□□□ -1.19
ATG4A-202ENST00000345734 SLC25A6P12236 298 aa7.59□□□□□ -1.19
ATG4A-202ENST00000345734 NFYBP25208 207 aa7.59□□□□□ -1.19
ATG4A-202ENST00000345734 G6PCP35575 357 aa7.59□□□□□ -1.19
ATG4A-202ENST00000345734 CAV2P51636 162 aa7.59□□□□□ -1.19
ATG4A-202ENST00000345734 PAX9P55771 341 aa7.59□□□□□ -1.19
ATG4A-202ENST00000345734 EWSR1Q01844 656 aaKnown RBP eCLIP7.59□□□□□ -1.19
ATG4A-202ENST00000345734 CATR1Q13166 79 aa7.59□□□□□ -1.19
ATG4A-202ENST00000345734 RPL39P5Q59GN2 51 aa7.59□□□□□ -1.19
ATG4A-202ENST00000345734 ODF3L1Q8IXM7 274 aa7.59□□□□□ -1.19
ATG4A-202ENST00000345734 IFI27L2Q9H2X8 130 aa7.59□□□□□ -1.19
ATG4A-202ENST00000345734 SIRT7Q9NRC8 400 aa7.59□□□□□ -1.19
ATG4A-202ENST00000345734 KRASP01116 189 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 OR8U8P0C7N1 319 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 BMI1P35226 326 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 VAMP2P63027 116 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 CT45A1Q5HYN5 189 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 PRAMEF5Q5TYX0 476 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 NCR3LG1Q68D85 454 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 ZNF66Q6ZN08 573 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 CT45A3Q8NHU0 189 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 NOL4LQ96MY1 436 aaPredicted RBP7.58□□□□□ -1.2
ATG4A-202ENST00000345734 LYRM2Q9NU23 88 aaPredicted RBP7.58□□□□□ -1.2
ATG4A-202ENST00000345734 ASH1LQ9NR48 2969 aaKnown RBP7.58□□□□□ -1.2
ATG4A-202ENST00000345734 CACNA1BQ00975 2339 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 USP24Q9UPU5 2620 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 PIGBOS1A0A0B4J2F0 54 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 IGHV1-69-2A0A0G2JMI3 117 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 COLCA2A8K830 154 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 M0R1X1 148 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 DLEU1O43261 78 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 GAPDHP04406 335 aaKnown RBP7.58□□□□□ -1.2
ATG4A-202ENST00000345734 FAM157CP0CG43 387 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 GNLYP22749 145 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 COL8A2P25067 703 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 S100A2P29034 98 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 DUTP33316 252 aaKnown RBP7.58□□□□□ -1.2
ATG4A-202ENST00000345734 TMEM252Q8N6L7 170 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 CORO2AQ92828 525 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 HSD17B10Q99714 261 aaKnown RBP7.58□□□□□ -1.2
ATG4A-202ENST00000345734 TMEM204Q9BSN7 226 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 ABHD14AQ9BUJ0 271 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 SMCO4Q9NRQ5 59 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 IDI2-AS1Q9NZ38 188 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 CTSZQ9UBR2 303 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 MMP24Q9Y5R2 645 aa7.58□□□□□ -1.2
ATG4A-202ENST00000345734 SPTAN1Q13813 2472 aaKnown RBP7.57□□□□□ -1.2
ATG4A-202ENST00000345734 MALRD1Q5VYJ5 2156 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 H3BP45 60 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 FGF16O43320 207 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 ZG16O60844 167 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 JTBO76095 146 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 CST7O76096 145 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 P0C879 139 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 IAPPP10997 89 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 SRSF3P84103 164 aaKnown RBP7.57□□□□□ -1.2
ATG4A-202ENST00000345734 CD69Q07108 199 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 CLINT1Q14677 625 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 MRPL52Q86TS9 123 aaKnown RBP7.57□□□□□ -1.2
ATG4A-202ENST00000345734 UBAC2Q8NBM4 344 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 C22orf15Q8WYQ4 148 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 RBMXL1Q96E39 390 aaKnown RBP7.57□□□□□ -1.2
ATG4A-202ENST00000345734 MALSU1Q96EH3 234 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 SEC11CQ9BY50 192 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 LINC00574Q9H8X3 128 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 ZNRD1Q9P1U0 126 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 FLNCQ14315 2725 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 TET2Q6N021 2002 aaPredicted RBP7.57□□□□□ -1.2
ATG4A-202ENST00000345734 AKAP6Q13023 2319 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 hADV38S2A0JD32 116 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 TMEM8BA6NDV4 472 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 FCGR3BO75015 233 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 MT-ND4LP03901 98 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 RD3LP0DJH9 198 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 MMP9P14780 707 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 CCL3L1P16619 93 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 RPL31P62899 125 aaKnown RBP7.57□□□□□ -1.2
ATG4A-202ENST00000345734 EIF5AP63241 154 aaKnown RBP7.57□□□□□ -1.2
ATG4A-202ENST00000345734 PYY3Q5JQD4 70 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 TMEM200BQ69YZ2 307 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 SLC25A24Q6NUK1 477 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 TMEM217Q8N7C4 229 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 ZNF439Q8NDP4 499 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 OR1S2Q8NGQ3 325 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 H1FXQ92522 213 aaKnown RBP7.57□□□□□ -1.2
ATG4A-202ENST00000345734 NDUFAF3Q9BU61 184 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 ARV1Q9H2C2 271 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 RALYQ9UKM9 306 aaKnown RBP7.57□□□□□ -1.2
ATG4A-202ENST00000345734 LINC00312Q9Y6C7 94 aa7.57□□□□□ -1.2
ATG4A-202ENST00000345734 ZFYVE26Q68DK2 2539 aa7.56□□□□□ -1.2
ATG4A-202ENST00000345734 SAA2-SAA4A0A096LPE2 208 aa7.56□□□□□ -1.2
ATG4A-202ENST00000345734 A0A1W2PN81 502 aa7.56□□□□□ -1.2
ATG4A-202ENST00000345734 A0A1W2PPQ1 181 aa7.56□□□□□ -1.2
ATG4A-202ENST00000345734 DVL1O14640 695 aa7.56□□□□□ -1.2
ATG4A-202ENST00000345734 NDUFB3O43676 98 aa7.56□□□□□ -1.2
ATG4A-202ENST00000345734 SYNGR2O43760 224 aa7.56□□□□□ -1.2
ATG4A-202ENST00000345734 SAA2P0DJI9 122 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms