RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 MAS1LP35410 378 aa9.35□□□□□ -0.91
SNCA-202ENST00000345009 BRWD1-AS2P59051 145 aa9.35□□□□□ -0.91
SNCA-202ENST00000345009 GNB1P62873 340 aa9.35□□□□□ -0.91
SNCA-202ENST00000345009 DHODHQ02127 395 aa9.35□□□□□ -0.91
SNCA-202ENST00000345009 FXYD3Q14802 87 aa9.35□□□□□ -0.91
SNCA-202ENST00000345009 PRSS8Q16651 343 aa9.35□□□□□ -0.91
SNCA-202ENST00000345009 MZT2BQ6NZ67 158 aa9.35□□□□□ -0.91
SNCA-202ENST00000345009 STPG2Q8N412 459 aa9.35□□□□□ -0.91
SNCA-202ENST00000345009 OR5AU1Q8NGC0 362 aa9.35□□□□□ -0.91
SNCA-202ENST00000345009 RBMXL1Q96E39 390 aaKnown RBP9.35□□□□□ -0.91
SNCA-202ENST00000345009 TMEM68Q96MH6 324 aa9.35□□□□□ -0.91
SNCA-202ENST00000345009 TSC22D3Q99576 134 aa9.35□□□□□ -0.91
SNCA-202ENST00000345009 SDHCQ99643 169 aaPredicted RBP9.35□□□□□ -0.91
SNCA-202ENST00000345009 RTBDNQ9BSG5 229 aaPredicted RBP9.35□□□□□ -0.91
SNCA-202ENST00000345009 PARP11Q9NR21 331 aa9.35□□□□□ -0.91
SNCA-202ENST00000345009 TPSG1Q9NRR2 321 aa9.35□□□□□ -0.91
SNCA-202ENST00000345009 PLXNB1O43157 2135 aa9.35□□□□□ -0.91
SNCA-202ENST00000345009 IGHV7-81A0A0B4J1V7 117 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 MARCH11A6NNE9 402 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 FCN1O00602 326 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 FBXO24O75426 580 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 SNAPC5O75971 98 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 KBTBD11O94819 623 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 KRASP01116 189 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 CRYGBP07316 175 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 SAA1P0DJI8 122 aaPredicted RBP9.34□□□□□ -0.91
SNCA-202ENST00000345009 POU2AF1Q16633 256 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 TRIM16LQ309B1 348 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 TMEM95Q3KNT9 176 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 TEX38Q6PEX7 206 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 SSX9Q7RTT3 188 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 CADM3Q8N126 398 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 TMEM167AQ8TBQ9 72 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 ARPC1AQ92747 370 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 R3HDM4Q96D70 268 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 SPIN2AQ99865 258 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 SPIN2BQ9BPZ2 258 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 HSPB9Q9BQS6 159 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 C5orf66Q9H5L9 145 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 FKBP11Q9NYL4 201 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 BET1LQ9NYM9 111 aa9.34□□□□□ -0.91
SNCA-202ENST00000345009 TRAV41A0A0B4J266 112 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 CRYM-AS1A6NIL9 109 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 LINC01548A6NM66 108 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 EREGO14944 169 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 LYRM1O43325 122 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 S1PR2O95136 353 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 OPN1MWP04001 364 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 FGF2P09038 288 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 OPN1MW2P0DN77 364 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 OPN1MW3P0DN78 364 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 AKR1C4P17516 323 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 RPL8P62917 257 aaKnown RBP9.33□□□□□ -0.92
SNCA-202ENST00000345009 SRPXP78539 464 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 TNXAQ16473 311 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 ZNF585BQ52M93 769 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 AKIRIN2Q53H80 203 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 TMEM128Q5BJH2 165 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 OR4A47Q6IF82 309 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 TMEM65Q6PI78 240 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 H2BFWTQ7Z2G1 175 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 TMED4Q7Z7H5 227 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 VKORC1L1Q8N0U8 176 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 PUSL1Q8N0Z8 303 aaKnown RBP9.33□□□□□ -0.92
SNCA-202ENST00000345009 SGMS2Q8NHU3 365 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 GRPEL2Q8TAA5 225 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 MRGPRFQ96AM1 343 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 RRNAD1Q96FB5 475 aaKnown RBP9.33□□□□□ -0.92
SNCA-202ENST00000345009 NOL4LQ96MY1 436 aaPredicted RBP9.33□□□□□ -0.92
SNCA-202ENST00000345009 PHB2Q99623 299 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 COMMD5Q9GZQ3 224 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 NAA60Q9H7X0 242 aa9.33□□□□□ -0.92
SNCA-202ENST00000345009 ZNF430Q9H8G1 570 aaPredicted RBP9.33□□□□□ -0.92
SNCA-202ENST00000345009 ATP6V0E1O15342 81 aa9.32□□□□□ -0.92
SNCA-202ENST00000345009 UPK1BO75841 260 aa9.32□□□□□ -0.92
SNCA-202ENST00000345009 NDUFB6O95139 128 aa9.32□□□□□ -0.92
SNCA-202ENST00000345009 ELANEP08246 267 aa9.32□□□□□ -0.92
SNCA-202ENST00000345009 HLA-GP17693 338 aa9.32□□□□□ -0.92
SNCA-202ENST00000345009 RAB25P57735 213 aa9.32□□□□□ -0.92
SNCA-202ENST00000345009 DEFA1P59665 94 aa9.32□□□□□ -0.92
SNCA-202ENST00000345009 DEFA3P59666 94 aa9.32□□□□□ -0.92
SNCA-202ENST00000345009 UBE2MP61081 183 aaKnown RBP9.32□□□□□ -0.92
SNCA-202ENST00000345009 PJVKQ0ZLH3 352 aa9.32□□□□□ -0.92
SNCA-202ENST00000345009 CXorf66Q5JRM2 361 aaPredicted RBP9.32□□□□□ -0.92
SNCA-202ENST00000345009 UNQ5815/PRO19632Q6UWF5 114 aa9.32□□□□□ -0.92
SNCA-202ENST00000345009 ZNF329Q86UD4 541 aa9.32□□□□□ -0.92
SNCA-202ENST00000345009 ZNF695Q8IW36 515 aa9.32□□□□□ -0.92
SNCA-202ENST00000345009 CENPSQ8N2Z9 138 aa9.32□□□□□ -0.92
SNCA-202ENST00000345009 RNASE11Q8TAA1 199 aaKnown RBP9.32□□□□□ -0.92
SNCA-202ENST00000345009 CITED1Q99966 193 aa9.32□□□□□ -0.92
SNCA-202ENST00000345009 TMEM222Q9H0R3 208 aa9.32□□□□□ -0.92
SNCA-202ENST00000345009 TMEM140Q9NV12 185 aa9.32□□□□□ -0.92
SNCA-202ENST00000345009 LINC00527Q9UJ94 153 aa9.32□□□□□ -0.92
SNCA-202ENST00000345009 VSIG4Q9Y279 399 aa9.32□□□□□ -0.92
SNCA-202ENST00000345009 NUBP2Q9Y5Y2 271 aa9.32□□□□□ -0.92
SNCA-202ENST00000345009 WSB1Q9Y6I7 421 aa9.32□□□□□ -0.92
SNCA-202ENST00000345009 FAM240BA0A1B0GVZ2 78 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 TCRBV4S1A1TA0A5B7 111 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 M0QZ24 198 aa9.31□□□□□ -0.92
SNCA-202ENST00000345009 UPK2O00526 184 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms