RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 ATP5L2Q7Z4Y8 100 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 OR2T8A6NH00 312 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 SMIM13P0DJ93 91 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 MC5RP33032 325 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 TMEM30BQ3MIR4 351 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 SFTPA2Q8IWL1 248 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 FADS6Q8N9I5 356 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 MRPS18CQ9Y3D5 142 aaKnown RBP4.06□□□□□ -1.76
CSMD3-203ENST00000343508 OR8A1Q8NGG7 326 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 EAF1Q96JC9 268 aaPredicted RBP4.06□□□□□ -1.76
CSMD3-203ENST00000343508 PHF3Q92576 2039 aaKnown RBP4.06□□□□□ -1.76
CSMD3-203ENST00000343508 THADAQ6YHU6 1953 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 CGAP01215 116 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 UBALD2Q8IYN6 164 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 GCSAMQ8N6F7 178 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 MESP1Q9BRJ9 268 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 VCX2Q9H322 139 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 C3orf80F5H4A9 247 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 LINC00271P0C7V0 271 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 CKS2P33552 79 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 MPV17P39210 176 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 Q6ZS49 121 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 REPIN1Q9BWE0 567 aaKnown RBP4.06□□□□□ -1.76
CSMD3-203ENST00000343508 JKAMPQ9P055 326 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 IZUMO1RA6ND01 250 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 TMEM11P17152 192 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 RPL11P62913 178 aaKnown RBP4.06□□□□□ -1.76
CSMD3-203ENST00000343508 PNKDQ8N490 385 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 FAM131CQ96AQ9 280 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 CHCHD1Q96BP2 118 aaKnown RBP4.06□□□□□ -1.76
CSMD3-203ENST00000343508 GRAMD2BQ96HH9 432 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 PRDM13Q9H4Q3 707 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 ZNF319Q9P2F9 582 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 IGHV3-13P01766 116 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 IGHV3-7P01780 117 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 PRNTQ86SH4 94 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 ABHD12Q8N2K0 398 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 SMRP1Q8NCR6 262 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 SNRNP40Q96DI7 357 aaKnown RBP4.06□□□□□ -1.76
CSMD3-203ENST00000343508 TIMD4Q96H15 378 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 ZNF714Q96N38 554 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 OSTCQ9NRP0 149 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 S100A4P26447 101 aaKnown RBP4.06□□□□□ -1.76
CSMD3-203ENST00000343508 GCHFRP30047 84 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 SCGB1D4Q6XE38 83 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 MOB3BQ86TA1 216 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 LYZL4Q96KX0 146 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 DUSP15Q9H1R2 295 aaPredicted RBP4.06□□□□□ -1.76
CSMD3-203ENST00000343508 LOC389332A0A1B0GUA5 103 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 C19orf67A6NJJ6 358 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 C9JCJ5 164 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 IFNL4K9M1U5 179 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 SLC17A3O00476 420 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 LYZP61626 148 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 RELBQ01201 579 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 KIAA1644Q3SXP7 199 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 ZNF497Q6ZNH5 498 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 TMEM171Q8WVE6 324 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 LINC00470Q9BZP3 86 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 MGST3O14880 152 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 CEBPDP49716 269 aaPredicted RBP4.06□□□□□ -1.76
CSMD3-203ENST00000343508 TFF2Q03403 129 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 AP5S1Q9NUS5 200 aa4.06□□□□□ -1.76
CSMD3-203ENST00000343508 IGLV3-32A0A0A0MS00 114 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 OR4C46A6NHA9 309 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 C1QTNF9BB2RNN3 333 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 CA7P43166 264 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 OR8B2Q96RD0 313 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 ANAPC10Q9UM13 185 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 HIST1H1AQ02539 215 aaPredicted RBP4.05□□□□□ -1.76
CSMD3-203ENST00000343508 TNXAQ16473 311 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 NEUROG1Q92886 237 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 RNF7Q9UBF6 113 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 INSIG2Q9Y5U4 225 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 DOCK11Q5JSL3 2073 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 ZNF785A8K8V0 405 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 B4E171 279 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 NUDT3O95989 172 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 TSPAN7P41732 249 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 HERVK_113P61574 105 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 TFF3Q07654 80 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 TEX38Q6PEX7 206 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 DMRTA2Q96SC8 542 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 TTTY12Q9BZ98 90 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 NRN1Q9NPD7 142 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 CLEC1BQ9P126 229 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 WNT16Q9UBV4 365 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 GDF9O60383 454 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 GNG7O60262 68 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 BMI1P35226 326 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 LINC01551Q86U37 167 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 MDP1Q86V88 176 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 FAM19A2Q8N3H0 131 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 OR4C13Q8NGP0 309 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 VOPP1Q96AW1 172 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 FZR1Q9UM11 496 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 HIGD1AQ9Y241 93 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 PRRG2O14669 202 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 UQCRFS1P47985 274 aa4.05□□□□□ -1.76
CSMD3-203ENST00000343508 ZNF137PP52743 207 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms